KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117771301
Entry
117771301         CDS       T07778                                 
Symbol
helq
Name
(RefSeq) helicase POLQ-like
  KO
K19178  POLQ-like helicase [EC:5.6.2.4]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hhip03400]
    117771301 (helq)
Enzymes [BR:hhip01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     117771301 (helq)
DNA repair and recombination proteins [BR:hhip03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    117771301 (helq)
SSDB
Motif
Pfam: POLQ_helical HTH_61 DEAD Helicase_C ResIII HHH_5 DNA_pol_lambd_f DUF4332 DGKD_4H
Other DBs
NCBI-GeneID: 117771301
NCBI-ProteinID: XP_034457397
LinkDB
Position
12:20143813..20150116
AA seq 1035 aa
MNCGDRDIKIKRFSGRKRSRDGAQSHMTPARKRGGAGGGGEDTCPTDRRVTSIMAQPAEF
CSDTEDLFGDYDSLLDDSSLLAKLDDAEQDERRRELQIVAVDQQDLAALPPPEDRVHNRS
CQDVLTDSILDVLGDEPFEDLPVSQMQFEEQIGEGVKRNKLQDGDNTSTPSRNAGDSGHR
RTSEAGTDRHTDDKTRRRSRARRSVTDQLKRTMLCNAAAPSNISRSVGLKEAVVSEEISV
AMQAMETVSTETTDLGPFFGLPSKVKDLMYKLRGIKSLYDWQETCLNLDCVQQRKNLIYS
LPTSGGKTLVAEILILRELLCRKKDCLFILPYISLVQEKVRGLASFGLELDFMVEEYAGS
KGRFPPVKRRNQTSLYISTIEKGHGLVNSLIESGRLDNVGLVVVDELHMLGDGSRGAVIE
MTLAKVLYMSNKTQIIGMSATLGNIRDLQMFLKAENYSNDFRPVQLKEYVKLNDTIYEVD
PKEEECFRFSRLLNYKYSSSMQKIDPDHIIALVTEVIPTHSCLVFCPTKKNCENVAGMIC
KYLKEEFLQHRREEKVVLLRELKDSGDGSVCPVLRRTVPYGVAYHHSGLTTEERKLVEEA
YSNGVLCLLACTSTLAAGINLPARRVILRSPYVAADFLKRSQYKQMVGRAGRAGIDTVGE
SILVLQDKDRTMAQTLVCAPMENCRSHLLHDDGKGILSLILSLIGLNITTSMEQVRDFLQ
GTLLYVQREQLCVERSLWDVVQQCVDVLQEKDLIAVMSHTQTLQVTKLGKATYKGSVDLS
CSGVLYQDLSRGLEGLLLNSYLHLLYLVTPYDMVAQCKPDWMIFFRQFTRLSAAEQKMSA
AVGVPESFVARKAAGQTVKNNVDLAVARRMYLALVLFSLLRETNLWSVADRFQLSRGFVQ
TLLSSSSAFCSCVLHFTEELEELWPFKALLTELTRRLSYCVKAELIPLMEVVGVMESRAK
QLYNAGYKTLTHLANADPAILSKTIENLYKKQANQIVASAKMLLNEKAAALQEEVDDLLM
APLDLPADLSTEQLL
NT seq 3108 nt   +upstreamnt  +downstreamnt
atgaactgtggagacagagacataaaaataaaacgattttccgggaggaagaggtcgaga
gatggagctcagagtcacatgacacctgccaggaagagaggaggagcaggaggaggagga
gaagacacatgtcccactgacaggagggtcaccagcatcatggctcaacctgctgagttc
tgcagtgacactgaggatttattcggggactacgacagtctcctggacgacagctcgctc
ctggcgaagctcgacgatgcagaacaagacgagaggcggcgtgagctccagatcgtggct
gtggatcagcaggacctcgccgctctgccaccgcccgaagaccgcgtccacaatcgctcc
tgccaagatgtcctcacagactccatcttggacgtcctgggagacgaacccttcgaggac
ttacctgtcagccagatgcagtttgaagaacagatcggtgaaggtgtgaagaggaacaag
ctgcaggacggagataacacttcaacaccttctagaaacgcaggagacagtggacacagg
aggacgtctgaggccgggacagacagacacacagacgataaaaccaggagacggagccga
gcgaggaggagtgtgacggatcagctgaagaggacgatgctctgtaacgctgcagctcca
tcgaacatctctcgctctgtcgggttgaaggaagcggtggtttccgaggagatcagcgtc
gccatgcaggccatggagacggtttccacggagacgaccgacctcggccccttctttgga
ctcccctccaaagtaaaagatctgatgtacaaactgagaggaatcaagagcttatatgat
tggcaggagacgtgtctgaacctcgactgtgttcagcagcggaagaatctgatctactct
cttccaaccagcggaggaaagactctggtggcagagatcctcatcctccgagagctgctg
tgcaggaagaaggactgtctgttcatcttaccgtacatctcactggtgcaggagaaggtc
cgcgggttggcgagcttcggcctggagctggacttcatggtggaggagtacgctggcagt
aaggggaggtttcctccagtgaagcggagaaaccagacgtcactttacatctcgacgata
gagaaaggccacggcctcgtgaactctctgatcgaatctggccggctggataacgtcggc
ctggtggtggttgatgagcttcacatgttgggcgacggaagcagaggagctgtcattgaa
atgactctggctaaagttctgtacatgagcaataagactcagattattggcatgagcgcc
accttgggaaacatcagggacctgcagatgtttctaaaggctgaaaattactcaaatgac
ttcagacctgttcagctgaaagaatatgtcaaactgaacgacacgatctatgaagtggac
ccgaaggaggaggagtgtttcaggttctcacgtcttctcaactataagtattccagctcg
atgcagaagatcgacccggaccacatcatcgctctggtgactgaagtcatccccacgcac
tcgtgtctggtcttctgtcccaccaagaagaactgtgagaacgtcgcagggatgatctgt
aaatatctgaaagaggagttcctgcagcacaggcgggaggagaaggtcgtcctcctcaga
gagctgaaggacagcggtgacggctcggtgtgtccggtgctcaggaggacggtgccttac
ggcgtggcctaccaccacagcggactgaccacagaggagaggaagctggtggaggaggcc
tactccaacggcgtgctctgtctcctcgcctgtacctccaccctcgctgctgggatcaac
ctaccggctcgcagagtgattctccgctcgccgtacgtggccgcggacttcctgaagagg
agtcagtacaaacagatggtgggacgagccgggcgagcgggcatcgacacagtgggagag
agtatcctcgtcctgcaggacaaagacaggaccatggctcaaacactggtctgcgctccg
atggagaactgtcgcagtcacctgctgcacgacgatggaaaaggaatcctgagtctcatc
ctgtcgctcatcggactcaatatcaccacctcgatggagcaggtcagggacttcctgcag
gggacgctgttgtacgttcagcgggagcagctgtgtgtggagcggagtctgtgggacgtg
gtgcagcagtgtgtcgacgtcctgcaggagaaggatctcatcgccgtgatgtcacacact
cagacgctgcaggtcaccaagctcggaaaagctacgtataaaggctccgtggatctgagc
tgcagtggcgtcctgtaccaggacctgtcccgcggcctggagggtctgctgctcaacagt
tacctgcacctgctctacctggtgacgccgtacgacatggtcgcccagtgcaaacccgac
tggatgattttcttcagacagttcacgcgtctgtcagcggccgagcagaagatgtctgca
gccgtcggcgtgccggagagttttgtagcgagaaaagctgccggacagacggtgaaaaac
aatgtggacttggcggtggcgagacgcatgtatctggctctggtgctgttttctctcctg
agggaaacaaacctgtggagtgtggctgaccggttccagctgagccgaggcttcgttcag
actctgctcagctcctcgtcggcgttctgctcctgcgtcctgcacttcacggaggagctg
gaggagttgtggccgttcaaagcgttgctgacggagctgacgcggaggctgagttactgt
gtgaaggcggagcttatccctctgatggaggtggttggagtcatggagtcacgagcgaag
cagctgtacaacgccggctacaagacactgactcacctggcgaacgccgaccccgccatt
ctgtccaagacgatagaaaacctgtacaagaaacaggccaatcagatcgtggcctcggct
aaaatgctgctgaatgaaaaggcggcggctcttcaggaggaagtggacgacctgctgatg
gcgccgttagatctgcctgctgatttatcaacagagcaactcctctga

DBGET integrated database retrieval system