Hippoglossus hippoglossus (Atlantic halibut): 117771833
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Entry
117771833 CDS
T07778
Name
(RefSeq) protein SDA1 homolog isoform X1
KO
K14856
protein SDA1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hhip03009
]
117771833
Ribosome biogenesis [BR:
hhip03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
117771833
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
HbrB
Motif
Other DBs
NCBI-GeneID:
117771833
NCBI-ProteinID:
XP_034458514
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Position
12:complement(8272569..8290530)
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AA seq
688 aa
AA seq
DB search
MSGRQSNKLPNNLPQLQNLIKRDPQSYVEEFLQQFRHYQSNIQIFKLQPDKPNKELAELV
MFLAQVSHCYLQQLSSFPQELSGLLLSYHTVLQPDLRMTFCKAMILLRNKNLIDPTCLLE
LFFELLRCHDKLLRKTLYTHIVVDIKNINAKHKNNKVNTTLQNFMYTMLRDSNPIAAKIS
LDVMAELYKRNIWNDAKTVNVITTACFCKVTKIVVAGLKFFLGKDEDEKNDSDSDSEPEG
PTTRDVMVKYSTGRKTSKNKKKMEKAMKVLKKHKKKAKVEVFNFSAIHLIHDPQDFSEKL
LKQLESSKERFEVKIMMMELISRLVGIHELFLFNFYPFVQRFLQPHQREVTKILLCAAQA
SHQLVPPEVIEPVIMTIANNFVTDRNSGEVMTVGINAIKELTARCPLAINEDLLQDLALY
KNHKDKNVMMSARGLIQLFRNLDPHMLLKKDRGRPTEASTEAKIRDYGELESKDYIPGAE
VLEVEGEAKKEGEEDGEGWESASIGDEDEDGEWVDVHHSADEDAGEMAEKLQSIPVEERK
AKAAAVSGSRLLTQDEFKKIRLVQMAKEVNNAPGKGQKRKIVTSDDEEDNRGELLTLRNI
EKLHKKPKSDKETRLATAMEGRSDRKDFVRKHSKLNPHASTSNKEKRKNKNFMMMRHSQN
VRTKGKRSFRDRQIALRDALLKRKKQHH
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atgtctggtcgacagagcaacaaactgccaaacaatttgccacaactgcagaacctcatc
aaacgggacccgcagtcgtacgtagaggagttcctccagcagttccgacactaccagtcc
aatatccaaatcttcaagctgcagccggacaaacccaacaaggagctggcggagctcgtc
atgtttttagctcaggtcagtcactgctacctgcagcagctgtccagcttcccccaggag
ctgtccgggttactactgagctaccacacagtcctgcagcctgacctacgaatgaccttc
tgcaaagccatgattcttctgaggaacaagaatctgatcgaccccacttgtctcctggag
ctcttctttgagctgctgcgatgtcacgacaagctgctgaggaagacactgtacacacac
attgttgttgatatcaaaaacatcaacgcaaagcacaaaaacaacaaggtcaacacaacg
ttacagaacttcatgtacaccatgctgagagacagtaatcccattgcagcgaagatctct
ttagatgtgatggcggagctttacaaaagaaacatatggaatgatgcgaaaacagttaac
gtcattacaacggcatgtttctgcaaagtgacaaagatcgttgtcgcaggtcttaaattc
ttcctgggcaaagatgaagatgaaaagaacgacagcgattcagactcagagccagaggga
ccgacaacccgagatgtgatggtgaaatactccacaggcaggaaaacctccaaaaacaag
aagaagatggaaaaagcaatgaaagttctcaagaaacacaagaaaaaggctaaagtagag
gtgttcaacttttctgctattcacctgattcatgatcctcaagatttctcagagaaactc
ttgaaacagttggaaagctctaaggagcgcttcgaggtgaagatcatgatgatggagctc
atatccagactggttggaatccatgagctcttcctctttaatttctatcccttcgtccag
aggtttcttcagcctcatcaaagagaagtgacaaagattctgctgtgtgctgcccaggcg
tctcaccagctcgttcctcctgaggtcattgaacctgtcatcatgaccatcgcaaataac
tttgtgacagacagaaactctggggaggtcatgactgtgggtattaatgccatcaaggaa
ctgacagctcgttgtcccctcgccatcaatgaagatctgctgcaggacctggctctgtac
aagaaccacaaagacaagaatgtgatgatgtctgcacggggactgatccagctcttcagg
aatctggatccacatatgttgctgaagaaagacagggggagacccacagaggcgtcaaca
gaggctaaaatcagagactacggagaacttgaatctaaagactacatccctggagctgaa
gtcctggaggtggagggggaggcgaagaaagagggagaggaggacggagaaggctgggag
agtgccagtataggtgatgaggatgaagacggggagtgggtggacgttcaccactcggct
gatgaagacgcaggagaaatggcggagaagcttcagagtattccggtggaggaaagaaag
gcgaaggcagctgcggtcagtggcagcaggctcctcacgcaggatgagttcaagaagatc
cgtctggtgcagatggccaaggaggtgaacaacgcgccgggcaagggccagaagaggaag
atcgtgacgagtgacgatgaagaggacaacagaggggagctgctgactttgagaaacatc
gagaaactgcataaaaaaccaaaatcagacaaggaaacacgtctggcaacagcaatggag
ggacgaagcgaccggaaggattttgtgaggaagcattccaaactgaacccacacgccagc
accagcaacaaggagaagaggaagaacaagaacttcatgatgatgagacacagtcagaac
gttaggaccaagggcaaacgctccttcagagaccgacagatcgctctacgagatgctctc
ctgaagaggaagaagcagcaccattag
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