Hippoglossus hippoglossus (Atlantic halibut): 117771294
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Entry
117771294 CDS
T07778
Symbol
myo5b
Name
(RefSeq) unconventional myosin-Vb isoform X1
KO
K10357
myosin V
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
117771294 (myo5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hhip03019
]
117771294 (myo5b)
04131 Membrane trafficking [BR:
hhip04131
]
117771294 (myo5b)
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117771294 (myo5b)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117771294 (myo5b)
Messenger RNA biogenesis [BR:
hhip03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
117771294 (myo5b)
mRNA cycle factors
P-body specific factors
117771294 (myo5b)
Membrane trafficking [BR:
hhip04131
]
Others
Actin-binding proteins
Myosins
117771294 (myo5b)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
117771294 (myo5b)
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
117771294 (myo5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myo5a
DIL
IQ
Myosin_N
AAA_22
Ac76
AAA_16
Motif
Other DBs
NCBI-GeneID:
117771294
NCBI-ProteinID:
XP_034457381
LinkDB
All DBs
Position
12:19967795..19987192
Genome browser
AA seq
1841 aa
AA seq
DB search
MTGQYYPYSKFTRVWIPDPEDVWTAAEITRDYKEGESVLHLKREDETPLEYPVGPKSNPL
PFLRNPDILVGENDLTALSYLHEPAVLHNLRVRFVESNHIYTYCGIVLVAINPYEQLQIY
GEEVINAYSGQNMGDMDPHIFAVAEEAYKQMSRDERNQSIIVSGESGAGKTVSAKYAMRF
FATVGGSANDTNVEEKVLASSPIMEAIGNAKTTRNDNSSRFGKYIQIGFSRQYHIIGANM
RTYLLEKSRVVFQAEDERNYHIFYQLCASASLPEFKDLSLTSAEDFTYTSLGENIFIEGV
NDAEDLKKTREAFTLLGVKDSSQGNIFRIMASILHLGNVEICSERDGESCRVLKDDAHLM
HFCRLLGVELKQMEHWLCHRKLATTSETYVKNMSSKQAANARDALAKHIYARMFDWIVEH
INRSLHTSSKQHSFIGVLDIYGFETFEINSFEQFCINYANEKLQQQFNSHVFKLEQEEYM
KEQIPWTLIDFYDNQPCIDLIEARLGILDLLDEECRVPKGTDVNWAQKLYQHHTSKAQFQ
KPRMSNTSFIIIHFADKVEYQCEGFLEKNRDTVYEEQINILKASQLQLVADLFHEKDDAP
PSKNSRVNVRAAKSTPRAPNKEHRKTVGHQFRSSLHLLMETLNATTPHYVRCIKPNDFKE
PFSFDSSRAVQQLRACGVLETIRISAAGYPSRWTYPDFFSRYRVLMKKSDMTSSDKKLVC
KNLLGTVIKEPDMFQFGKTKIFFRAGQVAYLEKLRADKFRAACIKIQKTVRGWLQRVRYR
KIRKTAITLQRYGRGYLARRYAEYLRLTRAALVCQKQYRMVRDRRAYLRVRKAVVTIQAY
AKGMFTRRIYWEFLLHHKAMIIQKSVRGWLQRKKFKRARNAAIIIQCAFRRTQAKKLLKE
RKIEARSAQHLKNLNTGMENKIVQLQRKMDDQSKELKTQNVQLQTVNVSMGSEVNKLRKE
LEQVRGQRGEGGQLTSLQDELERLKAELQEAHALRKRLEEEHGSEKMSLEQRVEELEKEN
SLLKSEKEEMNQKILQQTKNSQDMDSSVSQTEVSLQKELDAERQRYQNLLKEISRVEQKY
ENLKEELSLTKFQPGHMRNPSNQSSLESDSNYPSVSTSEVGDTEDSVQLVEEMGVEKAAM
DISLFMKLQKRVRELEQERKRLQTSVDKMEELAKHRSSEPRSPTSELEIADLAYNNLKRE
ELESENKKLKNNLNDLRKSIAERAAQNNSSNELQDGYNLLLSQLKSANEELDARKEEMLI
LRTQIVKNAQLQEKNQQVQQSNNAPEAPEAPEVPEVTEVPEVTEVPEVTEVTEVPEDKEE
ALKAYQGLTESKRLLEAQLQTQSRQHKDELEALHTQIELLKADIEKKQEILNYTMSLSPE
AQVDYSVQQEITRLTNDNLDLKELVEKLEKNERKLKKQLRIYMKKVQELEASQAAALSSR
SRPELSRQVTVQRKEKDFEGMLEYYKEDEALLAKTLITDMKPNTVSATVPCLPAYILFMC
IRHADYINDDEKVESLLTSTINSVKKVLKKNSDDFETTSFWLANTSRLLHCLKQYSGDEV
FMTQNSPKQNEHCLKNFDLAEYRQVLSDLSIQIYQQLIKVAEGIIQPMIVSAMLESESIP
SLAGVKPMGYRNRSSSMDTDGPSSYTLEALIRQLGQFHSIMRDHGLDPEIVGQVVRQLFH
CINAVTLNNLLLRKDVCSWSTGMQLRYNTSQLEEWLRGNNLYQSKAAAILEPVIQAAQLL
QVKKKTSQDAEAICSLCIALTTQQIVKVLNLYTPLNEFEERVTVSFIRDIQTRLQVRNDP
PQLLIDTKHTFPVLFPYTPSALSLETLHIPASLGLDFLVRV
NT seq
5526 nt
NT seq
+upstream
nt +downstream
nt
atgaccgggcaatattacccttactccaagttcactcgggtttggatcccggaccctgag
gatgtgtggacggctgcagagatcaccagagattacaaagaaggagaatctgttcttcac
ctcaaacgtgaagatgaaacgcctctggagtatcctgtgggtccaaagagcaaccctctt
cccttcctccgtaaccccgacatcctggtcggggagaacgacctcacggctctcagctac
ctgcatgaacctgcggtgctacacaacctccgggttcgattcgtggagtccaaccacatc
tacacatactgtgggattgttctggtggccattaacccgtatgagcagctgcagatttat
ggagaggaggtcattaacgcctacagtggacagaacatgggcgacatggacccacatata
tttgctgtggctgaagaagcgtacaaacagatgtccagagacgagaggaatcagtccatc
atcgtgagcggagaatctggagcaggaaagacggtttctgcaaagtacgccatgcgtttc
tttgccacagtgggaggttcagctaatgacactaacgtggaggagaaggtcttggcctcc
agtccgatcatggaggccattggaaacgcaaaaaccacccgaaacgacaacagcagtcgc
ttcggaaagtacattcagatcggcttcagtcgacagtaccacatcatcggagccaacatg
cggacgtacctgctggagaagtctcgggttgttttccaggctgaggacgagaggaattat
cacatcttctatcagctctgcgcttctgccagtttaccagagtttaaagacctcagcctc
accagtgcagaagacttcacctacacgtcgttaggggagaacatcttcatcgagggagtg
aacgacgctgaggacttaaaaaagaccagagaggcgttcacgctgctgggtgtgaaggac
agtagtcagggcaacattttcagaataatggcgtccatccttcatctggggaacgtagag
atctgctcagagagagacggagagtcgtgtcgtgtcttgaaggacgacgcccacctgatg
cacttctgccggctgctgggggtggagctgaagcagatggagcattggctctgtcacagg
aagttggctacgacctcagagacgtacgtgaagaacatgtccagcaagcaggccgccaac
gcccgtgacgccctcgccaaacacatctacgcccgcatgtttgactggatcgtggaacac
atcaacaggtctctgcacacgtcgtccaaacagcactccttcattggcgtcctggacatc
tacgggttcgagacgtttgagatcaacagttttgaacagttctgcatcaactacgccaac
gagaagcttcagcagcagtttaactctcatgtgtttaaactggagcaggaggagtacatg
aaggagcagattccctggactctgatcgatttctatgataatcagccgtgtatcgacctg
atcgaggctcgactcggcatcctggacctgctggacgaggagtgtagggttccgaaggga
accgacgtgaactgggctcagaagctctaccaacatcacacaagcaaagctcaatttcag
aaacctcgtatgtccaacacgtccttcatcatcatacacttcgctgacaaggtggagtat
cagtgtgaaggttttctggagaagaaccgagacaccgtgtacgaggagcagatcaacatc
ctgaaggccagtcagcttcagctcgtagcagatctgtttcacgagaaagacgatgccccc
ccctcaaagaactccagggtgaacgtccgcgcagccaagtcgactccgcgagcgcccaac
aaggagcacaggaagacagtgggacaccagttccgcagctctctgcatctcctcatggag
actctgaacgccacgacgcctcactacgtccgctgcatcaaacccaacgacttcaaagag
ccgttctcgttcgactcgagtagagcggtgcagcagctccgagcttgtggcgttctggag
acgatccggatcagtgcggccggatacccgtccaggtggacgtatcctgatttcttcagc
aggtatcgagtgttgatgaagaaatctgacatgacgtcatctgataagaagcttgtctgt
aaaaacctgctggggacggtgatcaaggagccagacatgttccagtttggaaagacgaag
atcttcttccgggcgggccaggtggcgtacctggagaagctccgcgctgataagttccga
gcggcgtgcatcaagatccagaagacggttcgaggctggctgcagagagtccgataccga
aagatccgcaagactgccatcactctgcagagatatggccgaggttacctggcccgcagg
tacgccgagtacctgcgtctgactcgagcagcactcgtctgtcagaaacagtatcggatg
gtgagagatcgacgggcgtatctgagggtgaggaaggcggtcgtcaccatccaggcctac
gctaaagggatgttcacacgcaggatttactgggagttcctcctgcatcacaaggccatg
atcatccagaagagcgtccgtggctggttgcagaggaagaagttcaaacgtgcacggaac
gctgccatcatcatccagtgtgcgttcagacgcacgcaagccaaaaaactactcaaagag
cggaagatcgaagctcgatcagcgcaacatctgaagaatctcaacacagggatggagaac
aagatcgtccagctgcagaggaaaatggacgaccagtctaaagaattaaaaactcagaac
gtgcagctgcagactgtgaacgtcagtatgggctcggaggtgaacaaactgcggaaggag
ctggagcaggtccggggtcagcgcggcgaaggaggtcagctgacgtccctgcaggacgag
ctggagaggctgaaggcggagctgcaggaggcgcacgctctcaggaagagactggaggag
gagcacggcagcgagaagatgagcctggaacagagggtggaggagctggagaaagaaaac
tctctgctgaagagtgagaaagaagaaatgaaccagaagatccttcagcagacgaagaac
tcccaagacatggacagcagtgtgtctcagacagaagtgtctcttcagaaagagctggac
gcagagaggcagagataccagaacctcctcaaagagatttccagagtggagcagaaatat
gaaaacctgaaggaggagctgtctctcaccaagttccagcccggccacatgaggaaccca
tccaaccagagcagcctggagtcggactcgaactacccgtcagtgtccacgtcggaggtc
ggcgacacagaggactctgtccagctggtggaggagatgggcgtggagaaagctgcgatg
gacatcagtctgttcatgaagctgcagaaacgagtgcgagagctggagcaggagaggaag
aggctgcagaccagtgtggacaagatggaggagctcgccaagcacaggagctctgagccg
aggagtcccacgtctgagctggaaattgcagatctggcctacaataacctgaagagagag
gagctggagtcagagaacaagaaactgaagaacaacctcaacgacctgaggaagtccatc
gctgagcgagcagctcaaaacaactcgtccaatgagctgcaggacggctacaacctgctg
ctgagtcagctcaaatcagccaatgaggagctggacgcccgcaaagaggagatgctcatc
ctcaggactcagatcgtcaaaaacgctcagctccaggagaagaaccaacaagttcagcaa
agtaataatgctccagaggctccagaggctccagaggttccagaggttactgaggttcca
gaggttactgaggttccagaggttactgaggttactgaggttcccgaggacaaggaagag
gccctcaaggcgtatcaaggactgactgagtctaaaaggctgttggaggctcagctgcag
actcagtccaggcagcacaaagacgaactggaggctcttcacactcagatcgagctgctg
aaagccgacatcgagaagaagcaggagatcctcaactacaccatgtccctgtcccctgag
gcccaggtggattacagcgtccagcaggagatcacacgactcaccaacgacaacctggac
ctcaaggagctggtggagaaactggagaagaacgagaggaaactgaagaagcagctgagg
atctacatgaagaaagtccaggagttggaggcgtctcaggctgcagctctgagcagcaga
tccagacctgaactgagtcgtcaggtgaccgtccagaggaaggagaaggactttgagggg
atgttggagtactacaaggaggatgaagctctgctggccaagactctgatcacagacatg
aagcccaacacggtgtcagcgaccgtcccctgcctgccggcgtacatcctcttcatgtgc
atccgccacgccgactacatcaacgacgacgagaaggtggagtctctgctcacctccacc
atcaactccgtcaagaaggtcctcaagaaaaacagcgatgactttgagacgacgtccttc
tggctggccaacaccagtcgtctgcttcactgcctgaagcagtacagcggtgacgaggtc
ttcatgacgcagaactcgcccaaacagaacgaacactgtctgaagaactttgacctggcg
gagtacagacaggtgctgagcgacctctccatccagatctaccagcagctcatcaaagtg
gcagaaggcatcatacagccaatgatcgtgtccgccatgttggagagcgagagcatcccc
agcctggcgggcgtgaagccgatgggctacaggaaccgttcgtccagcatggacactgac
ggccccagcagctacactctggaggccctaatcaggcagctgggacaatttcacagtatc
atgagggaccacggtctggaccccgagatcgtgggtcaggtggtccgacagctgttccac
tgcatcaacgctgtcacgctcaacaacctgctgctacgcaaagacgtctgctcctggagc
acgggcatgcagctcagatacaacaccagtcagttggaggagtggctcaggggaaataac
ttgtatcagagtaaagctgcagcgattctggagccggtcattcaggccgctcagctgctg
caggtgaagaagaagacgtctcaggacgccgaggccatctgctcgctctgcattgccctc
accacgcagcagattgtgaaagtcctgaacctctacacgccactgaacgagtttgaggaa
cgagtcacggtgtcgttcatcagagacattcagactcgtcttcaggtgagaaacgatcct
cctcagctcctgatcgacaccaaacacaccttccccgtcctcttcccgtacacgccctcc
gctctcagcctggagacgctgcacatccctgcctcgctcggcctcgacttcctcgtcaga
gtctga
DBGET
integrated database retrieval system
