Hippoglossus hippoglossus (Atlantic halibut): 117770623
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Entry
117770623 CDS
T07778
Name
(RefSeq) ubiquilin-4-like isoform X1
KO
K04523
ubiquilin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117770623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117770623
03051 Proteasome [BR:
hhip03051
]
117770623
Membrane trafficking [BR:
hhip04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
117770623
Proteasome [BR:
hhip03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117770623
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
STI1-HOP_DP
UBA
Rad60-SLD
Ubiquitin_5
UBA_7
YukD
UBA_HOIP
CUE
UBA_NBR1_C
Dsc3_N
Rad60-SLD_2
Symplekin_C
Motif
Other DBs
NCBI-GeneID:
117770623
NCBI-ProteinID:
XP_034456152
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All DBs
Position
11:complement(10230799..10237600)
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AA seq
646 aa
AA seq
DB search
MTRKLTPDVSCSIGGVKMADQGAADPGNNNNNKAEDSEGTIIKVTVKTPKDKEEIAIAED
ASVTQFKEEISRRFKAKQDQLVLIFAGKILKDGDSLSQHGIKDGLTVHLVIKTAQKAGEG
ASAAASSSTSTPAASSSTSSPGTNPSSTAGSTGSAPPSTQTPNLLTGFGDLSSLAGLGMG
SSNFMELQQQMQRQLMSNPEMLSQIMENPLVQNMMSNPDLMRQMIMANPQMQTLMERNPE
ISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNLESIPGGYNALRRMYTDIQEPMF
SAAREQFGSNPFSALGGGSDSGVQPSRTENREPLPNPWSPPNSSNPPESGGGTTGSTSTT
GGTTPSVSNPLGINPGSLGNGMFNSPGMQSLLQQISENPQLMQNMLSAPYMRSMMQSLSQ
NPELASQVLMNNPLFAGNPQLQEQFRSQLPVFLQQMQNPEALSVMTNPRAMQALMQIQQG
LQTLQTEAPGLMPSLMPGGMPGMPGGMPGMPGGMPGMPGGMPGGMPGMPGGMPGGMPGGI
PGIPTGGAMPTENPASSPSSAATNPAQQQLMQQMLQMFAGGGGGGGVGGGGGGTATTQTP
EMRFQSQLDQLNAMGFINREANLQALIATGGDINAAIERLLGSQPS
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgacccggaagctgacgccagacgtgagctgttccattggtggagtaaagatggctgac
caaggcgccgcagatcctggtaataacaacaataataaagccgaagactcggagggaact
attatcaaggtcacagtgaaaaccccgaaggacaaagaagagatcgccatcgcagaggat
gcctccgtcactcagttcaaagaagagatctcaaggcggtttaaagccaaacaggaccag
ttggttctgatctttgcagggaagatcttgaaggatggcgacagcctcagccaacacggc
atcaaggatggcctgacagttcacctagtcattaagacagcacagaaggcaggagaaggt
gcaagtgccgcggcctctagctcaacctctactccagctgccagttcatccacctctagt
ccaggcaccaacccctcctccacagcaggttctactggttctgccccaccatccacacag
acacccaacttactgactggctttggtgacctgtcgagtttggctggactgggcatgggc
tcatctaacttcatggagctgcagcagcagatgcagaggcagctcatgtccaacccagag
atgctctctcagatcatggagaacccgctggtgcaaaacatgatgtccaaccctgacctg
atgaggcagatgatcatggccaatcctcagatgcagacgctgatggaacgcaatcctgag
atctcccacatgctcaacaaccccgagctcatgagacagaccatggagctggccaggaac
ccagccatgatgcaggaaatgatgcggaaccaggaccgggctctgagcaacctggagagc
atcccaggaggttacaatgctttgaggaggatgtacacagacatccaggaacccatgttc
agcgctgccagggaacagtttggtagcaacccgttctcagctctaggtggcggctctgac
tctggtgtccagccatcacggacagagaaccgggagcctctgcccaatccatggagccca
ccaaattcttctaacccccctgagagtggaggggggaccacaggaagcactagcactacc
gggggcaccacccccagtgtgtccaatcctctgggcatcaatccaggaagtctgggcaat
ggcatgttcaacagccctggcatgcagagtctactgcagcagatctcagaaaaccctcag
ctgatgcagaacatgctgtctgctccctacatgcgcagtatgatgcagtcactgtctcaa
aacccagagttggcttcccaggttttgatgaataatcccttgtttgctggaaacccacag
ctccaggaacagtttagatctcagctacccgtctttttgcagcagatgcagaacccagaa
gccctgtcggttatgaccaaccccagagccatgcaagctctaatgcagatccaacagggc
ctacagacactgcagacagaagcaccaggcctcatgcctagtttgatgccaggtgggatg
cctgggatgccaggtgggatgcctgggatgccaggtgggatgcctgggatgccaggtggg
atgccaggtgggatgcctgggatgccaggtgggatgccaggtgggatgccagggggaatt
ccaggcatacccacgggaggggccatgcccacagagaacccggcctcctcacccagcagt
gcagcaacaaaccccgcccagcagcaactgatgcaacagatgctccagatgtttgctgga
ggaggaggaggaggaggagtaggaggaggaggaggaggaactgcaacgacccagacccca
gagatgcggttccagtcccagctggaccagctgaacgccatgggcttcataaaccgcgaa
gccaacctgcaggccctcatcgctactggaggagacatcaatgccgctatcgagagactg
ctgggctcacagccctcgtaa
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