Hippoglossus hippoglossus (Atlantic halibut): 117770611
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Entry
117770611 CDS
T07778
Symbol
atxn1a
Name
(RefSeq) ataxin-1a
KO
K23616
ataxin 1/1L
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
117770611 (atxn1a)
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Gene cluster
GFIT
Motif
Pfam:
ATXN-1_C
AXH
Motif
Other DBs
NCBI-GeneID:
117770611
NCBI-ProteinID:
XP_034456129
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Position
11:complement(9098726..9178864)
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AA seq
808 aa
AA seq
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MKSNHERSNECLPPKKREIPACTFPSETRSITMPPASDSQRSENMAWLASVAGNESSVGG
HRSSSHSDGHHYKSLSSTSDSSTSSSSLRLVSSLPTVYTSPLSQSTVGGTVHYTQLPHNL
QFITSPYTAPYAGYISPQLLPPPPPPPPLSLSSSSHSMAAQRPSHTETASAPSQASKHDQ
HRASSGRTSMPPPSTDPHLHHTHMSTSLRTVPSTHHQGGIHLSPQSLHHHHTLGHGMSQV
LVQYMDGSNRNEDGGSRHRELHNGELERGRRFGASPEFSLSKSGNKSRDVNSSLTSYEAH
QLVLPSEYSTHDPSGLRTSVMLMHNSHGDHQLVPPRASPEKLTNCSPAHLEKGGIILGKP
VNRTSSSSNNTSSFTFPTPLSVDSLKAAVRTLSPQTVIQTTHSATEALSMGLPSSSIYPQ
APIIGYIAGGSGSQHTSISYHTSLQQHLLIPGAQPVIIPVSGGGVTTLEPVTSHMTSSTQ
ASFPSALPHTYIAASAPKGETLVTSSGSYHQVASGAVVPAQLHLPIVSAPQGLVAPSAPP
PPSNTVAPPSLPPYFIKGSIIQLADGELKRVEDLKTEDFIQSAEISNELKIDSSTVERIE
GSHTSPNVAVVQFSVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPDRTTQLLELPCTKLSV
GDVCISLTLKNLRNGSLKKTQPLELATPACVPASSHGHLKPPRAVYDTPQIFRHNEWENG
ISQRGSGNGSGGGGPNVENGDGMFGERGAVSKGQAASIPKTGRKRRWSAPEGRKVEKTEE
EPPLTLPKPSFIPHEVKISIEGRSNIGK
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgaagtccaaccatgaacgcagtaatgaatgtctgcccccaaagaagagggagatcccc
gcatgcactttcccatctgaaacccgttcaatcaccatgccacctgccagtgacagtcag
cgctcagagaacatggcctggcttgccagtgtggctgggaatgagagcagcgtgggtggg
caccgtagctccagtcattctgatgggcaccattataaatcgctctcctccacatcagac
tcttcaacctcctcttcgtcactgaggctggtctcatctcttcccacagtttatacatcc
cccttgtcacaatctacagtcggcggaactgtccattacacccaactgcctcacaatctg
cagttcataacgtcaccttacactgccccgtacgcaggctacatctcccctcaactgctc
ccacctcctcctccacctccccccctctccttgtcgtcgtcgtcccactctatggccgca
cagagaccctcacacacagagacagcctctgctccttcgcaggcctccaagcatgaccag
cacagagcgtccagtgggcggacctccatgccaccgccttctacagacccccaccttcac
catactcacatgtccacttccctacggactgtcccgtcaactcatcaccaaggaggcatt
cacctctctccccagtcgctgcaccaccatcatactttgggtcatggaatgtcccaggtt
ttggtgcagtacatggacggatccaacaggaacgaggacggtggctctagacacagagag
cttcacaatggagagctggaaaggggccggcggtttggagcatcccctgagttcagcctc
tccaagtcggggaacaaatcacgggatgtcaattcttctttgacctcttatgaggcccac
cagctggtcctgccatctgaatactctacccatgatccctcagggctgagaacctctgtt
atgctaatgcacaacagccatggagaccaccagctggtaccacccagagccagccctgag
aagctgacaaattgttcccccgcacacttggagaaaggtggcatcatcctgggcaagcca
gtcaatcgcacatcatcctcctccaataacacctcctcgttcacgtttccaacaccattg
agtgtagacagtctgaaagctgctgtacgtacactctccccccagaccgttattcagacc
actcacagtgccacagaggcactttcaatggggctcccctccagcagtatctacccccag
gcacctatcatcggttacatcgcagggggcagcggaagccagcatacgtcaatcagctac
cacaccagcctacaacaacacttactcattcctggtgcccaaccagtcataatccctgtt
agtggaggtggagtcaccacattggaacctgtaacctcccacatgacatcatccacccaa
gcttcttttcctagcgcactcccacacacgtacattgctgccagcgctcccaaaggagag
actcttgtaacctccagtggctcgtaccaccaggtcgcttcaggtgcagtggtcccagcc
cagcttcatctccccattgtttccgcgccacaaggtttggtcgctccttctgctcctcct
cccccgtccaatacggtggcgcctccctcactccccccatatttcatcaagggctccatc
atccagctggccgacggggagctgaagcgcgtggaggatctgaagacagaggacttcatc
cagagtgccgagatcagcaatgaactgaagatcgactcgtccacggtggagcgcatcgaa
ggcagccacacctcacccaacgtagctgtggttcagttctctgttggtgagcaccgtgca
caggtaagcgtggaggtcttggtggagtatcccttcttcgtcttcggccaggggtggtct
tcgtgctgcccggaccggaccacccagcttctggagctgccttgcaccaagctttctgtg
ggcgacgtttgtatttcacttaccctcaagaacctgaggaacggatctctgaagaagact
cagcccctcgagctggccaccccggcctgtgtcccagcctcaagccacgggcacctcaaa
ccccccagagctgtttatgacactccgcagatctttaggcacaacgagtgggagaatggc
atcagccagcggggaagtgggaacgggagcggaggagggggccctaatgtggaaaacggg
gatggaatgtttggggaaagaggcgcagtttctaaaggtcaggctgccagcatcccaaaa
accggcaggaagcggaggtggtctgcccctgagggtcggaaagtggagaaaaccgaagag
gagccacctttgaccctgcccaaaccttccttcatccctcacgaggtgaaaataagcatc
gagggaaggtcgaatattggcaagtga
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