Hippoglossus hippoglossus (Atlantic halibut): 117771290
Help
Entry
117771290 CDS
T07778
Symbol
sptan1
Name
(RefSeq) spectrin alpha chain, non-erythrocytic 1 isoform X1
KO
K06114
spectrin alpha, non-erythrocytic (fodrin)
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04210
Apoptosis
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
117771290 (sptan1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
117771290 (sptan1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117771290 (sptan1)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117771290 (sptan1)
Intermediate filaments
Intermediate filament-binding proteins
117771290 (sptan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spectrin
EFhand_Ca_insen
SH3_1
EF-hand_1
SH3_9
EF-hand_7
EF-hand_6
SH3_2
EF-hand_8
SH3_3
SH3_10
SCO1-SenC
Motif
Other DBs
NCBI-GeneID:
117771290
NCBI-ProteinID:
XP_034457366
LinkDB
All DBs
Position
12:20447786..20475163
Genome browser
AA seq
2479 aa
AA seq
DB search
MDTAGVKVLETAEDIQERRQQVLDRYRRFKDLSITRRAKLEDSYSFQFFRRDADELEKWI
QEKLQIASDENYKDPSNLQGKLQKHQAFEAEVQANSSAIIKLDDTGNRMITEGHFASEII
RTRLEELHRLWDLLLQRTKEKGTRLLQAQKLVQYLRECEDALDWISDKETMATSEELGQD
LEHVELLQKKFEEFQTDLAAHEERVNEVNQLAAKLIQESHPEAELIVRKQDEVNAAWQRL
KGLAQQRQGKLFGAAEVQRFNRDVDETISWIKEKEQLMASDDFGRDLASVQALLRKHEGL
ERDLAALEDKVNTLGGDAEHLQQTHPQNASQIHLKKDELVNNWEQIRTLAAERRARLNDS
YMLQRFTADFRDLTSWVTEMKALINADELANDVAGAEALLDRHQEHKGEIDAHEDSFRAT
DEAGRALLNTGHYASEEVKEKLGVLTEEKESLLELWEVRRQQYEQCMDLQLFYRDTEQVD
NWMSKQEAFLLNEDLGDSLDSVEALLKKHEDFEKSLSAQEEKITALDEFATKLIQNNHYA
KEDVATRRDALLSRRNALHERAQSRRAALEDSFHLQQFFRDSDELKSWINEKMKTATDEA
YKDPSNLQGKVQKHQAFEAELSANQSRIDALQKSGQELLDGKHYASTEVDGRMEEVSSQW
KKLLEATELKGIKLREANQQQQFNRNVEDIELWLYEVEGHLASDDYGKDLTSVQNLQKKH
ALLEADVAAHQDRIDGITIQARQFQEAGHFDADNIRKKQEALVVRYEALREPMAARKQKL
SDSLRLQQLFRDMEDEETWIREKEPIAASTNRGKDLIGVQNLLKKHQALQAEISGHEPRI
KAVTQKGEAMVEEGHFAVEEVKVKLADLHGRWDTLKAKASQRRQDLEDSLQAQQYFADAN
EAESWMREKEPIVGSPDYGKDEDSAEALLKKHEALMSDLSAYGSSIHSLKEQATSCRQQV
APTDDETGKELVLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVNDRQGFVPAAY
VKKLDPTQSSSRENLLDDHGSIALRQDQIDNQLVTKEACSVSVRMKQVEELYGTLLELGE
KRKDMLEKSCKKFMLFREANELQQWINEKESALTNEEVGSDLEQVEVLQKKFDDFQKDLK
ANESRLRDINKVASELESEGLMAEEAPMVQAQQQEMLSSAHGKDEADSKTASPWKNIRLA
VQTTANFNTIKELNNRWRSLQQLAEERSNMLGSAHEVQRFHRDADETKEWIEEKNQALNT
DNYGHDLASVQALQRKHEGFERDLAALGDKVNSLGETAERLIQSHPEAVDDIQEKCTELN
TAWSSLVGRADQRKDKLGNSHDLQRFVSDFRDLMSWINGIRGLVSSDELAKDVTGAEALL
ERHQEHRTEIDARAGTFQAFEQFGQQLLARGHYASPEIQQKLEALDHERAELEKAWVQRR
MMLDQCLELQLFNRDCEQAENWMAAREAFLASDDKGDSLDSVEALIKKHEDFDKAINVQE
EKIAALQSFADQLVGADHYAKPEISNRRDEVLDRWLRLKTQMIEKRSKLGESQTLQQFSR
DVDEIEAWISEKLQTATDESYKDPTNIQLSKLLSKHQKHQAFEAELHANADRIRGVIDTG
NTLIQRGACAGSEDAVKARLSALDEQWQFLVNKSAEKSQKLKEANKQQNFNTGIKDFDFW
LSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNGQADSLMGSSAFDTT
QVKDKRDAVNGRFAKIKSMAAGRRAKLNESHRLHQFFRDLDDEESWIKEKKLLVSSEDYG
RDLTGVQNLRKKHKRLEAELGAHEPAIQSVLDTGKKLSDDNTIGQDEIQQRLAQFVDHWK
ELKDLSGARGQRLEESLEYQQFVANVEEEEAWINEKLNLVGSEDYGDTLAAVQGLLKKHE
AFETDFTVHRDRVNDVCSNGEELIKKNNHHVDNISAKMSALRGKVSELERAAAQRKAKLD
ENSAFLQFNWKADVVESWIGEKENSLKTDDYGRDLSSVQTLLTKQETFDAGLQAFQQEGI
TNITALMDQLLAAKHVQSKAIEARHAALMKRWNQLLSNSASRKKKLLEAQEHFRKVEDLF
LTFAKKASAFNSWFENAEEDLTDPVRCNSLEEIRALREAHDAFRSSLSSAQADFNQLAEL
DQQIKSYQVVSNPYTWFTMEALEETWRNLQKIIKERELELQKEQRRQEENDKLRQEFAQH
ANAFHQWLQETRTYLLDGSCMVEESGTLESQLEATKRKHQEIRAMRSQLKKIEDLGAAME
EALILDNKYTEHSTVGLAQQWDQLDQLGMRMQHNLEQQIQARNTTGVTEEALKEFSMMFK
HFDKEKSGRLNHQEFKSCLRSLGYDLPMVEEGEPDPEFEAILDTVDPNRDGNVSLQEYMA
FMISRETENVKSSEEIESAFRALSTENRPYVTKEELYQNLSKEQADYCLSHMKPYLDSKG
RELPSAFDFVEFTRSLFVN
NT seq
7440 nt
NT seq
+upstream
nt +downstream
nt
atggacactgcaggggtcaaggtgctggagacagccgaggacatccaggagcgccggcag
caggtgctcgaccgctaccgtcgcttcaaggatttgtcgattacgcggcgggcgaaactg
gaggactcgtacagcttccagtttttccgccgtgacgcagacgagttggagaagtggatc
caggagaagctgcagatcgcctccgatgagaactacaaggacccgtccaacctgcagggt
aagctgcagaaacatcaggcgttcgaagctgaagttcaggccaactccagtgccatcatc
aaactggacgacactggaaaccggatgatcacagagggacacttcgcctctgagatcatt
cgaactcgtctggaggagctgcatcgtctgtgggacctgctgctgcaaaggaccaaggag
aagggcacgcgtctgcttcaggcacagaaactggtccagtacctgcgtgagtgtgaggat
gccctggactggatcagcgataaggagaccatggccacctctgaggagctgggccaggac
ctggagcacgtggagctcctgcagaagaagtttgaggagttccagaccgacctggcggct
cacgaggagcgtgtgaacgaggtgaaccagctggcagcaaagctgatccaggagagtcac
cccgaggccgagctcatcgtgcgtaagcaggacgaggtgaacgcggcctggcagcgcctg
aagggtctggcccagcagaggcaggggaagctgttcggagctgctgaggtgcagcgcttc
aacagggatgtggatgagaccatcagctggatcaaggagaaggagcagctgatggcctct
gatgattttggtcgtgacctggccagtgtgcaggcgctgctgcgtaaacacgagggtctg
gagagagacctggctgctctggaggataaagtcaacactctgggcggtgatgcagagcac
ctgcagcagacacatccacagaacgcctcccagatccacctgaagaaggacgaactcgtc
aacaactgggaacagattcgcactctggctgccgagcgccgtgcccgcctcaacgactca
tacatgctgcagcgtttcacggctgacttcagggatctgaccagctgggtgacggagatg
aaggccctgatcaatgctgacgaactggccaatgacgtggctggagcagaggctctgctg
gaccgccaccaggagcataagggagagattgatgctcacgaggacagtttcagagccact
gatgaagcgggtagggctttactgaacacgggacactacgcttctgaggaggtcaaggaa
aagctgggcgtcctcactgaggagaaggagtctctgctggagttgtgggaggttcgcagg
cagcagtacgagcagtgcatggacctgcagctcttctacagggacactgagcaagttgac
aactggatgagtaaacaagaggcgttcctcctgaacgaagacctgggtgactctctggac
agtgtcgaggctctgctgaagaaacatgaggactttgagaagtctctgagtgcccaggag
gagaagatcactgccctggatgagtttgctaccaaactgatccagaacaatcactatgcc
aaagaagacgtggccacccgtagagatgctctgctcagccgtcgtaacgccctgcatgag
cgtgctcagtctcgccgagccgccctggaggactctttccacctgcagcagttcttcagg
gactctgacgagctcaagagctggatcaacgagaagatgaagactgccactgatgaggct
tacaaggacccctccaacctgcagggcaaggtgcagaaacaccaggcttttgaagctgag
ctgtcggccaaccaaagccgcatcgatgctctgcagaagagtggccaggagctgctggac
gggaaacattacgcctccactgaggtggatggacgcatggaggaggtcagctcccagtgg
aagaaactgctggaagccactgaactcaaaggcatcaagctccgtgaggccaaccagcag
cagcagttcaacaggaacgtggaggacattgagctgtggttgtacgaggtcgaaggtcac
ctggcttcagacgactacggcaaagacctgacgagtgtccagaacctgcagaagaaacac
gctctgctggaggcggacgtggccgctcaccaggatcgtatcgacggcataacgattcag
gctcgccagttccaagaggcgggacattttgatgccgacaacatccgcaagaaacaggaa
gcgttggttgttcgttatgaagctctgcgtgagcccatggccgcacgcaagcagaaactg
tccgactcactcaggctgcagcagctgtttagagacatggaggatgaagagacttggatc
cgtgagaaagagccgatcgctgcctccactaaccgaggcaaagacctgatcggtgtccag
aacctgctgaagaagcaccaggccctgcaggcggagatcagcggtcatgagcctcgcatc
aaggctgtcacccagaaaggagaggccatggtcgaggaaggacactttgctgtcgaggaa
gtgaaagtgaagctggctgatcttcatggacgctgggacacgctgaaggctaaagcgtcc
cagaggagacaggacctggaggactctctgcaggctcagcaatactttgcagatgccaat
gaggccgagtcttggatgagggagaaggagccgatcgtggggagcccagactatggaaaa
gatgaggactctgctgaggctctgctgaagaagcacgaggctctgatgtcggacctgagc
gcctacggcagcagcatccacagtctgaaggaacaggctacgtcctgcaggcaacaagtg
gcgccgactgatgacgagaccgggaaggagctggtcctcgctctgtatgactaccaggag
aagagcccccgcgaagtgaccatgaagaaaggagacatcctgacgctgctcaacagcacc
aacaaggactggtggaaggtggaggtgaacgatcgtcagggtttcgttcctgctgcgtac
gtgaagaagcttgaccccacccagtcgtcctccagggaaaacctgctggatgaccacggc
agcatcgcactgcgacaggaccagatagacaaccagcttgtcaccaaggaggcctgcagc
gtgtctgtgcgcatgaagcaggtggaagagctgtacggcactctgctggagctgggagag
aaacgtaaagacatgttggagaagagctgcaagaagttcatgttgttccgcgaggccaac
gagctccagcagtggatcaacgagaaggagagcgccctcaccaacgaagaggtcggctcg
gacctggagcaggtcgaggtcctgcagaagaagtttgacgacttccagaaggacctgaag
gccaacgagtctcgtctgagggacatcaacaaagttgcgtctgagctggagtctgaaggc
ctcatggcggaggaggcgcccatggttcaggctcagcaacaggagatgctcagttctgct
catggcaaggacgaagctgattctaagactgcgtctccctggaagaatatacgattggct
gttcaaacaacggctaactttaatactatcaaggagctgaataatcgctggcgctctctg
cagcagttggctgaggagaggagcaacatgctgggcagtgcacacgaggtgcagcgattc
cacagagatgctgacgaaactaaagagtggattgaggagaagaaccaagctctcaacact
gacaactacggccacgacctggccagtgttcaggctctgcagcgcaaacacgaaggcttc
gagagagacctggccgccctcggggacaaggtgaactctctgggcgagacggcagagcgt
ctgatccagtcccacccagaggccgtggatgacatccaggagaagtgcaccgagctgaac
accgcctggagcagcctggtgggtcgcgctgaccagcgcaaagacaaactgggaaactcc
catgacctgcagcgcttcgtgtcggacttcagagatctgatgtcctggatcaatggcatc
cgagggctcgtgtcctcagatgagctggcaaaggatgtgactggagccgaggctcttctg
gaaagacaccaggaacaccgcacggagatcgacgctcgtgctggaaccttccaggccttc
gagcagttcggccagcagctgctggcgcgaggccactacgccagtcctgagatccagcag
aaactggaggctttagaccatgagcgtgccgaactggagaaggcctgggtgcagcgtcgc
atgatgttggaccaatgcctcgagcttcagctcttcaacagagactgtgaacaggccgag
aactggatggcagctcgtgaagcgttcctcgccagcgacgacaagggcgactccttggac
agcgttgaagcgctcatcaagaaacatgaagactttgacaaggccatcaatgtgcaggag
gagaagatcgccgccctgcagtcctttgctgatcagctggtcggagctgatcattacgcc
aaacctgagatctccaaccgccgcgatgaagtcctggacaggtggctccggctgaagacc
cagatgatcgagaagcgttcgaagctgggtgaatctcagactctgcagcagttcagccga
gatgtggacgagatagaagcttggatcagcgagaagctgcagactgcgactgatgaatcc
tacaaagacccaacgaacatccagctgtccaagctgctgagtaagcatcagaaacatcag
gcgtttgaggcggagctgcacgccaacgcagacaggatccggggcgtcatcgatactgga
aacaccctgattcagagaggagcctgcgccggcagcgaggacgctgtgaaggcacgactc
agcgctctggacgagcagtggcagttcctcgtcaacaaatcagcagagaagagccagaaa
ctgaaagaggccaacaagcagcagaacttcaacaccggcatcaaggactttgacttctgg
ctctctgaggtcgaagctcttctggcatctgaggattatggtaaagatctggcctcagtc
aacaacctgctgaagaaacaccagctgctggaggctgatatctctgcccacgaggatcgt
ctgaaggacctgaacggccaggccgacagcctgatgggcagcagcgccttcgacaccacg
caggtgaaggacaagcgcgatgccgtcaacggccgcttcgccaagatcaagagcatggca
gccgggcgccgagcgaaactcaacgagtcgcaccgcctgcatcagttcttcagggacctg
gatgatgaagagtcttggatcaaagaaaagaagttgctcgtgagttcggaggactacgga
cgtgatttgacaggtgtacagaatctgaggaagaaacacaagagactggaggccgagctg
ggagcgcacgagccggccattcagtcggtgctggacactgggaagaagttgtctgatgac
aacaccatcggtcaggacgagatccagcagagactcgcccagtttgtcgaccactggaag
gagctcaaagacttgtctggagcgaggggacagagactggaggagtcgctggagtaccag
cagtttgttgcgaatgtggaagaggaagaagcttggatcaatgagaagttgaatctggtc
gggagcgaggattacggagacacactggcggctgtgcagggcctgctgaagaagcatgaa
gcctttgagacggacttcaccgtccacagggacagagtcaacgacgtgtgttcgaacgga
gaggagctgatcaagaagaacaaccatcacgtggacaacatcagtgccaagatgtcggct
ctgagagggaaagtgtccgagctggagagggctgcagctcagaggaaggcgaagctggat
gagaactctgccttcctgcagttcaactggaaggccgacgtggtcgagtcctggatcggt
gagaaagaaaacagcttgaagaccgacgactacggcagagacctgtcgtctgtgcagact
ctgctcaccaagcaggagaccttcgacgccggcctgcaggccttccagcaggagggcatc
accaacatcacagctctgatggaccagctgctggccgccaagcacgtccaatcaaaagcc
atcgaagctcgtcatgccgccttgatgaagcgctggaaccagctgctgtccaactcagcc
tctcgcaagaagaagcttctcgaggctcaggaacatttcagaaaggttgaagacttgttc
ctcacatttgccaagaaggcgtcggccttcaacagctggtttgagaacgcagaggaggat
ctgaccgacccggtgcggtgcaactctctggaggagatccgggcgctgcgtgaggcccac
gacgctttccgctcctcgctgagctcggctcaggccgacttcaaccagctggccgagctg
gaccagcagatcaagagctaccaggtggtgtccaacccctacacctggttcaccatggag
gcgctggaggagacgtggaggaacctgcagaagatcatcaaggagcgagagctggagctg
cagaaggagcagaggcgacaggaggaaaacgacaagttgcgtcaggagtttgctcagcac
gccaacgccttccaccagtggctgcaggagacgaggacgtatctgctggacgggtcgtgt
atggtggaggagtctggaaccctggagtcgcagctggaggccaccaagcgcaaacatcag
gagatccgggcgatgcgcagtcagctgaagaagatcgaagatttgggtgcagcgatggag
gaagcgctgatcttggacaacaagtacacggagcacagcacagtgggtctggctcagcag
tgggaccaactggaccaactgggaatgaggatgcaacacaacctggagcagcagatacag
gccagaaacaccaccggagtgacggaggaggcgctgaaggagttcagcatgatgttcaag
cacttcgacaaggagaagtccgggcgtctgaaccaccaggagttcaagtcctgtctgcgc
tcgctgggctacgacctgcccatggtggaagagggagagcctgatcccgagttcgaggcc
atactcgacaccgtggaccccaacagggacgggaacgtgtcgttgcaggagtacatggcg
ttcatgatcagccgtgagacagagaacgtgaagtccagcgaggagatcgagagcgcgttc
cgagctctgagcaccgagaacagaccctacgtcactaaagaggagttgtaccagaacctg
agcaaggagcaggccgactactgcctctcacacatgaagccctacctcgacagcaagggc
cgcgagctgccgtcagctttcgactttgtcgagttcacccgctcgctcttcgtcaactga
DBGET
integrated database retrieval system
