KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117771306
Entry
117771306         CDS       T07778                                 
Symbol
wdr36
Name
(RefSeq) WD repeat-containing protein 36
  KO
K14554  U3 small nucleolar RNA-associated protein 21
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    117771306 (wdr36)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hhip03009]
    117771306 (wdr36)
Ribosome biogenesis [BR:hhip03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    117771306 (wdr36)
SSDB
Motif
Pfam: Utp21 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 WDR55 WD40 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I Beta-prop_EML WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st NBCH_WD40 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_HPS5 Beta-prop_RIG_2nd WD40_RFWD3
Other DBs
NCBI-GeneID: 117771306
NCBI-ProteinID: XP_034457404
LinkDB
Position
12:complement(19908892..19917231)
AA seq 893 aa
MSGGGTLAGGGSSLFSGFRVLGLYSNHVPHALRYHHKHREFYLVTAVGKCLHTYNVNRLG
IVAVGDSLSDDITCLAADRMLVFAASGKLVSAFARNKEVVMRYHGHKQEVRLLLPLGDNL
ISADSGGDVIVWDVQAGDVYLRLQFDPKTFDVSAMMHPSTYLNKVLLGSSQGALQLWNIK
SSKLLFTFPGWSAGVTVLQQSPAVDVVGVGTATGRIIIHNIKFDETMMSFTQDWGPITSL
SFRTDGPPILASGSPQGHIALWDLERRQLVTQHRNAHSTAIAAATFLHGEPLLVTNGADN
AIKVWIFDREGGGARLLRSRQGHSAPPTTIYHHGIDGKNILSSGQDGTLQSFSTVHERFN
KNLGHGSINKKKEQKKKKGLSYEELRLPAITAFSSAAARQSDWDGIVACHRGRRAATTWN
YQRCTMGSYHLQPPCPRRDAVATAVDITSCGNFAVIGSSCGRVDIYNLQSGLHRGCYGDN
EKAHSGAVRGVATDALNQLTLTSGSDWLLRFWRFKTRKQEQQLKLNAAPASMMLHRDSGM
LALALDDFTLQVVDIETRRVVRKFVGHHSNINDMTFSPDGRWLVTVAMDCTIRTWDLPSG
SLVDCFLVAMAPVGVSMSPTGDFLATAHVDSLGVYLWTNKSLCGPVGLRPLPADYQPVVE
MLPGVTVDESEQEVPSEEVDDAYKSADQLGLELVTLSLLPESRWKSLLHLDVIKKRNKPV
APPVAPAAAPFFLPTVPGLTPRFTLPAATEQETQSKMLSRGLLSQKTEFSAALESAQESG
SFDRPVRLLKDCGPAAISVELTCLTTEGGGASSLLLAFVNMIDSMLANGRDFDLAHAYLA
LFLKLHLRTLSQDTVAMAALLRLSTHMEAGWAGLRSSFDQSLCLLSYTKSALL
NT seq 2682 nt   +upstreamnt  +downstreamnt
atgtcgggcggcgggactctcgcaggcggcggcagctctttgttctccggtttccgggtt
ctgggtctttactccaaccacgtgccgcacgcgctccgttaccatcacaagcaccgggag
ttctacctggtgaccgcggtcggtaaatgtctccacacgtacaacgtgaacagattgggg
atcgtggccgtcggtgacagcctgtcagatgacatcacatgtctggcagctgacaggatg
ttggtgttcgctgcttctggaaaactcgtcagtgctttcgcccgaaacaaagaggtggtg
atgcgttaccatggtcacaaacaggaagtgcgtctgctactgccgctgggcgataacctg
atctccgctgacagcggtggtgatgtaatagtgtgggatgtccaggccggggacgtctac
ctgcgcctgcagtttgacccaaagaccttcgacgtgtccgccatgatgcacccgagcacg
tacttgaacaaggtgctgctgggaagctcccagggtgcactgcagctgtggaacattaag
tccagtaagttgttgttcacatttcctggttggtcagcaggggtcactgttctgcagcag
agtcctgcggttgacgtggttggcgttggcacggcaacgggccgcatcatcattcacaac
attaagtttgacgagacaatgatgagtttcacacaagactggggaccaatcacctcgctc
tctttcagaacagacggtcctcccatcctggcgtccggtagtcctcagggccacattgca
ttatgggatctggaacgcagacagctggtcactcaacacagaaacgcccacagcacagcc
attgccgcggcaaccttcctgcatggagaaccgctattggtcactaacggggctgacaac
gccatcaaggtgtggatatttgatagggaggggggtggagccagactcctgcggagtcgc
caaggtcacagcgccccgcccaccaccatctatcaccatggcatcgatggaaaaaatatt
ctcagttcaggtcaggacgggacactgcagtctttctccaccgtccacgaacgtttcaac
aagaacctgggtcacggctcaatcaacaagaagaaagagcagaagaagaagaaggggctg
tcctacgaggagctgcgtcttcctgccatcactgcgttctcctctgctgctgcccgtcag
tctgactgggatggaattgtcgcctgtcatcgcggtcgccgagcagccacaacatggaac
taccagaggtgcaccatgggaagttatcatctgcagccaccctgccctcgcagggatgcg
gtggccacggccgtcgacatcacttcctgtggtaactttgctgtgattggctcatcgtgc
ggacgtgttgacatctacaaccttcagtcagggctgcatcgtggttgctatggggacaat
gagaaagctcacagtggtgcggtgcgaggtgtcgccacagacgccctgaaccagctgacc
ctcacctctggctctgattggctgctcaggttctggcgctttaagaccaggaaacaggaa
caacagctgaagctaaatgctgccccagctagcatgatgctacacagagacagcgggatg
ttagcattagcactggatgacttcacactgcaggtggttgacatagagaccagacgagtg
gtcaggaagtttgtgggacaccacagcaacatcaacgacatgaccttcagccctgatggt
cgctggctggtgaccgtggcgatggactgcaccattcgcacctgggatcttccctccggc
agccttgttgactgtttcctggttgccatggcgccagtgggtgtgtccatgtcaccgacc
ggagacttcctggcgacggcccatgttgacagtctgggcgtttacctctggaccaataaa
agcctgtgtgggcccgtggggctccgcccactcccggctgactaccaaccggttgtggag
atgcttcctggcgtcacagtggacgaatcagaacaggaagtaccatcagaggaggttgat
gatgcatacaagtcagctgatcagctggggctggagctcgtaacgctgtcgctgctgcca
gagtcccgatggaagagtctgcttcacctggacgtcatcaagaagaggaacaaacctgta
gcgccccctgtggctccagctgcagctcccttcttcctgccaacagtccccggactcacg
cctcgatttacgttgcccgcagcaacagaacaggaaacacagtcaaagatgctgagtcgt
ggtttgttgagtcaaaagaccgagttcagcgctgctctggaatcagctcaagaatctgga
tcattcgatcgcccggtgcggctcctgaaggattgtgggccggcggcgatctctgtcgag
ctcacctgtctgacaacggaggggggcggagccagcagcctcctgctcgccttcgtcaac
atgattgacagcatgttggccaatgggcgggacttcgatctggctcatgcctacctggcg
ctattcttaaagctccatctccgtaccttgtcacaggatactgttgccatggcagcattg
ctccgcctctccacccatatggaggcgggttgggcggggttacgttcctcatttgaccaa
tcactttgtctgctgtcgtacactaagagtgcactgctgtga

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