Hippoglossus hippoglossus (Atlantic halibut): 117771234
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Entry
117771234 CDS
T07778
Symbol
oclna
Name
(RefSeq) LOW QUALITY PROTEIN: occludin
KO
K06088
occludin
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03272
Virion - Hepatitis viruses
hhip04514
Cell adhesion molecules
hhip04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
117771234 (oclna)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
117771234 (oclna)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117771234 (oclna)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hhip01009
]
117771234 (oclna)
Protein phosphatases and associated proteins [BR:
hhip01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
117771234 (oclna)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Occludin_ELL
MARVEL
CCDC22_CC
Yip1
Swi5
NagJ_C
Syntaxin
APG6_N
FapA
SUR7
Motif
Other DBs
NCBI-GeneID:
117771234
NCBI-ProteinID:
XP_034457240
LinkDB
All DBs
Position
12:complement(2489250..2498217)
Genome browser
AA seq
503 aa
AA seq
DB search
MSSVPNGSPPPYEEDGFTAAPQTAYSYYPDDEFQHFYRWTSPPGILKIMGIIVIVMCVGI
FACVASTLAWDTQGGMGGMGVMGGMGGMGGMGGMGGYGGGYGGGSYGGGGYGAGNNYGYG
NIGGNYNDPRSGKGFIIAMAAITFIAGLVIFIIIVSHQKLSESRKFYLAVMIICAILALL
MLIASIVYLMAVNPMAQSSGSVYSSQIAGLCAQYQQPQTTGMFVNQYLYHYCVVEPQEAI
AVVFGFLVAVALIVMLVFALKTRQKIGNYGKSNILWRKVKIVDEMAPPQDVEAWVNNVSG
PPEELPISDYPNKLRGSRSHLDDESTNYDKPPYNYSPQPHVENHALLQNGAPYSSNSEVA
SSAGRHKKRRAGRPRRADGQDYETDYNSSGDELDDNDFDSEFSPITNEKERYDCKHEFDR
EHQEYKDLQAELDAINKSLSEVDRELDELEEGSPQYLDALDEYNRIKNTKKSADYQVKKR
RCKYLKSKLNHLKKKVSDYDRRA
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcggtgcccaatgggagtccacctccctatgaggaagatggatttaccgccgct
ccgcagacggcctattcttactatccagatgatgagttccagcatttctaccgctggacg
tctccaccaggcatcctcaaaatcatgggcatcatagtcatcgtgatgtgcgtcggcata
tttgcttgtgtagcctccactctggcttgggacacccagggaggcatgggtggtatgggt
gttatggggggtatgggaggtatgggaggtatggggggtatggggggctacgggggaggt
tatggcggcggctcctatggaggcggcggctatggagctggaaacaactatggctacggt
aacatcggagggaactacaatgacccccgatcaggcaaagggtttatcattgccatggca
gccatcaccttcatcgccggcctggtcatcttcatcatcattgtgtcccatcagaaacta
tcagagagcaggaagttctacctagcagtgatgatcatctgtgccatcctagcactgcta
atgctaattgcgtccatagtatacttgatggcagtgaaccccatggcgcagtcctctggg
tctgtctattccagccagattgctggcctgtgtgcccagtaccaacaaccacagactaca
ggaatgttcgtcaaccagtacctctaccactactgtgtggtggagccacaagaggccatc
gccgtggtgtttggcttcctggtcgccgtcgctctgatcgtcatgctcgtctttgctctg
aagactcgccagaaaatcggaaactatggcaagagcaacattctgtggaggaaagtgaag
atcgtcgacgagatggcgccacctcaggatgtggaggcatgggtgaacaatgtgtccggt
ccccctgaagagctcccgatctcagattaccctaacaagctgagaggctccaggagccac
ctggatgacgagagcacaaactacgacaaacctccctacaactactcgccacagcctcat
gtggaaaaccacgcgctgttgcagaacggggctccctacagcagtaactcagaggtggcc
agctcggctggacggcacaagaagaggcgtgcaggtcgccctcgccgcgccgatggacag
gactatgaaaccgactataactcctcaggggacgagctggacgacaacgactttgacagt
gaattctctccgataacaaacgagaaggagcgctacgactgcaagcatgaattcgaccgc
gaacaccaggagtacaaggacctgcaggcggagctggacgccatcaataagagtctgtcc
gaggtggacagagagctggacgagctggaggaggggagcccacagtacctggatgccttg
gatgagtacaacaggataaagaacaccaaaaagtctgcagattatcaggtgaagaagcgc
aggtgtaaatatctgaagtccaaactgaaccacctcaagaagaaggtcagtgattatgac
cgcagggcctga
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