Hippoglossus hippoglossus (Atlantic halibut): 117771110
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Entry
117771110 CDS
T07778
Symbol
gatad2b
Name
(RefSeq) transcriptional repressor p66-beta isoform X1
KO
K23194
transcriptional repressor p66
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117771110 (gatad2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117771110 (gatad2b)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117771110 (gatad2b)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
117771110 (gatad2b)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
NuRD complex
117771110 (gatad2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
P66_CC
GATA
FAM76
LIM
HscB_4_cys
Motif
Other DBs
NCBI-GeneID:
117771110
NCBI-ProteinID:
XP_034457057
LinkDB
All DBs
Position
11:21390059..21435795
Genome browser
AA seq
697 aa
AA seq
DB search
MERMSEEALRLNLLKRGLESPSEREEALAKRLKMEGHEAMERLKMLALLKRKDLADLAAL
EVAGPLGDGKGPGASSLHHQSLMGAAYEEKLNGSLRLGGHGGHGGHGGHGGHGGHGGHGG
HGGHGGHGGHGGHGGLGSHVGPSKNGKENILDEPVDMSAGRRCDVEHDRRTPSPDVIILS
DNEASSPRTTPRPEERLHQANLDMFKGKTGEERQQMIKALREELRLEEARLVLLKKLRQS
QMQKENVVQKVPVVQNAASSVQPPAIHSSPGMGKLPMRPGLHNPEPQNLRTAQGHTVIRS
AANANLPPMLMSQRVIAPNPSQLQGQRIPSKPGMSRSISGSMANAVSYQQASQQVAASQR
SGSSAMYMNLAHMQAAAAAGGVAGGLGGASAVSPSTMSGSASGGVSSMADQASSQAAAKL
ALRKQLEKTLLEIPPPKPPAPLLHFLPSAANSEFIYMVGLEEVVQSVLDSQGKLRGTLAR
MEPFFCAQCRTDFTPHWKQEKSGRILCEQCMTSNQKKALKAEHTNRLKNAFVKALQQEQE
IEQRLQQQAALSPSSVPTGPNASKTDTMIRHHALRQVHMFPAQAPQPQASMQRGLSNSAR
GVLSNFAQASQLSVASSLMGMTSAKHCGSGGSSSSSSNRLQHDSRRQIYNIPGLNIAYLN
PAAVGAHKSSSLADRQREYLLDMIPPRSISQSITGQK
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atggagcggatgtctgaggaggcgctgcggctcaacctgctgaagcgaggcctggagtcc
cccagcgagcgagaggaggcgctggctaagcgcctcaaaatggagggtcacgaggccatg
gagcgcctcaagatgctggcactgctaaaacgcaaggacctagctgacctagcagccctg
gaggtcgcagggcccctgggagatgggaagggccctggagccagctccctccaccaccag
agcctaatgggtgctgcttatgaagagaaactcaatgggagtctaaggctgggaggccat
ggaggccatggaggccatggtggccatggtggccatggaggccatggtggccatggtggc
catggtggccatggaggccatggtggccatggaggtcatggtggccttggcagccatgtt
ggacccagtaagaatgggaaggagaacatccttgatgagccagtggatatgagtgctggg
agaagatgtgatgtggagcatgacagacgaactccatctccagatgttattatcctatca
gacaatgaagcgtccagtcccagaacaacacctcgtcctgaggagcgcctacaccaggcc
aacctggacatgtttaaggggaagaccggagaggagaggcagcagatgatcaaagctctg
agagaggagctgcgtctggaggaggctcggctggtgctgctgaagaagctcagacagagt
cagatgcagaaggagaacgtggtgcagaaggtcccggtggtccagaacgctgcgtcctct
gttcagcctcctgccatccacagctctcctggcatggggaagctgcccatgaggccgggc
ctgcacaaccctgagccccagaacctccgtactgcacagggtcatactgtcatcaggtca
gcagccaatgccaacctgccaccaatgctaatgtcccagcgagtgatagcccccaacccg
tcccaactgcaaggccagaggatcccctccaagcctgggatgtcacgttccatctctggc
agcatggccaatgctgtcagctaccagcaggcaagccagcaagtggcagcttctcagcgc
tcaggctccagtgccatgtacatgaacctggcccacatgcaagcagcagcagcggccggc
ggggtggcgggtggcctgggcggagcttcggctgttagcccatcaaccatgtccggttca
gccagcggaggggtgagctccatggccgaccaggccagcagccaggcagcagccaaactg
gccctcaggaagcagctggagaaaaccctgttggagatcccaccacccaaaccccctgcc
ccgcttctccacttcctaccctctgccgccaacagcgagttcatctacatggtgggcctg
gaggaggtggtgcagagtgtgcttgacagtcagggtaaactcagagggacactggcccgc
atggagcccttcttctgtgctcagtgcagaactgacttcacccctcactggaagcaagag
aagagtgggcgaatcctctgtgagcagtgcatgacgtccaatcagaagaaagctctgaag
gcggagcacaccaacaggctgaagaacgcgttcgtgaaggccctgcagcaggagcaggag
attgaacagaggctgcaacagcaggcagccctctctcccagctcagttcctacaggcccc
aacgcctctaagactgacaccatgatccgacatcatgcccttcgccaggtacacatgttt
cctgcccaagctccccagcctcaggcctcaatgcagagaggtctgtccaactcggcgcga
ggtgttctatcaaacttcgctcaggcctcccagctgtcagtggccagcagcctcatggga
atgactagtgccaagcactgtggaagcggtggaagcagcagcagtagcagcaatagactg
cagcatgacagccgtcgccagatctacaacatcccagggttaaatattgcctatctgaac
ccagcggcagttggagcgcataagagctccagcttagcagaccggcagagagagtacctg
ttggacatgatcccacctcgatccatatcgcagtccatcaccggacagaaatga
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