Hippoglossus hippoglossus (Atlantic halibut): 117771649
Help
Entry
117771649 CDS
T07778
Symbol
arhgef28a
Name
(RefSeq) rho guanine nucleotide exchange factor 28 isoform X1
KO
K21072
A-kinase anchor protein 28
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117771649 (arhgef28a)
Membrane trafficking [BR:
hhip04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117771649 (arhgef28a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH_16
C1_1
PH
Ank_2
SOS1_NGEF_PH
PH_13
PHD
C1_2
Prok-RING_1
PHD_4
DUF7588
Motif
Other DBs
NCBI-GeneID:
117771649
NCBI-ProteinID:
XP_034458144
LinkDB
All DBs
Position
12:complement(4270054..4326442)
Genome browser
AA seq
1780 aa
AA seq
DB search
MEVNRREVPLYGQVEANVKLPASAPEDAEFYAVVQGSRLTHVTAAKRGDDGMCLCFTVPG
HDLVEVVSVTSYFYAEDRVRPCEGKTSLEYVRDVAQDAAEYLSAHREQLGTQSYLEVLKR
FPLLPEEELSLGGLDRDEGDAEEVQLGESRGEEAGLRQLDEKIAQAMANMDYPQQWRNTD
SQQREVAEIQPKETLLHLAVRLGLVHLSRFLIHQPRGQRALTSPNQEGDTPLQLAQRDGQ
HAVFRVLAASAGPGVGPAAGVCSVWSDSSRTLRFCPGTNSLTLTVRQAPGSCPQDDIMVL
RDRQEDHSIVRLISVLRADSEEEERSKDEVLSVDEGISKEPRVEQHVLVDNVFEEQLVLS
LDDDDDDVKEYPSSLSEYDHPVKSAGVESHFTQHATDPLLSMFDIDQKTGHQTQPDDVDL
KYSVSGVTSDSTGTDSGLWDAVDTQDLLLTTDTPPPCPENLCPQLHSSPADQALAKLSCP
TSFEPTDERDTPPMDACDLSPSLVALEVDSEEDSADMKSPLSPLSSDVEKNEDKGDAFCP
SADLTCTRSKSASAACEPPTKELNDQGIRLRSYSYSAPKISLRPARFARDNPTSDISPDA
VLHSVSHSRSLLQALSLSKSLSLLHPGKQRASSISEQSHEKREFRFRSRAQSADDEGSME
LAESLQHLTLSEFLKEIEEEELDKYSIPTKAESEKYKVIRTFSFLKSRMSSTRSKTKGKG
KDREAKDRQLNGHRFATGSCLGPTICVVCDKPASGKDLLHCSSCTAIVHKGCKESLPPCL
KKQDKYAVTTVKNRTASLPQNFTVRDTPPQCVIPISTSLPVMTGKEKKDTVTQSSCLSGS
FPNSDSRLSESSETECDAVKGLSHSEELLPTPTSSTSTDSSFGEDSVDTCIQGDISADTA
DYEAESWSLTVENEFCKKLEKRAVKRQDVIYELMQTELHHLQTLHIMAEVFRRGMREEVQ
LDSEAVKRVFPCLDQLLLFHHGLFAAMKERRHSSAEPQGHRNYLIQRIGDVLLQQFSEES
GENMKQVYGEFCSRHNEAVNFFKELQQHNKRFQNFIKQQGNNSLVRRREIPECILLVTQR
ITKYPVLLERILQYTQEDTEECADLSRALAQIREVIAAVNLRVSEYEWHQRLQEVWNRME
NRSSTKLKSGHAFRKQDMMGPGQILKHQGLLLWKTATGRLKDVLALLLTDTLIFLQEKDQ
KYTFATVDQKPPVIALQKLIVREVANEERGMFLISASSAGPEMYEVHTSSKEERNAWMRL
IREAVESCPEEEEEYASESEEEKRAAEARVQKIHKLQESLMSQDQQICSSLEEKLQIYTE
LSALSGRTDASAVEPRLLVQPHSEDVPQAAELLVAALQEAENLKATLSAKARSPSSHGPD
SDTDSVFAVSPAPHVQLPSDSSEPSPATPEAGEGSWTQAVVPQSPESDDIDLKVHKRKVS
QSVQSLTQLLYSLQAAVTIQDSCYEVQRLLLQETGRPSPRAQRPHLPSARGNTLQEQEKQ
RNLEKQKEEVVAAQRLQDRLRQEKERWDRACQARESQQGEQESRLEERERQCHLEVERLR
REREELDEQQEEYQQSLERLREGQRSVERERERLEGQQKLLQTWTHGRQRSLPTVIPHMV
IPLDVQQDSAPSQSRDLGGNGSMFVNEAAFASTSINNRHVHHKKNDPSKHNCLNTLLARS
NSRQPPIAKTPHSPHSDSQGWMMGTGYLYSPAGKLGLQHTPTDHSSHSYIGETWLARASG
ADLYPELPHPRDPQLDLSALVSLETDSGGEEGREETIVYL
NT seq
5343 nt
NT seq
+upstream
nt +downstream
nt
atggaggtgaacagaagagaggtgcctctatatggacaagtggaggccaatgtgaagtta
ccagccagcgctcctgaagacgcagagttttatgctgttgttcaaggttccagactaaca
catgtgacggcagcgaaaagaggagatgatgggatgtgcctttgcttcaccgttcctggt
cacgaccttgtggaagttgtctctgtcacatcctacttttatgcagaggacagagtcagg
ccatgcgagggtaaaacatctcttgaatacgtcagggacgttgcccaggacgcagcagag
tacctgagtgcacacagggagcagctcggcacccagagctacctggaggtcctgaagagg
tttcctttgctgcctgaagaggagctctcactcggagggttagaccgcgatgagggtgat
gcagaggaggtgcagctcggagaaagtagaggcgaagaagctggtctcaggcagctggat
gagaagatcgcacaggcgatggccaacatggattaccctcagcagtggagaaacactgac
agtcagcaaagggaagttgctgagattcagcccaaagaaaccctgcttcacctggcggtg
cgtctgggtttggtccatctctcccgtttcttaattcaccaaccgagaggtcaaagggca
ttgacctcgcccaatcaggagggagacactcctctgcagctggctcagagggacggacaa
catgctgtgttcagggtgctggcagcctccgcgggtcccggagtcggccccgccgcaggt
gtgtgcagcgtgtggtccgacagctcccgcacgctgaggttctgtcccgggacaaactcc
ctgaccctgactgtgcgacaggcccccggcagctgccctcaggacgacatcatggtgctg
cgagacagacaggaagaccacagcattgtcagactgatcagtgtgctcagagctgatagt
gaggaagaggagagaagtaaagatgaagtcctttctgttgatgaaggcattagcaaggag
ccgcgagtggaacagcacgtgctggtggacaacgtttttgaagagcagcttgttctgtct
ctggacgacgatgacgatgatgtaaaagagtacccatcgtcattatctgaatatgatcat
cctgtgaagtccgctggagtcgagagccattttacccagcatgccacagaccctctgctc
tccatgttcgacatcgatcagaaaaccggacatcagacgcagccggatgatgtcgacctc
aagtacagcgtcagcggagtgacgagcgacagcacagggacggacagcgggttatgggac
gccgtggacacgcaggatctcctgctcaccactgacactcctccgccctgtccagaaaac
ctctgcccccaactccacagctcacctgctgaccaggccctcgccaagctgagctgtccc
acctcctttgagccgaccgacgagagggacactccgcccatggacgcctgcgacctcagt
cccagtctagtggctctggaggtggacagcgaggaggacagcgccgacatgaagtctccg
ctttcaccgctctcatcagacgtggagaagaacgaagacaaaggagacgccttttgtccc
tccgctgacctcacttgcactcgcagcaagtctgcctctgcggcatgcgaaccccccaca
aaagaattgaatgaccaggggattcgactgcgttcctattcctactccgcaccaaaaatc
agtttgcggcctgctcgttttgcccgggacaatcccacttcggacatcagccctgatgcc
gtgctccacagtgtcagccacagccgatctctccttcaggccctctctctgtctaaatct
ctgtctctgctccaccctggtaagcaaagagcctccagtatttcagagcagtcacatgag
aaaagggagtttaggttccgtagtcgtgcccagtctgcggatgatgagggcagcatggag
ctggcagagtcgctccaacacctcacgctgtctgagttcctcaaagaaattgaagaggag
gagctggataagtacagcatcccaaccaaagcggagtcagagaagtacaaagtcatccgc
accttcagtttcctcaagagcaggatgtccagcacacgcagcaagaccaaggggaagggg
aaggacagagaggccaaggacaggcagctgaatggacatcggtttgcgacagggtcctgt
ttaggccccaccatctgtgtggtgtgtgacaaaccagcgtctggcaaggacctgctgcat
tgttccagttgcactgccatcgtccataagggctgtaaggaatctttgccgccatgtttg
aagaaacaggataaatatgctgttaccacggtgaagaacaggacagcatccctcccacag
aatttcacagtgagagacacacctccgcagtgtgtgatccccatctctacctctcttcct
gtcatgacggggaaggagaagaaggacacggtgacccagtcaagctgtttgtctggaagt
ttccccaacagtgacagtcggctcagtgagagttcagagacagagtgtgacgcagtgaag
gggctcagtcattcagaggagctgctgccgacgccgacgtcctccacctccacggactca
tccttcggagaagacagtgtggacacgtgtatccaaggtgacatctcggcggatactgcg
gattacgaggcagagtcgtggagtctgacggtggagaacgagttctgcaagaagctcgag
aaacgagcggtcaagaggcaggatgtcatctatgagctgatgcagactgagctccaccac
ctgcagacgctccacatcatggccgaggttttccggcgaggcatgagggaggaggtgcag
ctcgactcagaagcggtgaagcgggtcttcccctgtctggaccagctgctcctcttccac
cacggcctcttcgccgccatgaaggagcggcgacacagctcggccgagccgcagggacac
aggaactacctcatccagcgaataggagacgtcctgctccaacagttttcagaggagagt
ggcgagaacatgaagcaggtatatggagaattctgcagtcgtcacaacgaagccgtcaac
tttttcaaagaactacagcagcacaacaaaagatttcagaacttcattaagcaacaaggt
aataattccttggtgcgacggagagagatcccagaatgcatcttgctcgtaacccaaagg
attacaaagtacccagtgctgctggagaggatcctacaatacactcaagaggacacagag
gaatgtgccgacctttcgagagccctggctcagatccgggaggtgatagcagccgtgaac
ttgagggtcagcgagtatgagtggcatcagagattacaggaagtgtggaaccgcatggag
aaccgcagctcgaccaagctgaagagcggacatgccttcaggaagcaggacatgatgggg
ccgggacaaattctcaagcaccagggcctgctcctgtggaagactgccaccgggcgactg
aaagacgtcctggcgctccttctcacagacacgctcatcttcctgcaggaaaaagaccag
aagtacacgtttgccactgtggaccagaagcctccagtcatcgcactgcagaagttaata
gtgcgagaagtagcaaatgaagagagggggatgtttctgatcagcgcgtcatctgcgggg
ccagaaatgtacgaggtccacacgtcgtccaaagaggagcggaacgcttggatgaggctc
attagagaggctgtggagagctgtccggaagaagaggaggagtacgcgagtgaatctgag
gaagagaagcgagcggctgaggctcgtgttcagaagattcacaagttacaagagagtctg
atgagccaggaccagcagatctgctccagcctggaggagaagctgcagatctacaccgag
ctctctgctctgagtgggaggacggacgcctcggcagtggagccgcggctgctcgtccag
ccgcactcagaggacgtgccccaggcggccgagctgctggttgcagctctgcaggaggct
gaaaacctcaaagccacgctgtcagccaaggcccgttctccgtccagccacggcccggac
tctgacacggactctgtgttcgccgtcagccctgctccgcatgtacagctcccctcagat
tcttcagagccctcacctgcgacccccgaggccggggaggggagctggacccaggccgtc
gttcctcagtccccggagtcggatgacattgacttgaaggtacataagcgaaaggtttct
caaagtgtccaaagcctgacgcagttactctacagtctgcaggctgcagtgaccatccaa
gacagctgctacgaggtccagaggctcctcctccaagagaccgggcgcccgtcgccacga
gctcagcgacctcaccttccgagcgcccgcggcaacaccctgcaagagcaggagaagcaa
cgcaacctggagaagcagaaggaggaggtggtggcggctcagcggctccaggaccgactg
cgccaggagaaggagcgctgggacagggcgtgccaggccagggagagccagcagggggag
caggagagcaggctggaggagagggagaggcagtgccacctggaggtggagaggctgcgg
cgcgagagggaagagctggacgagcagcaggaggagtaccagcagagtttggagcggctc
agggagggccagaggagcgtggagagggagcgagagcgtctggagggccagcagaagctg
ctccagacgtggacgcacggccgccagaggagcctgcccactgtgattccacacatggtc
atacctctagatgtgcagcaggactcggcacccagtcagtcaagggacctcggcggtaac
ggctccatgtttgtgaacgaggctgcgttcgccagcaccagcatcaacaaccgccacgtc
caccacaaaaagaatgaccccagcaaacataattgtctcaacaccctgctggccaggtcc
aacagcagacagccccccatagctaagaccccccatagtcctcactcagactcccaggga
tggatgatggggacggggtacctctacagccctgcaggaaagctgggactgcagcacaca
cccactgatcatagcagtcacagctacatcggggagacctggttggcgagagcaagtgga
gctgatctgtatccggagctcccgcatcccagagaccctcagctggacctcagtgcgctg
gtttccttggagactgacagcggcggggaggagggcagggaagaaaccatagtgtacctc
tga
DBGET
integrated database retrieval system
