Hippoglossus hippoglossus (Atlantic halibut): 117771857
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Entry
117771857 CDS
T07778
Name
(RefSeq) calponin homology domain-containing protein DDB_G0272472-like isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117771857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117771857
Membrane trafficking [BR:
hhip04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
117771857
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
C2
Motif
Other DBs
NCBI-GeneID:
117771857
NCBI-ProteinID:
XP_034458573
LinkDB
All DBs
Position
12:12470301..12484131
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AA seq
1309 aa
AA seq
DB search
MSLADLQWCPTSVQVTVLQARGLRVKGKGGTNDAYAVMHLGKEKYQTSVVEKSIAPVWRE
EAAFDLPPLLLLHQGGGGGAGGAGERGTLRVHVLHRALVGPDKQLGQAVINLLQLSDDKT
RSKTEWFKLLDKTGKADKDRGEVLVDIQFMRNNMTASMFDLSAAGKSRSRLGKFKDKVRG
KKKESDAASGLVPSFSHVLTDSEGEAIGDEEVAVGKDEKKKKPKMKSLFSSKSNLQKNMS
QSMSVLPVKNSSLSGSQSSGLNMDSSEGKKKFRFKIHKRSGSSDGKDSSSSHHKHGAAEQ
SNLCINGSHVYREEQQTRTSRIGSNFSLASSGHGSMEDVPESSPPSVESLQAGRQYSPWT
EEEEEEDTAEVENLTEDTEEHRKDEEEITRMEEERRRRKEDEDERKQEEALERLAEQKRR
QDEEERKRIEEEKVRQEEEERLRSQEEALERLAEEKRQEEERKRIEEEKVRREEEQRLRS
QEEALERLAEEKRRQEEERKRIEEKVRREEELMILRKRQEQEEQVRREEQERERLAEEKK
RREEQGRKRIEEEERVQEDRMRQEEEERITRQEEECRLAEEKRRMEEERMIEEEKVRKAE
ERRRKEEEQMRRQEVEDCEAKRKLQDQERKQQEEEERIRKEEERRRVEEERARKEKEEYE
RLAEERRKLGQKERERMEDEERIKREKDERMRMEEEEAERVRRKVEEKRRLEEQERRIIE
EEEKRQREEGERIMKEDRARKEKEEYEKLVEEKRKLEEQERRQKEEEERIRHKEEEKIRI
EEERRRREEAKKEEMERLAEEKKRLEEQEKRRIEEEGKSQREEEDRKRRLEEAGREKREE
EARKLETEKLTEVQKKKENTTKDGHKAAGKKPKVAEESPAGVTCTNPFDETVSNNPFEDV
PDSPAAPDSRASQVSKVKQGYPSAVSSVGSGTRSTDQKDLIGAQRDKRPAPQPPRGNIAE
SQREQDVSKPHQAQTNKQSNDKDVKTASVLPQRSVQVIAPLSQSRTDTKNPQGSMQSSDA
KGAGGVAKNSKRPAPSRPSLEEELSSKPKSLSVSQGGGSEIKQAPIIYSSNPFEDDEDEP
TAQDTPTPSSVHWPPAASEDAASQAKLKSSKMAHAPPPPPTSSTLGKQNTDGGHVTDAAG
VAAPDKAAKQTRAPQPEVMISAAVQDTSLKEPEPARAQSTAEVTGVKKEGPPTTSRRLQP
VKPLNPQEQKSAPVVQSEKNNNSTEIEKKREVQDKTKILSQVNDSGPKGPYTQLTQKELI
SLVLKQEKQLSERDKTIAELELYIDNLLVRVIEESPSILMSLNSLKKTV
NT seq
3930 nt
NT seq
+upstream
nt +downstream
nt
atgtccctggcggatctgcagtggtgtcccacaagcgtccaggtaacggtgctccaagcc
cgaggcctcagggtgaaggggaaaggcggcaccaacgatgcgtacgcggtcatgcacctg
ggcaaggagaagtaccagacctcggtggtggagaagagtatcgctccggtgtggagggag
gaggccgcgttcgacctgccgccgctgctgctgcttcaccagggaggaggtggaggagct
ggaggagcaggagagcgcggcacgttgcgcgtccacgtcctgcaccgggccctggtgggt
ccggacaaacagctgggacaggctgtcatcaacctgctgcagctcagtgacgacaaaacc
cgcagcaagaccgaatggtttaagttgctggataagacgggcaaggcggacaaagacaga
ggagaggttcttgtggacatccagttcatgaggaacaacatgaccgccagcatgttcgac
ctctctgctgcaggaaagtcccggtcccgactgggcaagttcaaggacaaagttcgcggc
aagaagaaggaatcggacgctgcgtctggcctggtgccatccttcagtcatgttctgacg
gacagcgagggggaggcaatcggagacgaggaggtggctgtggggaaggatgagaagaag
aagaaacctaaaatgaagtctttgttttcttccaagtccaacctgcagaagaacatgtct
cagtccatgtctgttctgcccgtgaagaactcgtcgctaagcggcagccaatcgtctgga
ctgaatatggattcctccgagggtaaaaagaagttcaggttcaagattcacaaacgctca
ggcagctcagacggcaaagattcctcctctagtcaccataaacatggcgctgcagaacag
agtaacttgtgcattaatggcagccatgtttaccgtgaagagcaacagactcgaacctct
cgcatcgggtcaaacttcagtctggccagttcaggccatggatccatggaggacgtccct
gaaagctcccctccgtctgtggagtcacttcaggcagggaggcaatattccccctggaca
gaagaggaggaagaggaggatacggctgaagtagaaaatttaacagaggacacagaggaa
catagaaaggatgaagaggaaataacaaggatggaggaggagaggaggaggagaaaagaa
gatgaagatgagaggaaacaagaagaagctcttgagagactggctgagcagaaaaggaga
caagatgaggaagaaagaaaacggattgaagaagagaaggtgagacaagaggaagaggag
aggttgaggagccaagaagaagctcttgagaggttggctgaggagaagagacaagaggaa
gaaagaaaaaggattgaagaagagaaggttagacgagaggaagagcagaggttgaggagc
caagaagaagctcttgagaggttggctgaggagaagcggagacaagaggaagaaagaaaa
aggattgaagagaaagttagacgggaggaagagctaatgattttgaggaagagacaagaa
caggaggagcaggttaggagagaagaacaagagcgcgagagactagcagaggaaaagaag
agacgagaggaacaaggaagaaagagaattgaggaggaagagagggtccaggaagacagg
atgagacaagaggaagaggagaggatcacgagacaagaggaagagtgtaggttagccgag
gaaaagaggagaatggaagaagaaagaatgattgaggaagagaaagttagaaaggcggaa
gagaggaggagaaaagaggaagaacaaatgagaagacaggaggtagaagactgtgaggca
aagaggaaactacaggatcaagaaaggaagcaacaggaggaagaggaaaggattaggaaa
gaggaggagaggcgacgggtggaagaggagagggctaggaaagaaaaggaagaatatgag
agattggcagaggaaagaaggaaactagggcagaaagaaagggaaaggatggaggatgaa
gagagaattaaaagggagaaagacgaaaggatgaggatggaggaagaggaagcagagagg
gttaggaggaaagtcgaggagaagaggagactggaggaacaggagaggaggataattgag
gaagaagaaaaaaggcaaagggaagaaggagagagaattatgaaagaggatagggctagg
aaagaaaaggaagaatatgagaaattggtagaagaaaagaggaaactggaggaacaagag
agaagacagaaagaggaagaggagagaattagacacaaagaggaagaaaagattaggatt
gaggaggagaggaggagaagagaagaggctaaaaaggaagaaatggaaagattggcagag
gaaaagaagagactagaggaacaagagaagaggaggattgaagaggaagggaaaagtcaa
agggaggaagaggataggaagaggaggctggaggaagctgggagggagaaaagagaggaa
gaggccagaaagctggagacggaaaagttaacagaagtacagaagaaaaaagaaaataca
accaaggacggacacaaagctgctgggaagaaacccaaagtggcagaggagagtccagca
ggagtcacctgcactaatccgtttgatgagaccgtctctaataatcccttcgaggacgtc
cccgactcacctgctgctcccgacagccgcgcctcccaagtgtcaaaggtcaaacaagga
tatccatctgctgtgtcatcagtgggaagcgggactcgttccactgatcaaaaggacctg
attggagctcagcgggacaagcgaccggctcctcagcctccaagagggaatatagctgag
agtcagagggagcaagatgtctcgaaaccacatcaggcacaaacgaacaagcagagtaat
gacaaagacgtcaaaactgccagtgtgctccctcagcgttcggtgcaagtaatcgctccc
ctgagtcaatcccgaacagatacgaagaacccccagggctcgatgcaaagtagtgacgcc
aaaggagcaggaggtgtggccaaaaacagtaaacgccctgcaccatctagaccttcactg
gaagaggagctgtcgtctaaacctaaaagcctctctgtttcccaaggaggtggctcagag
ataaaacaagcccctatcatttatagctcaaatccctttgaagacgacgaagatgagccc
acagcacaagatacaccaacccccagttcagtacactggcctccagctgcgtccgaagat
gccgcctctcaagcaaaactcaaatcctccaaaatggcccatgctcctccacctcctccc
acatcaagcactttaggaaaacaaaacaccgacggaggccacgttacggacgctgccggt
gtcgctgcaccagataaagctgcaaagcaaacgcgtgccccacagccagaggtcatgatc
tctgctgccgtccaggacacgtcactaaaagagccggagcctgcgagagcacagagcact
gcagaggtgacgggtgtgaaaaaggaagggcctcctacgacgtcacgcaggcttcagccg
gtaaaacctcttaatcctcaggaacagaaatccgcccccgttgttcagtcggagaaaaat
aacaactccacagaaattgagaagaaaagagaagttcaggataaaacaaagattctctcg
caggtaaatgacagcgggcccaaaggaccgtacacccagctgactcaaaaggaactcatc
tctctggtgctgaaacaggagaagcagctttccgagagagacaaaacgatagcagagctg
gagctgtacatcgacaacttactcgtgcgcgtcatagaagagagccccagcatcctgatg
tcattgaactctctgaagaaaacggtgtag
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integrated database retrieval system
