Hippoglossus hippoglossus (Atlantic halibut): 117771670
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Entry
117771670 CDS
T07778
Symbol
tmc2a
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117771670 (tmc2a)
03037 Cilium and associated proteins [BR:
hhip03037
]
117771670 (tmc2a)
Transporters [BR:
hhip02000
]
Other transporters
Pores ion channels [TC:
1
]
117771670 (tmc2a)
Cilium and associated proteins [BR:
hhip03037
]
Other cilia and associated proteins
Stereociliary proteins
117771670 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Arc_capsid_dom
Motif
Other DBs
NCBI-GeneID:
117771670
NCBI-ProteinID:
XP_034458212
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All DBs
Position
12:18697335..18704696
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AA seq
950 aa
AA seq
DB search
MPRKSEVVQMDDVGIDVDGDLSDSDDGATQRRGNRRPAAGRGGAKGRGRGKKPASEDEED
EEEDEAPRGRRGANRKKPAKKRGGKDDDDEDESEDEAPKRKRGGAANKRRGGKAQDSDEE
DSDDGKGKKGKKGGGRKGGKEEESKGKKGDAKGKDKGKDKGKDKEDDKDKKKKKKKKDDS
SSDSSSDSDEEESMSEGEMGRLMEEVEEKKKLIATIRNKPWRMKRRLTHLREAQQFVDKF
EGALGKGKGRKWYAYKVMMTKKWIKFQRDFENFRTACIPWERKIKEVESHFGSSVASYFI
FLRWMYGMNLVLFGFTFGLVVIPEVLMGLPYGSIPRKTVPRAEQPTAQDYSVLMDFNGYC
KYSVLFYGFYNDQRTIGLLKFRLPLSYLMVGIGSFGYSLMVVIRTMAKNADVGGGDGEEG
EFTFAWKMFTSWDYLIGNSETADNKYASITTSFKESIVDEQENQKDENIHLRRFLRVLAN
FMILCSLGGSGYLIYFVVKRSQEFASRTDLSWYEKNELEIIMSLLGLVCPPLFETIAELE
DYHPRIALKWQLGRIFALFLGNLYTFLFALFDEVNNKLEQEDSIRNASLWAVKEYYANFT
RYINDSEVTPPPMDPSDIIRGPCWETAVGIEFVKLTVSDIQVTYLTILIGDFARAVIVRF
LNYCWCWDLEAGFPSYGEFDISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQ
CWAVMATNVPHERVFKASKSNNFYMGLLLLILFLSLLPVVYTIMTLPPSFDCGPFSGKPK
MFDVIMETIDLDLPAFLGTLFSYAANPGLIIPAVLLMVLAIYYLNSVSEAYMNSNMELKK
KMQMARDEEKNRRNNTDSTNQVMKDLEDLLPNGSLAPPAPPPQPEKPPEQEPRPTRTKPG
KGVNLQKDVTLASPNPNVQSPVSRPPGPRGAGPMPGPGRGRGRGRGAPPR
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaaaagtgaggtggttcaaatggacgacgtcgggatcgacgtcgatggagat
ttgagtgacagtgacgatggcgccacccagaggagagggaacagaagaccggcggctgga
agaggaggtgcaaagggaagaggccgaggcaagaaaccagccagcgaggacgaagaagac
gaggaggaagatgaagctcccaggggacgcagaggtgcaaacaggaagaagcccgccaag
aaacgtggcggcaaggacgacgatgatgaagacgagagcgaggacgaagcgcccaagagg
aaacgaggaggagcggccaataagagaagaggaggcaaagctcaggacagcgatgaggag
gatagtgatgatgggaaaggaaagaagggaaagaagggaggagggaggaaaggagggaag
gaggaggagagtaagggtaagaagggggacgccaaagggaaggacaaggggaaggacaag
gggaaagacaaggaggacgacaaggacaagaagaagaagaagaagaaaaaggacgacagt
tcatccgactccagctccgactccgacgaggaggagtccatgtcagagggcgagatgggc
cgactgatggaggaggtggaggagaaaaagaaactgatcgccacaatcaggaacaagccg
tggaggatgaagcggcgcctcacgcacctcagggaggctcaacagtttgtggataagttc
gaaggcgctctggggaaaggaaaagggaggaagtggtacgcctacaaagtgatgatgaca
aagaaatggatcaagtttcaaagggattttgagaatttccggacggcctgtatcccctgg
gagaggaagatcaaggaggtggaaagtcactttgggtcctcggtggcgtcttacttcatc
ttcctgcgctggatgtacggcatgaacctcgtcctgttcggcttcaccttcggcctggtg
gtcatccccgaggttctgatgggacttccctatggttcgattcccaggaaaactgtcccc
agagccgagcagcccaccgctcaggactactccgtcctcatggacttcaatggctactgc
aaatactcggtcctgttctacggattttacaacgaccagaggaccatcggcttgttgaag
ttccggctgcctctgtcctatctcatggtcgggatcggcagcttcggctacagcctgatg
gtcgtgattcgcacaatggcgaagaacgctgacgtcgggggtggagacggggaggaagga
gagttcacatttgcctggaagatgttcaccagctgggattacctcatcggcaactcagag
accgccgacaacaagtacgcctccatcaccaccagcttcaaggagtcgatagtggacgag
caggagaaccagaaggacgagaacattcacctgcggaggttcctcagggtcctggcgaac
ttcatgatcctctgcagcctcggcggcagcggctacctcatctactttgtggtgaagagg
tctcaggagttcgcctccaggaccgacctcagctggtacgagaagaacgagttggagatc
atcatgtctctgctgggtctggtgtgtcctcctctgtttgagaccatcgctgagctggag
gactaccaccctcgaatcgccctcaagtggcagctgggacgcatcttcgccctcttcctg
ggaaacctctacaccttcctgttcgctctgttcgacgaggtcaacaacaagctggaacaa
gaggactccataaggaacgcctccctctgggccgtgaaggaatactacgccaacttcacc
cgttacatcaacgactccgaggtcacccctcctcccatggatccgtctgacatcatccga
ggaccctgctgggaaactgccgtcggcattgagtttgtgaagctgacggtgtcggacatc
caggtgacctacctgacgattctgatcggagacttcgccagagccgtcatcgtccgcttc
ctgaactactgctggtgctgggacctggaggccggatttccgtcgtatggagagttcgac
atcagtggaaatgttctcggattagttttcaatcaagggatgatctggatgggggctttt
tacgctcccgggctggtcggcatcaacgtgctccgcctcctcagctccatgtactaccag
tgctgggccgtgatggccaccaacgtcccccacgagagagtcttcaaggcctccaagtcc
aacaacttctacatgggtctgctgctcctcatcctcttcctcagcctgctgccggtggtc
tacaccatcatgaccctgccgccctcgttcgactgtggacccttcagcgggaagcccaag
atgttcgacgtgatcatggagacgatcgacctggacctgcccgccttcctggggacgctc
ttcagctacgcagccaacccgggcctcatcatcccagctgtgctgctcatggtactggcc
atctactacctgaactccgtgtctgaggcctacatgaactccaacatggagctgaagaag
aagatgcagatggcccgggacgaggagaagaaccggaggaacaacacagacagcaccaat
caggtcatgaaagacctggaggacctgctgcccaacggctccctcgcccccccggctcct
ccaccacagcctgaaaaaccaccggagcaagaaccaaggccgaccaggacgaagcccggt
aaaggagtcaacctgcagaaagacgtgactctggcatcacccaaccccaacgtgcagagc
ccagtgagtcggcctccggggcccagaggagcggggccgatgccgggtccaggccggggc
cggggccgcggcagaggggcccctccgagataa
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