Hippoglossus hippoglossus (Atlantic halibut): 117771492
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Entry
117771492 CDS
T07778
Symbol
grin1a
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1a isoform X1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04020
Calcium signaling pathway
hhip04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
117771492 (grin1a)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
117771492 (grin1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hhip04040
]
117771492 (grin1a)
Ion channels [BR:
hhip04040
]
Ligand-gated channels
Glutamate (ionotropic)
117771492 (grin1a)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Ion_trans_2
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
117771492
NCBI-ProteinID:
XP_034457788
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Position
12:complement(16565358..16595870)
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AA seq
951 aa
AA seq
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MRLFLLAVLFWCSCARAGCEPKIVNIGAVLSQKRFEQVFKDAVTQANQVYGRDKFKLTAI
SVTHKPNAIQMALSVCEDLISSQVYAILVSHPPQSNDHLTPTPVSYTAGFYRIPVVGLTT
RMSIYSDKSIHLSFLRTVPPYSHQAHVWFDLMREFNWNHIILIVSDDHEGRAAQKRLETL
LEERETKNKKRNYENLDQLSYDNKRGPKAEKVLQFSQETNLTALLLEAKELEARVIILSA
SEEDAAAVYKAARFLNMTGSGYVWLVGEREMSGKALIEAPDGLIGLQLINGKNESAHIND
AVAVVAQSIQELFEKENITEPPRGCVGNTNIWKTGPLFKRVLMSSKYPEGLTGRVEFNDD
GDRKYAHYGILNYQKTRLVQVGIYNGTQVVMNNQRKIIWPGGETEKPQGFQMSTRLKIVT
IHQEPFVYVKPTMPDGTCHEEMTLNGVLIKKVICTGPNETIPGNTSGRPIVPQCCYGFCV
DLLIKLAMTMNFTYEVHLVADGKFGTQERVNNSNKKEWNGMMGELLGGLADMIVAPLTIN
NERAQYIEFSKPFKYQGLTILVKKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLL
DRFSPFGRFKVNSEEEEEDALTLSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFA
MIIVASYTANLAAFLVLDRPEERITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELS
TMYRHMEKHNYESAAEAIQAVRDNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGI
GMRKDSPWKQNVSLAILSSHENGFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLV
AGGIAAGIFLIFIEIAYKRHKDARRKQMQLAFAAVNVWRKNLQPSSSLETQDDRKSGRAE
PDPQKKASFRSISTNLASSIKRRRSSKDTQYPPTDITGQLNLSDPSVSTVV
NT seq
2856 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgtttctgctggcggtgctcttctggtgctcctgcgcgcgggccggctgcgag
ccgaagattgtgaacatcggggccgtgctgagccagaagaggttcgagcaggtcttcaaa
gatgccgtgacccaggccaaccaggtctacggccgggacaaattcaagctgaccgccatc
tccgtcacgcacaagcccaacgccatccagatggctctgtccgtctgcgaggacctcatc
tccagtcaggtctacgccatcctggtgagtcaccctccccagtccaatgaccacctcacg
ccaacgcctgtctcctacaccgcgggcttctaccgcatcccggtggtggggctcaccacc
cgcatgtccatctactcagacaagagcatccacctgtccttcctgcggacggtccctccc
tactcccaccaggcgcacgtgtggttcgacctgatgcgcgagttcaactggaaccacatc
atcctgatcgtgagcgacgaccacgaggggcgggcggctcaaaagaggctcgagaccctc
ctggaggagagggagaccaagaataaaaaaaggaactatgaaaacctcgaccaactgtcc
tatgacaacaagcgaggacctaaggcagagaaagtcctccagttcagccaggagactaac
ttaactgccctgctgctggaggccaaagagctggaggcccgagtcatcattctgtccgcc
agcgaggaagacgctgctgcggtgtacaaggcggcccgcttcctcaacatgacgggctct
ggctacgtgtggctggtgggcgagcgggagatgtcgggtaaagccctgatcgaggcgcca
gacggtctgatcggcctccagctcatcaacggcaagaatgagtcggcccacatcaatgac
gcggtggctgtggtggctcagtccatccaggagctgtttgagaaggaaaacatcacagag
cctccgagaggatgcgtgggcaacaccaacatctggaagacggggcccctttttaaacgg
gttctgatgtcatccaaatacccagagggcctcacgggacgcgtggagttcaacgacgac
ggcgacaggaagtacgcgcactacggtatcctcaactaccagaagactcgactcgttcaa
gtcggcatctacaacggaacgcaggtggtgatgaacaatcagcggaagatcatctggccc
ggaggagagacggagaaaccgcagggcttccagatgtccactcgattaaagatcgtgacg
atacaccaggagccatttgtgtacgtgaagcccactatgccggacggaacgtgccacgag
gagatgacactgaatggagtcttaattaaaaaggttatctgcactgggcccaatgagacc
atcccaggtaacacttcaggtcgcccaatcgtaccccagtgctgttacggattctgcgtt
gacctcctgatcaagctagctatgacgatgaacttcacctatgaggtgcatctggtggct
gatgggaagttcggaactcaggagagggtgaacaacagtaacaagaaagagtggaacggc
atgatgggagagctcctggggggcctggccgacatgatcgtggccccgctgactataaac
aacgagagagcccagtacatcgagttctccaaaccctttaaatatcaaggtctcacgatc
ctcgttaaaaaggaaattcctcgcagtacactggactcgttcatgcagccgttccaaagc
acgctgtggctgctggtgggtctatcggtgcatgtggtggcggtgatgctttacctacta
gaccggttcagcccgtttggaagatttaaagtaaacagtgaagaagaagaagaggacgcc
ctcaccttgtcatctgccatgtggttctcctggggagtgttgctgaactctggaatagga
gaaggtgccccgcgcagcttctcagcgagaatcctgggtatggtgtgggccggctttgct
atgatcattgtggcctcttatactgccaatctggctgccttcctggtgttggaccggcct
gaggagcgcatcaccggcatcaatgacccaaggctgagaaacccatcggacaaattcatc
tacgccacggtgaagcagagctccgtggacatctacttccggcggcaggtggagcttagc
accatgtaccgccacatggagaagcacaactatgagagtgccgccgaagccatccaggcc
gtgcgtgacaacaagctgcatgctttcatctgggactctgcggtgctggagtttgaagcc
tcgcagaagtgcgacctggtgaccacgggagagctgtttttccgctcgggctttggcata
ggcatgcgcaaggacagcccctggaaacagaatgtgtccctggccattctcagttcccat
gagaacggcttcatggaagacctagataaaacctgggtgagataccaggagtgtgactca
aggagcaatgccccagccacactcacctttgaaaacatggcaggtgtcttcatgctggtg
gctggaggcatagccgccgggatcttcctcattttcatcgaaattgcctacaaacggcat
aaagacgcccgcaggaagcagatgcagctggcctttgcggccgtcaatgtttggaggaag
aacctgcagccctcttcctctctagagactcaggatgataggaaaagtggtagagcagag
cccgacccccaaaagaaagcctcttttaggtccatcagtaccaacctggcctccagcatc
aagagacgtaggtcctccaaagacacgcagtacccacccactgacatcacgggccaactc
aacttgtcggacccgtctgtcagcactgtggtgtag
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