Hippoglossus hippoglossus (Atlantic halibut): 117771693
Help
Entry
117771693 CDS
T07778
Symbol
rc3h2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hhip03000
]
117771693 (rc3h2)
04121 Ubiquitin system [BR:
hhip04121
]
117771693 (rc3h2)
Transcription factors [BR:
hhip03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
117771693 (rc3h2)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
117771693 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-RING_2
zf-CCCH
zf-RING_UBOX
zf-CCCH_4
zf_CCCH_4
zf-CCCH_UNK
Prok-RING_4
zf-C3HC4_2
zf-RING_4
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
117771693
NCBI-ProteinID:
XP_034458259
LinkDB
All DBs
Position
12:13349050..13371849
Genome browser
AA seq
1160 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQIPDMQPVSLSGAAEVENYEVCRVCVEELALYLKPISGAKGVAT
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRQHLELLADI
DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSNSVGRAFPLAPGVMGKTFTMEGSLHEDVSA
GVVEGLKGTGDNATNLTDGVPGVTHPQFITRGADIIEEMKRVVPNGTSGANGCNGLPGTN
RTTSGATEQKPISPPRTPVSHSASSPLTPVARGDGGAPIPKHGQFMLRAPHPSQATELYY
QEPHSAYETPHYQQTSGSYYPSTLHHPHKPCMARFLRSSNVPESPLPPSMGPPPTSYHSD
PQSPHPPSSSSSGYPPHPPRDRMGPAFHPHPGQPQYGPLAPAHGVYAPLYDSRRVWRPQL
YHREDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGADHRTGLHRDYSRVPLGYEDL
FRRKQEQWAHHHHHHNTNRPSQSSPIFTIDFGTEHLESSGGQCAGCRFRGEESLAHYSPW
SCGTIGPCLSPFEPETLTHSSAHSCSEHPELEANGGRGGGGGGGGGGGGGGSSSSSSVGK
RWLHSLDHYRRLKDEDPIIPFSEGPIISKWGAISRASRTGYHTTDPVQATACQRSSSTTP
INFKDYNPHLDHSDYRWGSRGSDSSSHSSFLESEQLCASELHGRRTSISSGERIVTCNLQ
AHHAVYSQDRERAESEPDPGRDIELELCALDMEDSDPQERRSQESLDLITSPSQDASHLL
PPPCSSPLLSSPVKERPRTEGTLTEKMDAHLLKKMAFRKSLSPGGLVSRGLGVGKLLLRT
GPSRLGDPSTPGTEMLLNGS
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggcagcccagtggacagagttcctttcctgtcccatctgctacaatgag
ttcgacagcagcggccaccagcccatcagcctgggctgctcccacacggtgtgcaagacc
tgcctgcacaaactgcaccgcaaagcctgccccttcgaccagacgccaatcagcaccgac
atcgacctgctgccggtcaactgtgccctgctgcagctggtcggagctcagatccctgat
atgcagccggtgagcctgagtggtgcagcagaggtggagaactatgaggtctgcagggtg
tgtgtagaagagctggctctctacctgaaacctatcagcggagcaaaaggtgtcgcgacc
ctgagtccgagtgtgctcagtcggcccatgcagaggaagctggtgaccctggtgaactgc
cagctggtggaggaggagggccgtgtgcgggcggtgcgggcaggccggtcgctgggggaa
cgaaccgtgaccgagctcatcctgcagcaccagaacccccagcagctctctgccaacctc
tgggcggcggtgcgggcgcggggatgtcagttcctgggacctgctatgcaagaagatgca
ctgaagctggttttactggcgctggaggacggctcagctctgtccaggaaggtgctggtt
ttgtttgtagtccagaagctcgaggctcggttcccccaggcctccaaaaccagcataggc
cacgtggtgcagctgctctacagggcctcctgcttcaaggtgactaagcgtgatgaggac
tcttcactaatgcagctgaaggaagagtttcgcacatacgaggctctcaggcgggaacac
gatgcccagattgtgcacatcgccatggaggcgggcctacggatctcaccggagcagtgg
tcgtctctgctgtacggagacctggtccacaagtcacacatgcagtccatcattgacaag
ctgcagtctccagagtcatttgcaaagagcgtccaggagctgacaatcgttctgcagagg
acaggagacccagccaacctcacgagcctcagacagcacctcgagctgctggccgacata
gaccacaatccagacgccccagcaccatcatgggaggagctggaaagcgtgatgttggct
gtgaagttggtggttcacggactggtggaattcatacagaacttcagcaagaagagccac
gacacgccgcagcctcaagccaacagcaagtataagaccagcatgtgccgggacctccgt
caacagggcggctgtccccgaggaaccaactgtacattcgcgcacacacaggacgaactg
gagaaatttagactgaggaacaagaagagcaacagcgtgggccgcgcatttccgttggcg
cccggggttatgggtaaaaccttcaccatggagggcagcctccatgaagacgtgtcggcg
ggagtggtagaggggctcaaaggcacaggggacaatgcaactaacctgacagacggtgtt
cctggcgtgactcacccgcagtttatcaccagaggggctgacattatcgaggaaatgaag
agggtggtgccaaatggaaccagtggggcgaacgggtgcaacgggctgcctggtaccaac
agaaccacgtcgggtgcaacggaacagaagcccatctctcctcccaggactccagtcagc
cactcagcatcatctcccttgaccccagtcgcgcggggtgacggtggcgctccgataccc
aaacacggtcagttcatgctgcgtgcgccacatccttcacaggcgacagagctgtactat
caggagccccactctgcttatgaaacgccccattatcaacaaacctcaggttcttattac
ccttctactcttcatcatcctcacaaaccctgcatggctcgcttcctcaggtcgtccaat
gtcccagaatcccctctgccgccctccatgggacctccaccaacttcctaccacagtgac
cctcaatcgcctcacccaccctcctcctcttcctcggggtaccccccacacccacccaga
gatcggatgggtcccgccttccatccccacccggggcagcctcagtatgggcctctggct
cctgctcatggggtttatgctccgctctatgacagcaggagagtatggaggcctcagctg
taccaccgagaggacgccaggagtaactcgctgcctccagaggtgctgcattcctccgtc
taccagcctccactcagggagagattcaactctctagacagcaactactgctccggagcg
gaccatcgcacagggctacacagggattacagtcgtgttcctctgggctacgaggatctg
ttcaggaggaagcaggagcagtgggcgcatcatcaccaccatcacaacaccaacagaccc
tcccagtcctcccccatcttcaccatcgactttggaactgagcatttggagagcagcgga
ggccagtgcgccgggtgccggttcagaggggaggaaagcttagcccactactccccatgg
tcctgtggcaccatcggcccctgcctcagtccctttgagcctgagacactgacgcacagc
tccgctcactcctgctcggagcacccggagttggaggctaacgggggcagaggcggcggc
ggcggcggcggcggcggcggcggtggcggcggcagcagcagcagcagtagtgtcgggaag
cggtggctgcattcgttggatcactaccggcgcttaaaagatgaggaccccatcattccc
ttcagcgaggggcccatcatctccaagtggggggccatatccagggcgtcacgcacgggc
taccacaccaccgacccggttcaagccacggcctgccagagaagctccagcaccacaccc
atcaactttaaagattataacccacacttggatcacagtgactacaggtggggctccaga
ggatcagactcttccagccactccagtttcctcgaaagtgagcagctttgtgcatcggag
cttcacggccggcgaacctcgataagcagtggagagagaatcgtgacctgtaatctgcag
gcgcatcacgccgtctacagccaggaccgggagcgagccgagagcgagccggacccgggc
cgagacattgagctggaactgtgcgctctggacatggaggattcagacccccaggagaga
aggtctcaggagtctttagacctgattacttctccgtctcaggatgcttcccacctcctg
ccgcctccctgctcctctcccctcctctcatcccctgtgaaggaacgcccccgaacagag
ggtactttgacagaaaagatggatgctcacctgctgaaaaagatggccttcagaaagtct
ctgtctcccggcgggttggtctcgaggggtcttggcgtcggcaagctgctgctgcggacc
ggaccctctcgactgggggacccttccacgcccggcacagagatgctgctgaatggaagc
taa
DBGET
integrated database retrieval system
