Hippoglossus hippoglossus (Atlantic halibut): 117771744
Help
Entry
117771744 CDS
T07778
Name
(RefSeq) nipped-B-like protein isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
117771744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117771744
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
117771744
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT_EZ
HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
117771744
NCBI-ProteinID:
XP_034458353
LinkDB
All DBs
Position
12:11510175..11529439
Genome browser
AA seq
2650 aa
AA seq
DB search
MNGDMPHVPITTLAGIASLTDLLNQLPLPSPLPATTAKSLLYNGRISEEVSSLLVCRDEN
LVTQLAHSLTQVSTEHIELKDNLGNDEPEGDMPILLQTLLSRNPKVFGDKSVMQQPMMQQ
YKIAQNQMHGSPGSNYQQTAVPQSPPGCFTSPQSGSASRFVPQQNSPIPSPYTPQSPADY
MQYNPPSYSQHHQTQQVPGGVRNSHDNKVSGLSSSSSNHNARLVTDEEYMNMAHRLGNED
NDPSVRAAAYRVKSPQSVCSSAGSEEMAKTGSRPDLLLASANRKKKQRERSKEENEQMDK
NNLYDIVGSPAKDSAKLTLKLSRVKIPDVDESREFPPRAHMDSDHEIDLMNNNQLSRDAQ
DFSHKFGAAEQVNCQPPPVRPNTKEIAVVGGGVYDDAEMDAIAEIERIESETANERERWS
KEVQDKDKPLKKRKQDSYPQESGAEAGDGPAVQGGNTGSKVTPKKTNPASNCASRPALMV
SIDLQQAGRVTGQPVVVLEANPLCDDQLKHLNSKADVKVDKVVENKPGINKKHSDNPKER
IQKKSGSDGQPEKQEASLVAKQKQEHQRESKHKHDGKAESGNGRSDERRTDTPRQKHDKH
SESRNKEEKNHNSHRSHVNQAETPKTISRMERNSKHGEDKAKDKEKEKEKDKDKDKDKDK
DKDKDKDGNKEREKDREKDRAKHRERDKDRDKCKDRNSDRDRDREKDRERKHKTQSTENC
NRHSPERHSKSDSPRVKQDGSRKSADFNGRQKTDTSALQSPQNKKEERGGDGSIRCQTGN
KQQSLETKPSEFPSFLLGGKTGSLKNFVIPKLKRDGKEKEPLPPNKLKEVWSEPLIRLER
MSLVENLNKGAKPVVVVQKLSVDEVKKIIKESRNAHGSKSKNSSSFDKSGKEKSLCEKTN
KRRHSVVSKKLKYAELDSNDEDKDDDEDDDSENKSAKKRHKKDHDKTSKQEERKGSGEHR
QSGGVQNVRRGSGNRPRDRILAESDEESPPPILSDVAKKLKKKEKHKNKKAYDPKMTLEE
VMDSSTFKRFAASMDSILENLDEVDLTAEDDDEIPQELLLGKQQLNQLGNDSAKIKAMGI
FNKFSSSKLMKILNVLEKNIQDSVKLSTLLSHDNDSMDEERLWRDLIMERVTKSADACLT
ALNIMTSPHMPKVVYMEDVIERVLQFTKFHLQSSLYPQYDPAYRVDPHGGGVHTPKSKRG
KSSSHKQKVVVVLYSKVCEIVSSISELLELQLQTDTTILQVSTLGITPFFVENVSELQLC
AITLVTAVFSRYEKHRQLILEEIFTSLARLPTNKRSLRNFRLNNGDSDGEPVYIQMVSAL
VLQLIQCVVHLPSVREAEDESHKKVDKDVLITNTFETAMRTAQNFLSVFLKKCGSKQGEE
DYRPLFENFVHDLLSTINKPEWPASELLLSLLGRLLVHQFSNKQTEMALRVASLDYLGTV
ASRLRKDAVTSNMDQKAIDRILRETPGSDEVQQLQKDLLDYLDESSDKDSSLLFARKFYI
AQWFRDATSEAEKAMKSQNEDENWKGHSHSKDVDSTEEIMQKADARKKFLRKVMKTSQSH
SSALRMNAIDYDDSCVIVRYLASMRPFAQSFDIYLSQILRVLGESAIAVRTKAMKCLSEV
VAVDPSILARLDMQRGVHCRLMDNSTSVREAAVELLGRFVLSRPQLIEQYYDMLIERILD
TGISVRKRVIKILRDICLEQPEFHKITEMCVKMIRRVNDEEGIKKLVNETFQKLWFTPTP
GHDKEAMTRKILNITDVVLACKDTGYDWFEQLLQNLLKSEKDASYKPARKACVQLVDNLV
EHILKYEESLADCEDKGVNSGRLVACITTLYLFSKIKAELMVKHAMTMQPYLTTKCNTQN
DFMLICNVAKILELVVPLMDQPSETFLNTIEEDLMKLIIKYGMTVVQHSVSCLGAVVNKV
THNYKFVWACFNRYYGALAKLKTQHQEDPSSSTLVANKPTLLRSLFTVGALCRHFDFDQE
DFKGASKIIIKDKVLELLLYFTTHEEEEVQIKAIIGLGFQFIMNPEIMFVQDVKVLYNSI
LSDETTMVSRKIQVLKNLQTYLQEEDSRMQEADRGWKSQAKEEDLKEMGDISSGMSSSIM
QIYLKQVLDSFFHSQSTVRHFALSVITLTLNQGLVHPVQCVPYLIAMGTDPEPTMKNKAD
QQLVDIDKKYTGFIHMKAVAGLKMSYQVQQAINGPKKTVIRGVRPDEPDTALCSHLYSLV
RGNRQYRRAFLISLLNLFDDSSKTEANMLLFIADNFACFPYQTQEEPLFIMHHIDITLSV
SGSNLLQSFKESLRKEPVQREKKMKKKKKKKKKKKKKQHRRMQNSSDEDENEEQSSSSSS
SSSSSSSDEEEEVVHKSKKTVGSDSDMEDEDAVMDRLPENPSPLLEFANASQGILLLLVL
KQHLKNLYGFSDSKIQKYSPTESAKVYEKAVNRKSKVHFNPRQTLEYLKSDLAITDLSHE
TKRNIVKQYLDFKVLMEHLDRDEEEEGEASANARNKAITSLLKGPKLQNHNHNNHTAPVD
TDEEDSDDEDVPGRKPRKGKDGVEDSGHMNEGVDAMDVIAICRPKYKDRPQIARVIQKTK
AGYSIHWMTGTYSGPWAVAKKRDGRKKVPWVDTIKESDIIYKKISLTSGHKLTNKVAQTL
RALYAAKEGN
NT seq
7953 nt
NT seq
+upstream
nt +downstream
nt
atgaatggtgatatgcctcatgtccccatcactactctcgctggaattgctagcctgaca
gacttgttgaaccagctgcccttgccttctcctctcccggccactactgctaagagtctg
ctctacaatggaaggatctctgaagaggtcagcagcctcctggtgtgtcgggacgaaaat
ctggtgactcagctggcacatagccttacccaggtctccactgaacacatagagttgaag
gacaacttggggaacgatgaacccgagggtgacatgccaatacttctacaaacgttgctt
tccaggaaccccaaagtctttggggacaaaagtgtgatgcagcagccgatgatgcaacag
tataagatagcccagaatcaaatgcatgggagtccaggatcgaattaccagcagaccgct
gttcctcaaagcccccctggatgttttacgtccccgcagtctgggtcagcttcccggttc
gtaccccagcagaacagccccatacccagtccctatactccccagagtcctgcagactac
atgcagtacaatccacccagttattcccagcaccatcagactcagcaagttcctggtggt
gtaagaaacagccatgacaacaaggtctctggtctctcaagtagttcttctaatcacaat
gcaagactggtcaccgatgaagaatacatgaacatggctcacagactgggaaatgaggac
aatgacccctctgtgagggctgctgcatatcgagtcaaatcaccacagtctgtgtgttcc
tctgctggaagtgaagagatggcaaaaacaggatccaggcctgacctgctcctcgcctct
gccaaccgcaaaaagaagcagagagagagaagtaaagaggaaaatgagcagatggataaa
aataacttgtacgacattgttggttccccagcaaaagactctgccaagctgacgctaaag
ctgtcccgagtgaagattccagatgttgatgaatccagagaatttcctccgcgggcacat
atggactcagaccatgaaattgatttgatgaataataatcagttgtcaagggacgctcag
gacttttcacacaagtttggtgctgcggagcaggtgaactgtcagccgcctcctgttcgg
ccaaataccaaggagattgcagtcgtcggtgggggcgtgtatgatgatgcggagatggat
gcaattgcagaaattgagagaatagaaagcgagacagccaatgagagagaacgatggtct
aaagaagtccaggataaagacaagccactgaagaaacggaagcaagactcatatcctcag
gaatccggagcagaggcaggtgacggacctgctgtacaagggggcaacactggcagcaag
gtgacacctaagaagacaaatcccgcaagtaactgtgccagtcggccggctttgatggtc
agtattgacctgcagcaagctggcagagtgaccggacaacctgtcgtggttttggaagca
aatccgttgtgtgatgaccagctgaaacacctaaattcaaaggctgatgtgaaggtagac
aaagttgttgaaaacaaacctgggatcaacaaaaagcattctgacaatcccaaagaacgt
attcaaaaaaagtctggctcagatgggcaaccagagaagcaggaagcatctctggttgct
aaacagaagcaggagcaccagcgggaatccaaacacaagcatgatggcaaggcggagagt
ggtaacggccgttccgatgaaagacggacagacacaccacggcaaaaacatgacaagcat
tcagagtcgcgcaacaaagaggaaaagaaccacaacagtcacagatcccatgtcaaccaa
gcagagactccaaaaaccattagtaggatggagcgtaactccaaacacggagaggacaaa
gccaaggataaagaaaaagaaaaagaaaaggataaggacaaagacaaagacaaagacaaa
gacaaagacaaagacaaagatggaaataaagaaagagaaaaagatagagagaaggacagg
gccaaacacagagaaagggataaagatagagataaatgtaaagatagaaatagcgataga
gatagggacagagagaaagacagggaaaggaaacacaagacacagtcaacagaaaactgc
aacagacactctcctgaacgtcattcgaaatccgacagcccgagagtgaagcaagacggg
agccgaaagtccgctgactttaatggtcgtcagaagacagacacttccgcccttcagagc
ccccaaaataaaaaagaagaaagaggtggggatggcagcatcagatgccaaactggaaac
aaacagcagtcgttggagacaaaaccgagcgagttcccctcattcctgctcggtggcaag
acggggagtctgaagaacttcgtgattccaaaattgaaacgagacggcaaagaaaaagag
ccactacctccaaacaaattgaaagaggtctggagcgaacccctgatccgactggagaga
atgtctttggtagagaacttaaacaaaggagcgaagcccgttgttgtggttcagaaactc
agtgttgatgaggtgaaaaagatcatcaaggaaagcaggaacgcacacggctccaaatcc
aagaactcgtcctccttcgacaaatcagggaaagagaagtcactttgtgagaagacaaac
aagcgaaggcacagtgtcgtcagcaagaaattgaagtacgccgagttggactcaaatgat
gaagacaaagatgatgatgaagacgatgactctgaaaataagtctgcaaagaaacggcac
aagaaagaccatgacaagacctcgaagcaggaagagaggaaaggctctggagagcaccgt
caaagcggaggtgttcaaaacgttcgccgggggtccggtaaccgtcctcgtgataggatc
ctggctgaatcggatgaagaatctccaccgccaatcctaagtgatgttgccaaaaaattg
aagaaaaaagagaaacataaaaacaagaaggcgtacgatcccaagatgacactggaggaa
gttatggactcctccacatttaagagattcgcagccagtatggatagcatcctcgagaac
cttgatgaggtggatcttactgctgaagatgatgatgaaatacctcaggagctcttgctt
ggaaagcagcagttgaaccagctcggaaacgattctgctaagattaaagctatgggcatc
tttaacaagttttcttcaagcaaactgatgaaaatactaaatgtcctggagaagaacatt
caggacagtgtcaaactttccacattattgagtcatgataatgattccatggacgaggag
cggctgtggcgcgacctcatcatggagcgggtgaccaagtccgccgatgcctgtctgact
gcactcaacatcatgacgtctccacacatgcccaaggttgtgtacatggaggatgtgatc
gagagggtgttgcagttcaccaagttccatctgcagagctctctgtaccctcagtacgac
ccggcctacagggtggatccccacggaggtggcgtgcacacaccaaagtccaagcgagga
aagagctccagccataaacagaaggtggtggtcgtgctctacagcaaagtgtgtgaaatc
gtcagcagcatctcggagctcctggagttacagctgcaaactgacaccacgattctccag
gtgtccactctgggtattactccgttttttgtggagaacgtcagcgagctgcagttgtgc
gccatcacgctggtgacagcagtcttctctcgttacgagaaacacaggcagctcattctt
gaagagatcttcacctcccttgccagactgcctactaataaacgcagcctcaggaacttc
aggctgaacaacggtgattcggatggagagcccgtgtacatccagatggtctctgctctg
gttcttcagctcatccagtgtgtggttcaccttccctctgtgagagaagcagaggatgaa
tctcacaagaaggtggataaagacgtccttatcacaaacacgtttgaaactgccatgagg
acagctcagaacttcctctcggtgtttctcaagaagtgtggcagtaagcagggagaggag
gactacaggcctctgtttgagaacttcgttcacgacctcctgtccacaatcaacaagccc
gagtggcctgcatctgaactactgctcagtttactgggccggctgttggtgcaccagttc
agtaacaagcagacagaaatggctctcagagtggcgtctctggactacctcggcactgta
gcttcccgactgcgcaaagatgctgtaaccagcaacatggaccaaaaggctattgaccgc
attctcagagagacgccaggcagtgatgaggtgcagcaacttcagaaggacttattagat
tacctagatgagagcagtgacaaagattcatctctattgtttgccaggaaattttatatt
gcccagtggttcagggacgcaacaagtgaggcagagaaagcaatgaagtctcaaaatgag
gacgagaactggaaaggtcacagtcattccaaggatgtcgactcgactgaggagattatg
cagaaagccgatgcacgaaagaaattcctacgcaaggtcatgaagacttcacaatcacat
tccagtgctctgaggatgaacgcaatagactacgatgattcgtgtgtaatcgtcagatat
ctggcctctatgaggccttttgcccagagctttgatatttatttatcacagattctgaga
gttttgggtgagagtgctattgcagtcagaactaaagccatgaagtgtctgtctgaagta
gtggctgtggatccaagtattctggcccggttggatatgcagcgtggggttcattgtcgc
ctcatggacaactcaaccagtgtgcgagaggccgctgtggagctcctgggccgttttgtg
ctaagtcgacctcagctcattgagcagtactacgatatgctcattgaaaggatattggac
acaggtatcagtgtaaggaagagggtcattaagatcctgagggatatctgcctggagcaa
ccagaattccacaagatcacggagatgtgtgtgaagatgatccgaagagtcaatgacgag
gaggggatcaagaaattggtgaatgagactttccagaaactctggttcacgcccacaccc
ggccacgacaaagaggccatgaccagaaagatcttgaacatcacagatgtggtgttggca
tgtaaagatacaggctacgattggtttgagcaacttctgcagaacctgctgaagtcagag
aaggacgcttcgtacaaacctgccaggaaggcctgtgttcagctggtggacaatctcgtg
gaacacatactgaaatacgaggagtctcttgcagactgtgaggacaaaggggtcaactca
ggtcgtctcgtagcatgcatcaccactctctacctgttcagcaaaatcaaagcagagtta
atggtcaaacatgctatgactatgcagccctacctgaccacaaagtgcaatactcagaat
gacttcatgctgatctgcaacgtggccaagatcttggagctggtcgttccactgatggat
caaccgagtgagactttcctcaataccatagaagaagacctgatgaagctcatcatcaaa
tatggcatgacggttgtacaacacagtgtgagctgtctcggtgcggttgtgaacaaggtc
acacacaactacaagtttgtttgggcttgttttaatcgttactatggagctctggcaaaa
ctgaagacccagcaccaggaggaccccagcagctccaccctggtagcgaacaagccgact
ctcctgcggtctctgttcacggtgggggctctctgccgacactttgattttgaccaggag
gatttcaagggtgccagcaagattatcatcaaggacaaagtgttggagcttctgctgtac
ttcaccacgcatgaagaggaggaagtccagatcaaggccatcataggtctaggcttccag
ttcatcatgaacccagagatcatgtttgtgcaggatgtgaaggttctgtacaacagtatc
ctctcagatgagaccactatggtcagtcggaagatccaggtgttaaaaaacctgcagact
tacctgcaggaggaggactcccgcatgcaggaggccgatcgcggatggaagagtcaagcc
aaggaggaggatctgaaggaaatgggggacatctcatcgggcatgagcagctccataatg
cagatttacctgaagcaggtgctggactccttcttccactcacagtccactgttcgacac
tttgccctgagcgtcattacactgactctaaaccagggcctcgtccatccggtgcagtgt
gtgccctacttgatcgcaatgggaacagacccagagccaaccatgaagaacaaggccgat
caacagctggtggatattgacaagaaatatacagggttcatccatatgaaggccgtcgca
ggattgaagatgtcttaccaggtgcaacaggccataaatggaccaaagaaaacagtgatc
cgaggtgttcgtcccgatgagccagacactgccctctgctcacatctctactccttggtc
cgtgggaacaggcaatatcgacgggctttcctcatttccctgctcaacctgtttgatgac
agctctaaaacagaggcgaacatgctgcttttcatagcagacaactttgcctgcttcccc
taccagacccaggaggagcctcttttcatcatgcaccacatagacattactctctctgtc
tctggtagcaaccttcttcagtctttcaaggagtcgttacggaaagagcctgtacagcgg
gaaaagaagatgaaaaagaagaagaaaaagaagaagaagaagaagaagaagcagcaccgg
aggatgcaaaatagctctgatgaagatgagaatgaagagcagagcagcagcagctccagc
agcagtagctctagcagcagcgatgaggaggaagaggtggtccataagagtaagaaaaca
gtgggttctgactctgacatggaggatgaggatgcagtgatggaccgtctacctgagaac
cccagccctctgctggagttcgccaacgcttcccagggtattctgctgctgctggtgctc
aaacaacatctgaagaatctgtatggcttctcagacagcaaaatccagaagtattctccg
actgagtctgcgaaggtgtacgaaaaggcagtgaacaggaaatccaaagtccacttcaac
cctcgccagaccctggaatacctgaagagtgatctagccatcacagatctcagtcacgag
accaagaggaacattgtgaaacagtatttggatttcaaggtactcatggagcacttggat
cgcgacgaagaagaggagggggaggcgagtgccaacgccagaaacaaagccattacttca
ctgttgaagggcccgaaactccagaaccacaatcacaataatcacactgccccggtggac
acagacgaagaggatagtgacgatgaagatgtgcctggaaggaaaccaaggaaaggcaag
gatggcgtcgaggattcgggtcacatgaatgagggggtggatgccatggacgtcatcgcc
atctgccgtcccaaatacaaagacagaccacagattgccagggtcatccagaagaccaaa
gctggctacagtatacattggatgactgggacttactctgggccatgggctgtggcaaag
aaacgggacggtcgcaaaaaggtgccttgggtcgacactatcaaggagtcggatattatt
tataagaaaatctctttgacaagcggacacaagctcacaaacaaagtggcacagacgtta
cgggcgctgtacgctgccaaggaaggcaactga
DBGET
integrated database retrieval system
