Hippoglossus hippoglossus (Atlantic halibut): 117770898
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Entry
117770898 CDS
T07778
Symbol
sgce
Name
(RefSeq) epsilon-sarcoglycan isoform X1
KO
K27061
epsilon-sarcoglycan
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117770898 (sgce)
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Gene cluster
GFIT
Motif
Pfam:
Sarcoglycan_2
Sarcoglycan_2_C
Motif
Other DBs
NCBI-GeneID:
117770898
NCBI-ProteinID:
XP_034456627
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Position
11:complement(12158683..12170427)
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AA seq
477 aa
AA seq
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MSTMSAAAVAVWLSAVYFACANDTEHDTLLERNASMERSMGLKQRTALYRDVVTILSRAH
ADRNVYPSAGVLFVHVLEREYFKGEFPPYPKSGDAINDPITFNTNLMGYPDRPGWLRYIQ
RTPHSDGVLYGSPTANNVGRPTVIEITAYNRRTFETARHNLVINIMGTEEFPLPYQAEFY
IKNMNVEEMLASEVLGDFLGAVKNIWQPERLNAINITSALDRGGRVPLPINNLKEGVYVM
VGADVPFSSCLREVESPHNQLRCSQEMEPVISCDKKFRAQFQIDWCKISLVDIHKVVPVY
ITRPDPGTGILPEFGEYNPPSESLKNRDYFYDFLITLAVPFAVAVVLFFILGYTMCCRRE
GVEKRNMQTPDIQLVHHSSIQKSTKELRSMSKNREISWPLSTLPVFNPVSGEVVPPLHPD
NYETTSMPLMQTQTNLQNQITIPQQRPSGDSYVMSTFRRLEVNGIPEERKVAEALNL
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgtcggctgcagctgtcgcggtgtggctgtccgcggtttactttgcatgt
gccaatgacacggaacacgacacgttacttgagagaaatgccagcatggagcgatccatg
ggcttgaagcagagaacagccttgtacagagacgtggtcaccatcttgtcgagggctcac
gcagaccgtaacgtctacccatccgcaggagtcctgttcgtccatgttctggaaagagag
tactttaaaggagagttccctccctatcccaaatcaggcgatgccatcaatgacccgatc
actttcaacaccaacttgatgggttacccagacaggcctggctggctgcgttacattcag
aggacgccgcacagcgacggagtgctctacggatcgcccactgcaaacaatgttggcagg
cccactgtcatagagattaccgcctataaccgacgcactttcgagacagcacggcacaac
ttggtcataaacatcatgggtacagaagagttccctctgccctaccaggccgagttttac
atcaaaaacatgaatgtggaggaaatgctggccagtgaggtgctgggggacttcctcgga
gctgtgaagaacatatggcagcccgagcgcctcaatgccatcaacatcacctcggcactg
gaccgtggcggccgcgtgcctctgcccatcaataacctcaaagaaggagtgtacgtgatg
gttggagctgatgttcccttctcgtcgtgcctgcgggaggtggagagcccacacaaccag
ctgcgctgcagtcaggagatggagccggtcatcagctgcgacaagaagttcagagctcag
tttcaaatcgactggtgtaagatttctctggttgacatccacaaagtagtcccggtatac
ataacccgtcctgatccaggcacagggatcctgcctgaatttggggagtacaaccccccc
tctgagtctttgaagaaccgggactacttctacgacttcctcatcacgctggccgttccc
tttgccgtggctgtagtcctcttcttcatcctcggctacactatgtgctgccggcgtgaa
ggggtggaaaaaagaaacatgcaaacaccagacatccagctggttcaccacagctccatc
cagaagtccaccaaggagctgcggagcatgtctaagaaccgcgagatctcctggccgctc
tccactctgcccgtcttcaacccggtcagcggcgaggtggtgccgcccctccaccccgac
aactacgagaccaccagcatgcccctcatgcagacacagacgaacctgcagaatcagatt
acgataccacagcagcggccatcaggagatagttatgtcatgtcaacgtttcgaaggtta
gaggtaaatggtattcctgaggagagaaaggtggccgaagcccttaatttgtga
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