Hippoglossus hippoglossus (Atlantic halibut): 117771262
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Entry
117771262 CDS
T07778
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117771262
03041 Spliceosome [BR:
hhip03041
]
117771262
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
117771262
Spliceosome [BR:
hhip03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
117771262
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GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
117771262
NCBI-ProteinID:
XP_034457319
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Position
12:complement(5512095..5522065)
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AA seq
384 aa
AA seq
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MDDDQPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTP
NETTSTKQLSFDEVVSQSSPSNCTVYCGGVTTGLTEQIMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVHMPQNTVSFAAQPY
SQWGQWYSNTQQIGQYVPNGWQVPSYGVYGQTWDQQGYNHLHAGAGWTGVGAVSNGSMVE
PGQGVNGTMLTNQAGMSAAGYHTH
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgaccagcccaaaaccctgtatgtggggaatctgtcccgggacgtgacagag
gccctcatcttggagttgtttggccaaattggaccttgcaagagctgtaaaatgatagta
gatacggcaggtcatgatccatactgctttgtggagttctatgagcatagacatgccact
gccacaattgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccacaacgccaaccagtcaaaagaaagacacaagcagtcacttccatgtctttgttggg
gatcttagtcctgaaattaccacagatgacataaaagcagcttttgctccttttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtgtccttcttcaacaaatgggatgcagagaatgccatacagcagatgggagggcagtgg
ttgggaggcaggcagatcaggaccaactgggccacgaggaagcctgctcctaaaactcca
aatgaaacaaccagtaccaagcagctgtcctttgatgaggtggtgagccagtccagcccc
agcaactgcaccgtctactgtggaggagtcacaacaggcctcacagagcaaattatgaga
cagaccttctcacccttcggccaaataatggaaatccgtgttttcccagacaaaggctac
tcatttgttaggttcaactcccatgaagcagcagctcatgccattgtctcggtcaatggc
acgtccatagagggctatgttgttaagtgttactggggcaaagaaacaacagacatggtt
agccccattcagcaggtacatatgccacagaacacggtgagcttcgcggcgcagccctac
agccagtggggtcagtggtacagtaacacgcagcagattggtcaatatgtgcccaatgga
tggcaggtgccaagctacggagtttatggacagacctgggatcagcagggctacaatcat
ttacatgctggtgccggatggacaggagtgggcgccgtgagcaacggcagcatggtagag
cctggacagggagtcaacggaacgatgctaaccaaccaggccggcatgagcgctgctggc
taccacacccactga
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