Hippoglossus hippoglossus (Atlantic halibut): 117771223
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Entry
117771223 CDS
T07778
Symbol
ttc28
Name
(RefSeq) tetratricopeptide repeat protein 28 isoform X1
KO
K24936
tetratricopeptide repeat protein 28
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
hhip03037
]
117771223 (ttc28)
Cilium and associated proteins [BR:
hhip03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
117771223 (ttc28)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_8
TPR_2
TPR_10
TPR_MalT
TPR_17
TPR_16
Rapsyn_N
TPR_11
RPN7
TPR_NPHP3
TPR_14
TPR_6
TPR_9
TPR_19
Motif
Other DBs
NCBI-GeneID:
117771223
NCBI-ProteinID:
XP_034457213
LinkDB
All DBs
Position
12:complement(2635494..2772296)
Genome browser
AA seq
2592 aa
AA seq
DB search
MEKQRTRKEKFSLFGSRSTSRTNPPSSSSSSSSPVIPSAATLKRAERPTGCSPSGLSKAE
FLERVRRSNQACQQGEYELAVRLYSEALTADPQNCILYSNRSAAYLRLGQYSTALDDAVK
ARLINPKWPKAYFRQGVALQYLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRD
SLEPTYQQLQKMKLDKSPFVVVSVIGQELLTHGFHGASVVVLEAGLKIGTCSLKLRGSVF
SALSSAYWSLGNAEKSVAYMQQDLEVTKTLGDQSGECRAHGNLGSALFSRGSYREALANH
RNQLVLAMKLKDREAASDALSSLGHVYTAIGDYPNALASHKQCVLLARQTQCQLSEARQL
GNMGAVYTALGDFTNAVQCHEQHLDIAKTLENRREEARAYSNLGSAYHSQRDFDKAISYH
TRVLELAQEQADRAIEMRAYAGLGHAARCMQDLERALQHHQHQLEIAQELQDRAAQGRAS
SNLGIIHQMKGEYETALKLHKAHLSLAQELGDYAAQGRAYGNMGNAYHALGIYDQAVRFH
RQELQMSLEVNDRPSQASTHGNLAVAYQALGAHDRALQHYLHHLTIARELRDTQSEARAL
ANLGNFHSWRGEYAQALPYYQQYLALAPGLQDLEGEGKVCHNLGYAHYCLGQYRDAVRYY
EQDLALAKDLQDKLAQAKAYCNLGLAHKALGEYNKAEECQRYLLSLAQALDNTQAVFRAF
GNLGDVCVCRGDLPGAVRFYQQQLTLAQKVSDQKMEADAYSALGSVHRLLRQLDTALSFH
SQELTVRKDIGDQQGECRALGHLAAVHMALGDYATTFQCYETQLGLAQGLRDARLEAQVH
GNMGITKMNMGVFEESIGYFEQQLAMLEQLSGTESMLDRGRAYGNLADCYDALGDYEEAI
QYYEKYLTVAQSLNHVQDQEKAYRGLGNSYRSIGSLQQGLVCFEKRLVAAHELGGEGGGK
AQAYGELGTLHSQLGNYEQALSCLEHQLNIARTAGDKSLEAEASDTLGGVYQLMADNETA
LQWHQRALDIAEQTRCVGSQGRAYGNLGLTYEALGNYERAVVFQEQHLSVAAQTNDLMSK
TLAYGSLGRIHHALQNYAQAVMYLQEGLRLAEQLGRREDEAKIRHHLGLSLWASGNLEEA
QHQLYRASVLFEMIRHETQHSTDYKLSLFDLQTSSYQALQRVLVSLGRHDEALAIAERGR
TRAFADLLVERQKGSQQAACSDPYIPVTVEHILETVNSQRAMVLYYSLAGGFLYSWLISP
GTGIVKFNEVYLGDPEADGGGSPQDGGGGAGASPLSLDQHIYNAREALGVDSHYSRVGSS
SETESEAGDLLEQQFEELNTSATDPTGYLRMVSRNNLFNRSCRSMTSLYSATVSPGKDSL
SSPPCRLSNISKPPLRALYDLLIAPMEGGLMHSSGPVGRHRQLILVLEGELYLIPFALLK
GSSSNEYLYERFSLISVPSLASLGATIKPHQRRGGPSLCTDGGSVAAVVGAPRLPPSVMD
RWLWGPLPSAQDEALWLGEQLGCHPLTGANATKERVLAALSQAECVHFATHISWKLAAVV
LSPSQEHAGGEGTGSRPKEKSLCGALTSGQPVDQDAEVKGSFSKKHSSPEGLRGADEASE
DEDSVCDVESVCDSPSLQDFLLTAADILGLCLTVKLVVLRLYPESSSRVTADGVVGLTRA
FLAAGVQCVCVSLWPAPIAASKLLTHTFYTALLNGTKASAALTEAMKTLQSSKHFSHPSN
WAGYMLIGNDVKLNSPMSLVGQALAEILQYPDRARDALRVLLHLIEKSLQRIQSGQCNPM
YTSQQSVENKVGGVPGWQALLSAVGFRLDFSGSVAGLSSAVFFPQSDPGDRLQQCSTTLQ
ALLGLTPPALQALCKLVTASEAGEQLIHKAVKSMVGMLHQVLVQLQSGDKEQDFSLAPIQ
VSISVQLWRLPGCHEFLAALGESVRIKEAMLSFPSNVLVTFLHSPSLSGFDLCEVGQEEV
VLKTGKQASRRTMHFALQSLLALFDSTELPKRLSMDSSSSLESLSSSQSASQPHSLPLSF
GCYPPQPSFLPPVCPDNLSCDAISVYSLSSLASSLSFLSRPEPAGSDTISQRLHQQEPDR
SRAGAGLYASLRPSGGLSRGRLPNHGGAAGEGEDEEYEGYSIISSEPLGRGGRDCDTLPL
PAGHRHGRGGAGRGSNGGHRYPITISSKGSISTPTSPIKAPPLPPTVSSNPKLRQEISSP
QRTRKGKVSSSESDQSSTETDSTVKSQEERMGPAGQMDPQELAQKILEETQSHMQAVESL
QKANMRGKTLTGPEGREEAHARQPFHSTPTTPTLTPTGGARGFQPSETSAFSRPPSRASL
KACSSPLSLPRHRSPLSTSVSTPPATRPKPPSRSSSLQKISSGYNSPAHSSSSLSLSGKE
QGSPSSMASPDVHALAQLKLKYPPSPYSAHISPSRSPADSAPSPALSYSSTGSVSGSSSP
ANTPELNQSKHDNKVQAVHNLKTFWANASQKHEVPCPASFLRGGNKRMSTVQKDVLGLLN
LSPNRESLSKNVEGSEDQNSDNRPNGHQKLEAKPPPPPAATVPTNSKGGSRLPSGNGFKF
LSPGHFFPSSKC
NT seq
7779 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagcaaaggacgaggaaagagaagttctccctgtttggttctcgctccaccagc
aggaccaaccctccttcttcatcctcctcctcttcgtcccctgtgataccttcagcggca
acactgaaaagagcggaacgaccaacgggctgcagcccctccggcctgagcaaagccgaa
tttctggagcgcgtgcgtcgcagtaaccaggcgtgccaacagggggagtatgagctggct
gtgcgtctgtacagcgaggccctgaccgctgacccccagaactgtatcctctacagtaac
cgctcggcggcctatctccgactgggtcagtacagcactgctctggatgacgcagtcaaa
gctcgtctcatcaaccccaaatggcccaaggcctactttcgtcagggggttgccctgcag
tacctgggtcgtcatgccgacgccctggcagcattcgcctccggcctcgcccaagacccc
aagagtctccagctgctggtcggcatggtggaggctgccatgaaatctcccctcagagac
tcccttgagcccacctaccagcagctgcagaaaatgaagctggacaagagccctttcgtg
gttgtgtccgtcatcggtcaggagctgctgacccacggtttccacggggcctctgtcgtg
gtgctggaggcggggctgaagatcggcacgtgctccctgaagctgcgtggatctgtcttc
tcggccctgagctctgcctactggtctttaggcaacgcagagaagagtgtggcctacatg
cagcaggacctggaggtgaccaagactttaggtgaccagtcaggtgaatgccgcgcccat
gggaaccttggctctgctctcttctccagaggcagttacagagaagcactggccaaccac
aggaaccagctggttctggccatgaagctcaaggacagagaagctgcgtctgatgctctc
agcagtctgggccatgtgtacacagctatcggcgactaccccaacgcactggcaagccat
aaacagtgtgtgctgttggcgcgacagacccagtgtcagctctccgaggctcgccagctc
ggcaacatgggcgccgtgtacacagcactgggagacttcaccaacgccgttcagtgtcat
gaacaacacctggatatcgcaaagactttggagaatcggcgggaggaagcacgggcgtac
agcaacctgggcagtgcctaccactctcaacgagactttgacaaggccatatcataccac
acaagagtgctggagctggcacaggagcaggccgacagagccatcgagatgagggcatat
gctggtctggggcacgctgcccggtgcatgcaggacctggagcgggcacttcagcaccac
caacatcagctagaaattgctcaggagctgcaggacagagctgcacagggcagagcatct
tccaacctgggcatcatacaccagatgaagggggagtatgaaacagcattgaagctccac
aaagcccacctgtccctcgcccaggagctgggggattatgctgcccaggggagggcctac
ggaaacatgggcaacgcctaccacgcactcggcatctacgaccaagctgtccgcttccac
cgacaggagctacagatgtcactggaggtgaacgatcgtccatcgcaggcctcaacacat
ggcaacctagcggtggcgtaccaggcactgggcgctcacgaccgggctctccagcactac
cttcaccacctgaccatcgcgcgagagcttcgagatacacaaagcgaagcaagagcacta
gcaaacctgggcaacttccacagctggagaggtgagtatgctcaggccttgccttactac
cagcagtacctggctctggccccaggcttacaggatctggagggagaaggcaaagtctgc
cacaacctcggctatgctcactactgcctggggcagtacagagacgctgtcaggtattac
gagcaggacctggccttggctaaggacctccaagacaaattagcccaggctaaagcctac
tgtaacctgggcctggcccacaaagcactgggggagtacaacaaagcagaggagtgtcag
cgatacctgctctctctagcacaagccctggataacacacaggcggttttccgggcgttt
gggaaccttggcgatgtctgcgtgtgtcggggtgatcttccaggagctgtgaggttctac
cagcagcagttaaccctggctcagaaagtcagtgaccagaagatggaggctgacgcctac
tcagcacttggctcagttcacaggctgctccggcagcttgatacagcattgtccttccat
agccaggaactgaccgtccggaaggatataggtgatcagcagggggagtgccgcgccctc
ggccacctggcagcagtgcacatggccctgggagactacgctacaaccttccagtgttat
gagacccagctgggcttggctcaggggctcagggatgcccgtctggaggcccaggtccac
gggaacatgggcatcaccaaaatgaacatgggagtgtttgaggaatcgatcggctatttc
gagcagcagctggctatgctggagcagctgagtggaactgagagtatgttggacagaggt
agggcctatgggaatctggcagactgctatgatgccctgggagactatgaggaggctatt
cagtactacgagaagtacctgactgtggctcagagtctcaaccacgtccaggaccaggag
aaagcctacagaggacttggcaattcatacaggtctattggtagtctccagcagggactg
gtgtgttttgagaagcggctggtggcagcccatgagctgggcggggaaggagggggtaag
gctcaggcttatggggagctgggcaccttacacagccagctgggcaactacgagcaggcc
ctctcctgcctggagcaccagcttaacattgcacgcacagcaggggataaatccctggaa
gcagaggcaagcgatactcttggaggcgtttatcagctgatggcagacaacgagacagcg
ctacagtggcaccaaagggcgttggatatagcagagcagacgagatgcgtggggagccag
ggtcgagcctacggcaacttgggactgacctacgaggctctcgggaactatgagcgggcc
gtggtctttcaggagcagcacctgagtgtggcggcacagaccaatgacctgatgtctaaa
actctggcctacgggagcctggggaggatacaccatgcactgcaaaactatgcacaggct
gtgatgtacctgcaggaaggtctgcgtctggccgagcagttaggtcgcagagaagacgaa
gctaagatacgccaccacctgggtctgtccctgtgggccagcggaaacctggaagaggca
cagcaccagttatacagagcatcagtcttatttgagatgattcgtcatgagacacagcac
agcacggattacaagctctcgctgtttgacctgcaaaccagctcgtaccaggctctccag
cgagtcctcgtcagcctaggtcggcacgatgaggctctggccattgcagagcgagggcgt
acacgtgcctttgccgatctcctggtcgagcgccagaaaggaagtcagcaagcagcgtgc
agcgacccttacatcccagttactgtggagcacatcctggagacagttaacagtcagagg
gcaatggtcctgtactattctctggctggaggctttctgtacagctggctgatatctccg
ggaacaggtatcgtgaagtttaacgaggtgtatcttggagatcccgaggcggatggcggt
gggagcccacaggatggaggaggaggagcaggtgcaagtcctctgtctctagaccagcac
atctacaacgccagagaggctctgggagtggacagccattacagcagagttggctccagc
agtgagacagagagtgaagccggggatctgttagagcagcagtttgaggagctgaacacc
tcggccaccgaccccacaggctacctccgcatggtgtccagaaacaacctcttcaacaga
agctgtcgcagcatgaccagcctatacagtgccacagtgtctccagggaaagacagcttg
tcctctcctccttgtcgattgagtaacatcagcaaacctcctctccgagccctttatgac
ttactcatagcacctatggaaggcggcctgatgcacagtagtggacctgtgggcagacac
agacagctcatattagtgttggagggagaattgtacctgatcccattcgccttgctcaaa
ggcagctcctctaatgagtacctgtatgagaggttcagtctgatttctgtaccttcttta
gccagcctgggagccacaatcaagcctcatcaacgtagaggcggaccctcactttgcaca
gatggaggttcagtggctgcagtggtcggagctcctcgcctgccccccagcgtgatggac
cgctggttgtgggggcccctgccttcagcccaagatgaagctctttggttgggggaacag
cttggatgtcatccactgaccggggcgaatgccacaaaggagcgtgtgctcgcagcactg
agtcaggcagagtgcgttcactttgcgactcatatatcttggaagctcgcggccgtggtc
ctctcccccagccaagagcatgctgggggagagggcacaggaagccgacccaaggagaaa
tcactgtgtggggccttgacctcaggccagcctgtggatcaggatgcagaggtcaagggt
tcgttttcaaagaagcacagcagcccagagggactcaggggggcagatgaagcgagcgag
gatgaggacagtgtgtgtgatgtggagagtgtgtgtgacagtccatcacttcaagacttc
ctcctcactgctgctgatatactgggcctgtgcttaaccgtcaaactggtggttctgagg
ttgtacccggagtccagcagcagggtgacagctgacggggtggtgggtctgacccgggcc
ttcttagctgcgggtgtccagtgtgtgtgtgtctccttgtggcctgcaccgatagctgcc
tccaaactgttaacacacaccttctatacagcacttctcaacggcaccaaagccagtgct
gctctgactgaggccatgaagacactgcagagcagcaagcacttctcacacccctccaac
tgggctggttacatgttgattggaaatgatgtgaagctgaacagccccatgtcgctggtg
ggccaagccctggcagagatcctgcagtatccagacagagccagggatgccctcagagtg
ctgttacacttgattgagaagtctttgcagcgcattcagagtggccagtgtaacccaatg
tacacatcccagcaaagcgtggagaataaggtcggcggggtgcccgggtggcaggccctc
ctgtctgcggtgggtttccggttggacttctccggtagcgtcgcaggactctcctcggcg
gtgttcttcccccagtcagaccctggagatcggctgcagcagtgcagcaccactttacag
gccctgcttggtctgactcctccagctctgcaggccctctgtaagcttgtcacagcgtct
gaggccggagaacagctcattcacaaggccgttaaaagcatggtgggaatgcttcaccaa
gtgttggtgcagttgcagtctggcgacaaagagcaggacttctcactggctcccattcaa
gtgtccataagtgtgcagctctggaggctcccgggctgccacgagtttctagcagcactc
ggtgagtcagtaagaataaaagaagctatgctttcatttccttctaatgtcttagttact
ttcctccactcgccctccctctcaggcttcgatctttgtgaggtgggtcaggaggaggtc
gtgctgaagactggaaaacaggccagcagacgcaccatgcattttgctcttcagtccctc
ctggcgctttttgactccacagagcttcccaagcgactgagcatggacagctcttcctcc
ctggagtccctgtcgtcctcccagtccgcctcccagcctcactctttacccctctctttc
ggttgctacccacctcagccctccttcctgcccccagtctgcccggacaacctctcctgc
gatgccatctctgtctacagcctcagctccctcgcctcctctctcagtttcttgtccaga
ccagagcctgcaggaagtgacaccatcagtcagcgcttgcatcaacaggagccagacaga
tctcgtgcgggggcaggcctctacgcctccctccgtccttcaggcggcctctcaagaggt
cgactccccaatcatggaggagcagcaggagaaggggaagacgaggagtatgagggatac
tccattataagcagtgagccgttaggacgaggagggagggactgtgacacgctgccactt
cctgcaggacacagacatggcagaggcggagcagggagaggatctaatggaggtcatagg
tatcctatcacgatttcctccaagggaagcatcagcacacctacatcccccattaaagct
ccaccgctgcccccaactgtttcctccaaccccaagctcaggcaggaaatctcatctcct
cagaggacaaggaaagggaaggttagcagctctgagtcggaccagtcgagtactgagaca
gacagcacggtcaagtctcaggaggagaggatggggcctgcgggacaaatggatccacag
gaactggcccagaagatcctggaggagacccagagccacatgcaagcagtggagagccta
cagaaggcaaacatgagagggaagacactgacagggcctgaggggagagaggaggcacat
gccagacagccatttcactctactcccacaacgccaactttgactcccactgggggagca
cgtgggtttcagccctcagagaccagtgcatttagcaggccacccagtagagcaagtcta
aaagcttgctcgtctcctctttctcttcctcgacatcgttcgcccctctccacttctgtc
tcaacacctcccgcgactcggcctaaaccaccctcacgctcgtcttcgctacagaaaatc
agctcaggctacaacagtccagctcattcgtcttcgtccttatctctctctggaaaagag
cagggttcgccttcctccatggcttcccctgatgtgcatgcgctggctcagctcaaactg
aaataccctccctcgccttactccgcccacatctcaccttcccgctctccggccgacagt
gccccatcgccagctctttcctactcctccacaggatctgtttcaggctcttccagcccg
gccaacacccctgaactgaaccagtcaaaacacgacaacaaagtccaggcagttcataac
ttgaaaaccttctgggccaacgccagccagaagcacgaggtgccctgccctgccagtttt
ctccgggggggaaataaaagaatgagtacagttcagaaagatgttctgggtttgctgaat
ctgtcacctaaccgcgagtctctaagcaaaaacgtagaaggatccgaggatcagaactct
gacaacagaccaaatggtcaccaaaaactggaggctaaaccacccccacctccagctgct
actgttcccacaaactctaaaggaggcagcagacttccctctgggaatggcttcaagttt
ctctcacctggacatttttttccgtcttctaaatgttga
DBGET
integrated database retrieval system
