Hippoglossus hippoglossus (Atlantic halibut): 117770643
Help
Entry
117770643 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: dynein intermediate chain 2, axonemal-like
KO
K11143
dynein axonemal intermediate chain 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117770643
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117770643
04812 Cytoskeleton proteins [BR:
hhip04812
]
117770643
Cilium and associated proteins [BR:
hhip03037
]
Motile cilia and associated proteins
Dynein arm
117770643
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
117770643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_EIPR1
Beta-prop_EML
MIOS_WD40
WD40_RFWD3
PHF5
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
117770643
NCBI-ProteinID:
XP_034456183
LinkDB
All DBs
Position
11:293715..299131
Genome browser
AA seq
587 aa
AA seq
DB search
MDIVHVYTKLRGELGRQCLFSDRPAELLVDVLPEPSLGLEFIPKTPREQAQGVDHDMSEH
QVNTECFQSNSCGINHVEGGWPKDVNPEEMEQTIRFRKKVEKDESYINSVLQLASVMEHC
IRQNNAVDIYQEYLEDEEEVEGSQEPPSAKTIYVFRDPNEVKRTITGLSWHPDSGRKLAA
AYSCLEFQKTSKDMSLDSYIWDIENPNRPEMTLKPTSPLICLNYNPKDSHILVGGSFNGQ
IAYWDTRRGSQPVEISSVEQSHRDPVYKIVWLQSKTGTDAFSASTDGQVLWWDVRKLSEP
TEHLVLDLGREGNLNRALGAISLEFESTMPTKFMVGTEQGVVVSCNRKAKTPAEKIVCTY
DGHHGPIYALQRNPFFPKNFLTVGDWTARIWSEDIKESSIMWTKYQMSFLTDACWSPVRP
SVFFTVKNDGVLDVWDIIFKQNDPTLSLKVCDTALNSLCVQDNGRLVACGSQQGEATLLE
ICSGLSTLQKNEKNLLAAMFERETKREKILESRQREIRLKERSRSEQSKEEEGGQEEGEE
SPEQLIVRAENDFSSMVEMEQKRRKERQDGSNQEKDVCKEKXVIVTL
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacatcgtccacgtctacacgaagctccgcggggagctcggccgccagtgtctgttc
tcggaccggcctgctgagctgctggtggacgtgctcccagagccgagtctgggtctagag
ttcatcccgaaaacccccagagaacaggcgcagggggtggaccacgacatgtccgagcac
caggtgaacacggagtgcttccagtccaacagctgtgggatcaaccatgtggaggggggg
tggcccaaagacgtcaaccctgaggagatggaacaaaccatccgtttcaggaagaaggtg
gaaaaagacgagagctacatcaacagcgtcctgcagctggccagtgtaatggagcactgc
atcagacagaacaatgctgtggacatctaccaggagtacctggaggatgaggaggaagtg
gagggaagtcaggagccgccttccgccaagaccatctatgtctttagagatcctaatgag
gtgaaacgtaccatcactggtctgtcatggcatcccgacagcggcaggaagctggcggcc
gcctactcctgcctcgagttccagaaaacgtccaaagacatgagcctggactcctacatc
tgggacattgagaacccgaacagaccagagatgacactcaagccgacatctccacttatc
tgtctgaattataatcctaaagattcacacattctggtaggaggcagcttcaatggacag
atcgcgtactgggacacccggagaggcagccagcctgtggagatttcctctgtggagcag
agtcacagggacccggtttataaaatcgtctggctgcagtccaagacaggaactgacgca
ttctctgcctccacggatggacaggttctatggtgggatgttcgcaagttgagcgagccc
acagagcatctggttctggacctgggcagggaggggaacctaaatcgggctttaggagcc
atctcactggagtttgaatccaccatgccgactaagttcatggtggggacggagcagggt
gtcgtcgtctcctgtaacaggaaggcaaagacaccggccgagaaaatagtttgtacgtac
gatggtcaccacggacccatctacgccctgcagaggaatcccttctttcccaaaaacttc
ctcaccgtgggggactggacggcccgaatctggtctgaggacatcaaggaatcatccatc
atgtggaccaaatatcagatgtcgttcctgacagacgcctgctggagtccagtcagaccc
tctgtcttcttcacagtgaagaacgacggtgtcttggacgtctgggacatcatattcaaa
cagaacgaccccacactcagtctcaaggtgtgtgacacggctctgaacagcctttgcgtt
caggacaacgggcgtttggtggcgtgtggttctcagcagggcgaggccacgctgctggaa
atctgctctggactgtcgacgctccagaagaacgagaagaatctgctggctgctatgttt
gagcgcgagacaaagcgagagaagatcctggagtctcgacagagagagattcgtctgaaa
gagaggagtcgatcggagcagagcaaagaggaggaaggaggtcaggaggagggagaggag
agtcctgaacagctgatcgtcagagccgagaacgacttctccagcatggtggagatggag
cagaagaggaggaaggagaggcaggacggatcaaaccaggagaaagacgtctgtaaagaa
aaataagtgatcgtgactctgtag
DBGET
integrated database retrieval system
