KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117771146
Entry
117771146         CDS       T07778                                 
Symbol
rpa3
Name
(RefSeq) replication protein A 14 kDa subunit
  KO
K10740  replication factor A3
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03030  DNA replication
hhip03420  Nucleotide excision repair
hhip03430  Mismatch repair
hhip03440  Homologous recombination
hhip03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    117771146 (rpa3)
   03420 Nucleotide excision repair
    117771146 (rpa3)
   03430 Mismatch repair
    117771146 (rpa3)
   03440 Homologous recombination
    117771146 (rpa3)
   03460 Fanconi anemia pathway
    117771146 (rpa3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hhip03032]
    117771146 (rpa3)
   03400 DNA repair and recombination proteins [BR:hhip03400]
    117771146 (rpa3)
DNA replication proteins [BR:hhip03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    117771146 (rpa3)
DNA repair and recombination proteins [BR:hhip03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     117771146 (rpa3)
   MMR (mismatch excision repair)
     117771146 (rpa3)
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     117771146 (rpa3)
SSDB
Motif
Pfam: Rep_fac-A_3 DUF7572 NMD3
Other DBs
NCBI-GeneID: 117771146
NCBI-ProteinID: XP_034457144
LinkDB
Position
11:20784688..20787058
AA seq 122 aa
MAGIIDVPKPRVNCSMLSQYTNRPVCFVGCVEKVHPTGKTFTVSDGEGKVVTVELNDPLD
EELSGVVELIGMVSNKGGIMATTYNMLREDKGIAFDLELYNEALKVVHDFPQHYPFEVTS
SG
NT seq 369 nt   +upstreamnt  +downstreamnt
atggcaggaataatagatgtccccaaacccagagtcaactgctccatgctgtcgcagtac
accaacagacctgtgtgcttcgtaggatgcgttgaaaaggttcacccgacaggaaaaacg
ttcactgtgtcggatggagagggaaaggtggtcacagtcgaactgaacgacccgcttgac
gaagagctgagcggcgttgtggagttgattggtatggtgtccaacaaaggaggaataatg
gccacgacatacaacatgctgcgagaagacaagggcatcgccttcgatctggagctctac
aatgaagccctgaaggtcgtccatgatttccctcagcactacccttttgaagtgacttcc
agtggatga

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