Hippoglossus hippoglossus (Atlantic halibut): 117770786
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Entry
117770786 CDS
T07778
Name
(RefSeq) semaphorin-6D-like isoform X1
KO
K06842
semaphorin 6
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
117770786
NCBI-ProteinID:
XP_034456392
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Position
11:complement(37759..72207)
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AA seq
1158 aa
AA seq
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MSPFDWSSPWRPLPLMPLLILTSCFLSEAALSTNFPKDLEPINVVISDQSYHYPSFQGLL
RDNETLRLGLDFQRMLRLNHMLYIAARDHVFAVNLTMAADQLIPQLKLTWKSKDVSKCTV
RGKNSDECYNYVKVLVPRNDETLFTCGTNAFHPTCRNYKMTSLDQVGEDVVGQARCPFES
HQSNVGLFAGGDFYSATMTDFLASDAVIYRSLGDDRPVLRTVKYDSKWLREPHFLHAIDY
GNYVYFFLSEMAVEYTALGKVVFSRVARVCKNDNGGSPRVLERYWTSFLKARLNCSVPGD
SFFYFDVLQSLTNVLQINQRPAVVGVFTTQANSIPGSAVCAFYMDDIEKVFNGKFKEQRT
SDSSWTPIPDEQVPRPRPGVCAGDGSAAEYKSSVQFPDETLTFIKSYPLMDEAVPSLNDR
PCFTRTSSRSKLTQIVVDVLAGPFKDRIVMFLGSDDGRVLKVLASMHPNDSFGSKLLEDI
DVYNPSKCNVQDQEDRRVLGLELDKDHHALFVAFSSCVIRTPLSRCPQHGPCKKACLASR
DPYCIWLRTGSCANMAPGFKSGFEQDIEGDHSLLDDGCQGDVFVMTRNQESGVDSAFGVH
RLPDMDQRAAANVHYTLLIACVLVAFFLGAILSGFMMSCYCGRSAAHRARRLGKDPEMSL
PHALSLRSLAKLNGLLEGAPKEDKLDVSTPKMYSSFIPNGRSEPHLHSPGHQGLSLGDPE
LNVSQVITSLQSLSQTDGELSGLPTPDSTPQLPIKNMKALQQHQYEKNQYFNNTMAKNPK
SGSSLGFMAVVGNSFTPQVFPYSHHHGNSLSNGAAHGTGTSSTSLHLPEERDTLNEERAV
TARGGGGGGGGEGGSEGRVYHHHHSQLSLAQTVVDVSALDELLKHIHEVSASGTGGIKVL
TSISSSSLFPGPSSSGGQHHPLDQGHQTHTHHYNHSHHHSNHHCINSNCGGCRHHQQKIP
ETECALYNSTAALPRDALPKRLDAPSQNSASSFATSSSSSSSSSNNPTSSTSIPSASSSS
SSTPLQPKGIPERFGGSSVSVARHHSQRHSLIKMGSGGVAVPRHHSFNQRGAQHANFLAR
MNTNSSSNGPPARNHCESQRPSVASTCLTRQHSYTEGPHVQRAAIVRRTASLKPQVPPKP
LFLPNTAASATEVGKYNY
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgtccccatttgattggtcgtcaccatggcgaccactgcccctgatgccgctgctcatc
ctcacttcctgtttcctgtccgaggcagctttgtccacgaatttccccaaagacctggag
ccaattaacgtggtcatctcggatcagtcgtatcattatccaagttttcagggtttactt
cgggacaacgagacactgcgtctgggcctcgactttcagaggatgttacgcctcaaccac
atgttgtacatcgctgccagggatcacgtgtttgcggtgaatctgacgatggcagcggac
cagttgattcctcagctgaagctgacgtggaaatctaaagacgtgagcaagtgtacggtg
cgagggaagaacagcgacgaatgttacaactacgttaaagttctggtgccaagaaacgac
gaaacacttttcacctgcggtaccaacgctttccaccccacctgtcgaaattacaagatg
acgtcgttggaccaggtgggggaggatgtggtgggacaggcccgctgtcccttcgagtct
catcagtccaacgtgggactgttcgcagggggcgacttctactcggccaccatgacggac
ttcctggcgagcgatgccgtcatctacaggagcctgggagacgaccgacccgtcctcagg
accgtcaagtacgactccaagtggctccgagagcctcacttcctgcacgccattgactac
ggaaactatgtctacttcttcctgagtgagatggcggtggagtacacagctctgggaaag
gtggtgttttctcgcgttgctcgtgtttgtaagaatgataatggaggatctccccgagtt
ctggagagatactggacgtctttcctcaaggctcgtctgaactgttcggttcctggagat
tcgttcttctacttcgacgttcttcagtcactcaccaacgttctgcagatcaaccagaga
cctgctgtggttggagtcttcaccactcaggccaacagtatccctggatctgcagtttgt
gcgttttacatggacgacatcgagaaagtcttcaatggaaaattcaaggagcagaggacc
agcgactcatcctggacaccgattcctgatgagcaggttcccagaccgagacctggtgtg
tgtgcaggcgacggttcggctgcagaatacaagtcgtctgttcagtttccagatgagaca
ctaactttcatcaagtcgtatcctctgatggacgaagctgttccctccctcaacgaccgg
ccttgcttcacccgcacgtccagcaggtccaagttgactcagatcgttgtggatgttttg
gccggtccctttaaagaccgcattgtcatgttcctcggctcagacgacggacgagtccta
aaggttttggcgagcatgcatcccaacgacagcttcggctccaagctgctggaagacatc
gacgtttacaacccgtccaagtgtaacgttcaggatcaggaggacaggagggttctggga
ctggagctggataaagaccatcatgctttgttcgtcgccttcagcagctgtgtgatcaga
acaccgctaagtcgctgtcctcaacacgggccgtgtaaaaaagcctgtctggcctctcgt
gacccatactgcatctggctgcggaccgggagttgtgccaacatggcgccgggtttcaag
tcggggtttgagcaggatatcgagggcgaccactcgctcctcgatgacggctgccagggt
gacgttttcgttatgacacgaaaccaagagtccggagttgactccgccttcggtgttcat
cgtcttccagatatggaccaacgcgccgcagctaacgtccactatacactcctgattgct
tgcgtgttggtggctttcttcttgggcgccatcttgtcaggctttatgatgtcatgctac
tgcggacgcagtgccgctcaccgggcacggcggctaggaaaagaccctgagatgtcactg
cctcacgctctgtcgctacgatctctcgccaagctcaacggtctgctggagggagcgccg
aaggaagacaaactggacgtgtcaactccaaagatgtacagctcctttatcccgaacgga
cgctccgaacctcatttgcacagccccggacaccagggcctgtcgctgggagaccctgag
ctcaacgtgtcgcaggtgataacttctcttcagtctttgtcgcagacggatggtgagctg
tccggtctgcccacgccagactccaccccccagctgcccatcaagaacatgaaggcgctg
cagcagcatcagtacgagaagaaccaatacttcaacaacacaatggccaaaaaccccaag
tctggatccagtctgggttttatggccgtcgtcggaaactctttcacaccgcaggtgttt
ccctactcacatcaccatggcaacagtctgagcaatggagcagcccacggaaccggcact
tcttcaacatcgctgcacctccctgaggagagagacaccttgaatgaggagcgagcagtg
acagcaagaggaggaggaggaggtgggggaggagagggaggatcagaaggcagagtctac
catcatcaccattcgcagctgtctcttgcacagacggtggtggacgtgtcggcgcttgac
gagctgctcaaacacatccacgaggtcagtgcgtcaggcaccggtggcatcaaggtcctc
acctccatctcctcgtcctcgctgtttcctgggccgtcgtcctctggggggcaacatcat
ccccttgatcagggtcaccagacgcacacccaccactacaaccacagccatcaccatagc
aaccaccactgcatcaacagcaactgtggaggttgtcgtcaccaccagcagaagatccca
gagactgaatgtgcgttgtacaacagcaccgccgcgctgccgagggacgcccttcccaaa
cgtttggacgcaccctcccaaaattctgcctcctccttcgccacctcctcttcttcctcc
tcttcatcctctaacaatcctacttcctccacatccattccttctgcctcctcttcctcc
tcctccacaccgctccagccaaaggggatcccagagagatttggaggaagcagtgtctct
gtggcacgccaccactcccaacgccactcgctaatcaaaatgggcagtgggggagttgct
gttccccgtcaccacagcttcaaccagcggggggcacagcatgctaactttctagccagg
atgaacaccaacagcagcagcaatggccccccggccagaaaccactgtgagagccagcgg
ccgtcggtcgccagcacctgcctgacgcggcagcacagttacaccgaggggccacacgtg
cagcgggcagcgatcgtccggagaacggcttcgctcaaacctcaagtcccgcctaaaccc
ttgttcctgccaaacacagcggcatcagcaacagaggtgggaaaatacaactactga
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