Hippoglossus hippoglossus (Atlantic halibut): 117770959
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Entry
117770959 CDS
T07778
Name
(RefSeq) tapasin-like isoform X1
KO
K08058
TAP binding protein (tapasin)
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
117770959
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Gene cluster
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Motif
Pfam:
Ig_3
ig
V-set
I-set
C1-set
Motif
Other DBs
NCBI-GeneID:
117770959
NCBI-ProteinID:
XP_034456803
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Position
11:2011263..3186802
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AA seq
441 aa
AA seq
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MTDFSTIYKLCLLTVTCCIQACSSSSSSRCPAVECWLVQDHVSRRGATTQEKSLLHIRTD
ANSRDAASEQIPSDINPDRVFFITDPAATLCHQSLSPPTRGSLQKAQCEISPFLHQPSTL
KWVAPLTVTGFSPVYLQADWFSAALLGLNKQLIISSIMRSPTATKEPNVILSVSSKTVSV
QARLGKPVLLDCGFWVDPSSPLSGLGFAVEWRYQFRGKGRLVLAYDGKTDRVADTQEEGA
TLDFEGLHQKGNASLILQETKVRHSGTYICTVHLPYLQAQVAVELEIVEPPSLSIHPSPL
PLAVPGQTLVVQCEASGFAPLSLELSWEFKGADGKSRPLESASVTGHRQAWDGTYGQSTR
LELDTSNLGTGGELTCVAVHPGGTRRASTSLSVIGFGSPSIEDSMAMVGVALVLYGLIKV
VSWTFSSSGTDVADKVEKKEK
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacttttctaccatttataaactctgcctgctcactgtcacctgctgcatccaa
gcctgcagcagcagcagcagcagcaggtgtccggcggtggagtgctggttagtacaggac
catgtgagtcgtagaggagcgacgacccaggaaaagtctctgcttcatatcaggacagac
gcaaacagccgagatgcagcgtcagaacagattccctccgacatcaacccggacagagtc
ttctttattacagacccggctgccacgctctgccaccagtccctcagcccccccaccaga
ggctcgctgcagaaggcccagtgtgagatcagccccttcctgcatcagccctccacactc
aaatgggttgctccactcacagtcactggcttcagccccgtgtacctgcaagctgattgg
ttctcggctgcgctactggggctcaacaaacagctgatcatttccagcatcatgcggtct
cccacggcaaccaaagagccaaatgtgatcctgagtgtcagcagtaaaaccgtctcagtg
caggcccggctcgggaagccagtgctgctggactgtggtttctgggtcgatccttcctcg
cctctgtccgggttgggtttcgccgtcgagtggcgttaccagttcagaggcaaaggacga
ctggttctggcttacgacggcaagacagaccgtgtggctgacacccaggaggaaggggcc
acactggactttgagggtttgcaccagaaaggaaatgcatccctgatcctgcaggagacg
aaagtgcgtcactccgggacgtatatttgcaccgtgcatctgccgtaccttcaggctcag
gtggcggtggagcttgagattgtagaacctccatccctctccatccacccctcccctctg
cccctcgctgttcccggacagactttggttgtccagtgtgaagcgtccggcttcgccccg
ctctccctggagctgagctgggagtttaaaggcgcagatgggaagtccagacctctggaa
tcagccagcgtaacgggccacaggcaggcgtgggatggcacctacggccagagcacccgg
ctggagctcgacacctctaacctgggcacggggggggagctcacctgtgtggccgtccac
cctggaggcacacgacgggccagcacgtccctcagtgtcatcggattcggttctccgtct
attgaggactcgatggcgatggttggtgtggcgctcgtgctctacggtctcatcaaggtg
gtctcctggaccttttccagctcaggcactgatgtggcagataaagtggaaaagaaagag
aagtaa
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