Hippoglossus hippoglossus (Atlantic halibut): 117771295
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Entry
117771295 CDS
T07778
Name
(RefSeq) WD repeat-containing protein 7 isoform X1
KO
K24738
rabconnectin-3b
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
117771295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117771295
Membrane trafficking [BR:
hhip04131
]
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
117771295
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_WDR5
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
WD40
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
WDR55
Beta-prop_TEP1_2nd
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_ACSF4
Beta-prop_SCAP
Beta-prop_WDR41
Beta-prop_Aladin
WD40_MABP1-WDR62_2nd
Beta-prop_VPS8
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_DCAF12
Beta-prop_HPS5
Beta-prop_WDR19_1st
WDR72_alpha-sol
WDR90_beta-prop_4th
PEP5_VPS11_N
KNTC1_N
Beta-prop_Vps41
Tricorn_2nd
Beta-prop_WDR11_2nd
Motif
Other DBs
NCBI-GeneID:
117771295
NCBI-ProteinID:
XP_034457385
LinkDB
All DBs
Position
12:complement(19611497..19676136)
Genome browser
AA seq
1492 aa
AA seq
DB search
MSGNSLVLPIVLWGRTAPTHCISSLLVMDDFSTIITGCHDGQICLWDMTPELEICPRAML
FGHTASITCLSKASTCSDKQYIVSASENGEMCLWDVNDGRCIEFTKLACAHTGIQFYQFT
IGTQREGRLLCNGHYPEILVVDATSLEVLYSLVSKISPDWISSMSIIRSHRTQEDTVVAV
SVTGILKVWIITAEVSRMQDLDPVFEEESKPIYCQGCQSISFCTFTQSSLLVVCSKYWRV
FDAGDYSLLCSVPSDSDQAWTGGEFIAADKVIIWTEDGCSYIYKLPASCLPASEHFRSDV
GKTKEGSIPPLVYSIASRSDKQLLICPPVTRFFFGRREPFHKLLIQGDSAGRLSMWSIPE
TSPLQPLSTAAELQVSSTVSLQEAFDKLTPVSAGIIDQLSVLPGKEEPIKVTASVYIPSQ
GRMVCGREDGSIILVPATQTAIVQLLQGEHMLRRGWPPHRTLRGHRNKVTCVLYPYQISP
RYDQRSLVSGGVDFSVIVWDIFTGEMKHIFCVHGGEITQLIIPPENCSTRVQHCVCSVAS
DHSVGLLSLRERKCIMLASRHLFPIQVIKWRPADDYLVVGCSDGSVYVWQMDTGALDRCV
MGITAVEILNACDELAPATVDALSHSAVNLKQAMTRRSLAALKNMAQHKLQTLATNLLAA
DNADKGNLPKYSHNALVVQAMKTNLTDPDMHVLFFDVEAVIIQLLTEEAQRPSPTLVSPE
TLQKSQAGADKGGSFLANKIFKQVKETMKETIKEHLLDEDEEEEEEMRRREEKSKSLSLL
EYNLTMDTAKLFMSCLHAWGLNEQLDGICLERLGMLRPHCPISFGLISRGGHMSLMLPTF
KESLLYQLSLATGRKLTLSDIVGKGTYGVSRAVTTQHLLSIISLANTLMSMTNATFVGEH
MKKAPARPPRPGGTPESPRRTPAVPPQPSCPALQAQIKQAAVAAAANTGTAGAPGAPGGR
PHGAPGSPSPGPDSHNIPSVNEGWSQLAAMHCVMLPDLLGLDKFRPPLLEMLARRWQDRC
LEVREAAQALLLAELRRIGQSGRKDTIDLWAPYLPQYVDTVSSPGSTTEPSSPAPPPPEP
QPVETMAPEEQMDVTDDDITAGCLSNLPPNAKKISNSYEERRKQATAIVLLGVIGAEFGA
EIEPPKGSVRARTGGQAPEGFGLTSGGSSNYSLARHTCKALTFLLLQPPSPKLPAHSTIR
RTAIDLIGRGFTVWEPYMDVSAVLMGLLELCADAEKQLANITMGLPLNQPADSARSSRHA
LSLIATARPPAFITTIAREVHRYNAAQANSQSQQNVHTTTLARAKTEILRVIDILIEKMP
GDVVDLLVEVMDIIMYCIEGSLVKKKGLQECFPAICKFYMVGYCDRSHRIAVGARQGSVA
LYDVRTGKCQNIHGHKGPITSVSFAPDGRYLATYSNTDSHISFWQMNTSLLGSIGMLNSA
PQLRCIKTYQVPPVQPASPGSQNHLKLARLIWTSNRNVILMAHDGKEHRFMV
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaacagcctggttctacccatagtgctctggggccgcacggcgcccacccac
tgcatcagcagcctgctggtgatggatgacttcagcaccatcatcaccggctgccatgac
ggacagatctgcctgtgggacatgacacctgagctggagatttgtcccagagccatgttg
tttggacatacggcttctatcacctgtctttctaaagccagcacgtgcagtgacaagcag
tatattgtcagtgcttcagagaatggggagatgtgtttatgggatgtgaacgatggacgc
tgtattgagttcactaagctggcctgcgctcacactggcatacaattctatcagttcacc
atcggcacgcaaagggagggacgtctgctttgcaacggccattacccagaaatccttgtg
gtggacgccaccagcctggaggtcctgtactcactggtgtctaagatctcccccgactgg
atcagctccatgagcatcatccgatctcaccgcacacaagaggacacagtggtggcggtg
tcagtcactgggattctgaaggtctggatcatcacagctgaggtcagcaggatgcaggac
ctggacccggtgtttgaagaagaatctaaacccatctactgtcagggctgtcagagtatt
tccttctgcaccttcacgcagagcagcctgctggtcgtctgctccaagtactggagggtg
tttgatgcaggcgactactcgctgctctgctcggtgcccagtgacagcgaccaggcctgg
accgggggagaattcatcgctgcagacaaagtcatcatctggaccgaagacggctgcagc
tacatctacaagctgcccgccagttgtctgcctgcgagcgaacacttccgcagtgatgtt
ggtaaaactaaagaaggctccatccctcctctggtctacagcatcgccagccgctccgac
aaacagcttttgatctgtcctcccgtgactcggttcttcttcggccggcgggagcccttc
cacaagctgctgatccagggggactcggccggcaggctgtccatgtggagcatcccggag
acctcgcccctgcagccgctgtccaccgccgctgagctgcaggtgtcgtccaccgtcagt
ctccaggaggcgtttgataagttgacccctgtgtctgccgggatcatcgaccagctcagt
gtcctgcccggcaaagaagaacccatcaaggtgacggcgagcgtatacatcccctctcag
ggccgcatggtgtgcggcagagaagacggcagcatcatcctggttcctgccactcagacc
gcgatcgttcagctgttgcagggggagcacatgctccgcagaggctggccgccccatcgc
accctgcgaggtcaccggaacaaggtgacgtgcgtcctgtatccgtaccagatctccccc
cgctacgaccagcgctctctggtctccggaggcgtggacttctctgtcatcgtctgggac
attttcaccggggagatgaaacacatcttctgtgtccacgggggagaaatcacgcagctc
atcatccctcctgaaaactgcagcacccgcgtgcagcactgcgtctgctcggtggccagc
gaccactccgtcggcctgctgagtctcagggagaggaagtgcatcatgctggcgtcgcga
cacctcttccccatacaggtcatcaagtggcgcccggcagacgactacctggtggtggga
tgctccgacggctccgtctacgtctggcagatggacacaggagccttggaccggtgtgtg
atgggaataacggcggtggagatcctgaacgcctgtgacgagctggcgccggccaccgtg
gacgctctgagccactcggcggtgaacctgaagcaggcgatgactcgccgcagcctggca
gcgctgaagaacatggcccagcacaagctgcagacgctcgccaccaacctgctggctgca
gacaacgccgacaagggcaacctgccgaagtactcccataatgccctggtggtccaggcg
atgaagaccaacctgacggaccctgacatgcacgtgctgttcttcgacgtggaggcggtg
atcatccagctgctgacggaggaagcccagagaccgagccccacgctggtgtctccggag
acgctgcagaagagccaggccggggccgacaaaggggggtccttcctcgccaacaagatc
ttcaaacaggtgaaggagacgatgaaggagaccataaaggagcacctgctggacgaagac
gaggaggaggaggaggagatgaggcggcgcgaggagaagtccaagtctctgagtctgctg
gagtacaacctgaccatggacacggccaagctcttcatgtcctgccttcacgcctggggc
ctgaacgagcagctggacggcatctgtctggagcggctgggcatgctccgaccgcactgc
cccatctccttcggcctgatctccagaggaggtcacatgtccctcatgctgcccaccttc
aaggagtctttgctgtatcagttgtccctggcgacgggtcggaagctgactctgtccgac
atcgtggggaaggggacgtacggcgtctccagggccgtcaccacgcagcacctcctgtcc
atcatttctctggccaacactctgatgagcatgaccaacgccaccttcgtcggcgagcac
atgaagaaagcaccggccaggcctcctagaccaggaggaaccccggagtctcctcgcagg
acgccggccgtccccccccagccctcctgcccggcgctacaggcccagatcaaacaagct
gctgtagctgccgcagccaacaccggcactgctggggctccgggggcccctgggggccgt
ccccatggggcccctggctcccccagccccggccctgactctcataacatcccctcagtc
aacgaagggtggagtcagctggcagccatgcactgtgtgatgctccctgacctcctcggc
ctggacaagttcagacctcctctgctggagatgttggcgaggagatggcaggaccgttgt
ctggaggtacgagaagcagcacaagctctcctattggctgagttgaggaggatcggccaa
tcaggacgcaaggacaccatcgacctgtgggcgccgtacctccctcagtacgtggacacc
gtcagctcccctggatcgaccacggagccctcctctccggccccgccccctcctgagcct
cagccagtagaaaccatggctcccgaggagcaaatggacgtcactgatgatgacatcaca
gcaggttgtctctccaaccttccaccaaatgccaagaagatctccaactcgtatgaggag
cgccgtaagcaggccaccgccatcgtgctgctcggggtcatcggggccgagtttggcgcc
gagatcgagcctcccaagggttcggtgcgggctcggaccggcggacaggcgcccgagggc
ttcggcctgacgagcggaggatcgtccaactactcgctggccagacacacttgtaaggct
ctgaccttcctgctgctgcagccccccagccccaagctgcccgcccacagcaccatccgc
cgcaccgccatcgacctgattggccgaggcttcactgtgtgggagccgtacatggacgtg
tcagcggtgctcatgggacttctggagctctgtgccgacgcagagaagcagctggccaac
atcacgatgggtttgcctctcaaccagccggcggattctgctcgctcttctcgccacgcc
ctctctctcatcgccacggcccgtccgcccgccttcatcaccactatagcacgagaggtc
catcggtacaacgcagcgcaggcgaactctcagtcgcagcagaacgttcacaccaccact
ctggcccgagccaagaccgagatactgcgagtcatcgacatcctgatagagaagatgccg
ggagacgtcgtggatctgctggtcgaggtgatggacatcatcatgtactgtatcgaaggt
tctctggtgaagaagaaaggtctgcaggagtgtttccctgcgatatgcaagttctacatg
gtcggttactgcgaccgcagccaccgcatcgctgtgggagctcgacagggctcagtggcg
ctctacgatgttcgtacgggaaaatgtcagaacatccacggtcataagggtccgatcaca
tcggtgtcgttcgcccctgacggccgttacctagcaacctactctaacaccgacagccac
atctccttctggcagatgaacaccagtctgctggggagcatcgggatgctgaactcggcc
cctcagctccgctgcattaagacctaccaggttcctccggtgcagccggcgtccccgggc
tcccagaaccacctgaagctcgcccgcctcatctggacgtccaaccgcaacgtgatcctg
atggcccatgacgggaaggagcaccgcttcatggtctga
DBGET
integrated database retrieval system
