Hippoglossus hippoglossus (Atlantic halibut): 117770873
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Entry
117770873 CDS
T07778
Symbol
snx13
Name
(RefSeq) sorting nexin-13 isoform X1
KO
K17925
sorting nexin-13
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
117770873 (snx13)
Domain-containing proteins not elsewhere classified [BR:
hhip04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
117770873 (snx13)
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Gene cluster
GFIT
Motif
Pfam:
PXA
Nexin_C
PX
RGS
Rep3_C
NCH1
Motif
Other DBs
NCBI-GeneID:
117770873
NCBI-ProteinID:
XP_034456552
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All DBs
Position
11:11723161..11753318
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AA seq
981 aa
AA seq
DB search
MSNDPRERISTSQQTQASLSIWGWGGLGVVLFLVTFGPFAIFYLAFYIFCFVGGGFAVTL
LYGKINSEKHLEKCEHSYLPPTQIGIVKTLDEMKLEMKPIRIDRRLTGSSFIDEPLQQVI
QFALRDYIQYWYYTLSEDESFILEIRQTLQNALVQFSTRSKEVDWQPYFTTRLVDDFATH
LRVFRKAQDRLADREDKQRDITEELVDSFFEAEVEMERKICRDVVCTSNKDEEGFLRDLC
ELLLYLLLPPGDFHNKNMRYFLREVLARGVLLPLINQLSDPDYINQFVIWMIRDSSCNYE
AFMNILKLTDKPPELEAVKDKVVEELQYLRSLDTAGDDINVIKNQINSLLFVKKVCETRI
QRLQSGKEVDALKLAANFGKLCVIPLDHILVHNIALQFFMDFMQAAGAQAELFFWLTVEG
YRVTAQQQLEAMQGWQKDGKKQPSATKGLLKAAALGVFEQYLSEKASPRVQVEEESVTKL
GEKLQKEDPTPEIFDEIQRQVYDMMLRDERYYPSFKQSPLYVRMLAELDMLKEPSYRGSD
DGDGESFNGSPTGSINLSLDDLSNSCHDESMHLHAFISDTADACLPGFWGAAGVCNDHGK
TYALYAITVFRRNQDGSEDCWKTYRRYSDFHDFHMRITEQFENMASILKLPGKKTFNNMD
RDFLEKRKKDLNAYLQLLMNPEMVKACPTLIPYVYDFLENKAYSKGKGEFARKAHQIDTF
VNPLKSSMRNVSNAVKALPDSLAEGMTKVSDNMGRMSERLGQDLKQSILKGPPLLPKSDI
DPEHCRVSAQLDDNVDDNIPLRVMLLLMDEVFDLKEKNQWLRRNIKNLLQQLIRATYGDT
INRKIVDHVDYLTSPEQVADYVKKFRDSYWPNGILAETTPRRDKSIRMRTRVAAKTSLLG
IMPDELKHIIGADTTRKGILRVFDMFQYQPMNRRLVYVFLEGFLETMFPQYKFPELFVKL
HSRSPRIHRYSQKLKSASLKR
NT seq
2946 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacgaccctcgagaacgaatttctacatcacaacaaacacaggccagtctatcc
atctggggatgggggggtcttggagtcgtgctgttcctcgtcacctttggaccctttgcc
atattctacctggccttttatatcttctgctttgttggagggggctttgcggtcactctg
ctctatggaaagatcaactcagagaaacacctggagaaatgcgagcactcttacttgcca
cccacacagattggtatagtgaagacattggatgagatgaagctagaaatgaagcccata
aggattgaccggagattgactggctccagttttatagatgaaccactacaacaggtgatc
cagttcgctctgagagactacatccagtactggtactacactctgagcgaagatgaatcc
tttatattggagatcagacaaacactgcagaacgcactcgtccagttctccacacggtcc
aaagaggtggactggcagccttactttaccactcgcctggtggacgactttgccacccat
ttacgtgtcttcagaaaagcccaggatcgcctcgctgacagagaggacaagcagagagac
ataacggaggagctggtggactcgttctttgaagccgaggtggagatggagaggaagatt
tgccgagacgtagtgtgcacttcaaacaaagacgaagaaggtttccttcgggacttgtgt
gagttgcttctgtatctgttactacctcctggagatttccacaacaagaacatgagatac
ttcctaagggaggtgttggctcgtggtgtgctgcttcctctgatcaaccagctgagcgac
ccggactacatcaaccagtttgtcatctggatgattcgggactccagttgtaactatgaa
gccttcatgaacatactgaagttgacagacaaacctcctgagctggaggctgtcaaggac
aaggtggtggaagagctgcagtatctccgctccctggacactgctggagatgacatcaat
gtgatcaaaaaccagataaacagtcttctgtttgtgaagaaggtttgtgagaccaggatc
cagaggctgcagtctggcaaggaggtggacgccttgaagctggcagccaacttcggcaag
ctgtgtgttatccccctggatcacatcctcgtccacaacatagccctgcagttcttcatg
gacttcatgcaggcagcgggggcgcaggccgagctgtttttctggctcactgtggagggc
tacagggtgacggcacagcagcagctggaggccatgcagggctggcagaaagacggcaag
aagcagcccagcgccaccaaaggactgctgaaggccgctgcactcggtgtcttcgaacaa
tacctctctgaaaaggcatctcccagggtgcaggtggaagaggagtctgtaactaaactt
ggggagaagctgcagaaggaagatcccacgccggagatatttgacgaaatccagagacag
gtgtatgacatgatgctacgtgatgagcgctactacccctccttcaagcagagccctctg
tacgtccgcatgctcgcagagctggatatgttgaaagaaccaagttaccggggatctgac
gacggcgatggagagtctttcaatggctctcccacaggaagcataaacctatctttggac
gacttgtccaactcctgccatgatgaatctatgcaccttcatgccttcatctccgacaca
gctgacgcttgtctccccggcttctggggtgctgcaggggtttgcaacgaccacggtaag
acctacgcgctgtacgccatcactgtgttcagacgcaaccaggatggcagcgaggactgc
tggaagacctaccgccgctattcagacttccatgacttccatatgaggatcactgaacag
tttgagaacatggcgtcgatactcaagctgccaggaaaaaagacattcaacaacatggac
agagacttcttagagaagagaaaaaaagacctcaatgcttacctacagttgctgatgaac
ccagagatggtgaaggcctgcccaactctgattccttatgtctacgacttcctagaaaac
aaggcctacagcaagggcaaaggagagttcgcacgaaaggcccatcagatagacacattt
gtaaatcctctgaagagctcaatgaggaacgtgtccaatgcggtgaaggccctgccggac
agtctggctgaaggaatgaccaaggtatctgacaacatgggacgcatgtcagaaagactg
ggtcaggaccttaaacagtccatactgaaggggcccccactcctccccaagtcagacatc
gaccctgaacactgtcgagtctccgcgcagctcgatgacaacgtggacgataacatcccg
ctgagggtaatgctgctgctgatggatgaagtgtttgacctgaaggagaaaaatcagtgg
ctgcgcaggaacatcaagaacctgctgcagcagctcatcagagcgacatatggagacacc
atcaacaggaaaatcgtggatcatgtggactacttgacttcaccagagcaggtggctgac
tatgtcaagaagttcagggattcctactggcccaacggtatactggctgagacaacgccc
cgccgggacaagagcatccgcatgaggacacgagtagctgccaagaccagcctgctgggt
atcatgccagatgaactgaagcacatcattggagcggacaccacgagaaagggcatcctg
cgcgtcttcgacatgttccagtaccaacccatgaaccggcggctcgtctacgttttcctg
gagggcttcttggagacaatgttcccccagtacaaattccccgagctctttgttaagctg
cactcccgctcaccgcgcatccacagatacagccagaaactcaaatcggcctctctcaag
aggtga
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