Hippoglossus hippoglossus (Atlantic halibut): 117771876
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Entry
117771876 CDS
T07778
Symbol
samd1b
Name
(RefSeq) LOW QUALITY PROTEIN: atherin
KO
K26266
sterile alpha motif domain-containing protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117771876 (samd1b)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Other PRC associated proteins
117771876 (samd1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAMD1_SHD
SAMD1_WH
SAM_1
SAM_2
SAM_PNT
DUF4777
Motif
Other DBs
NCBI-GeneID:
117771876
NCBI-ProteinID:
XP_034458611
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All DBs
Position
1:10018918..10028733
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AA seq
685 aa
AA seq
DB search
MSEPNKYREWILETIDSLRSRKARPDLERICRMVRRRHGSDPDRTRTELEKLIQEQTVLK
VSYKGSISYRNAAKVQRKSRKKSEFITAAVGGGGAEAAARERTKHDHLNNNGDSAHSFTD
QEEGEEPEPSPDPHTQTSGTKLKPASSRSSGNGCLNCGATTGCAVGSGCKEEKASAPRDK
GLEHQAAGGCPEPGVGHGTSAHGDGSRATPSRSDAVCGGMEPGPSGAESQNKTYTGSVGS
LPQQQQRQPAPLKPKLRVGGGGTRAAGTHANSSDLGDRLVASVRRLSERSHRGGSAAAAS
STATTRGHMKPLGLKEILGYLSSQEQLSEEKLTRGKVKVVMEREVARGRLRRTRCGNITL
PLRGMVMVEEPASKKNASADRLGKSALQEKHTPTKKPPPSSPVQEMRPMETSSEEVERGE
NEEEEEEEDADDPGVSDEEGGPSPVAMTTETGLTEKPAEDAEIQAVSKEGSPHQQQQHSG
KGVCTCVCMNMCAEYKRLSQGWIPLARTPSPPVQGVVEVLQCNGARLEERAYLPDQPHMA
AQTQSQPQHDGINHTSSGFNNMECMTEVGVSSCLLTPTASPRDSGLSEELGINGGVSSGG
FMKCEGASGSPVDWTVSDVVSYFTAAGFPEQAAAFMTQEIDGKSLLLMQRNDVLTGLSIR
LGPALKIYERHVKVLQKTHFEDDDC
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagcccaataagtaccgagagtggatcctggaaacaatcgactccctccgctcc
aggaaagcgcgtccagacctggagaggatctgtcgaatggtccggagacgacacgggtca
gacccggaccgaaccaggacagagctggaaaaactgatccaagagcagacggtgctcaaa
gttagctacaagggctccatatcgtaccggaacgcggccaaggtgcagaggaaaagccga
aagaagagtgagtttatcacggcggctgttggcggtggcggcgcggaggcagcagcgagg
gagcggaccaaacacgaccatctgaacaacaacggcgacagtgcgcacagcttcaccgac
caggaggagggagaggagccggagcccagcccagatccccacacccagacatcaggcacg
aagctcaagcctgcctccagccgaagtagcggaaacgggtgcctcaactgtggcgcaaca
acgggctgcgctgtcgggagcggctgcaaagaagagaaagcaagtgcaccgagagacaag
ggattagaacatcaggcagcggggggctgcccggagcccggtgtcggccacggaacgagc
gcgcacggcgacggcagcagggcgacgccgagcaggagcgatgctgtctgcggaggaatg
gagccgggtccgtccggagctgagagccagaacaaaacttacaccgggagcgtcggcagc
ctcccgcaacaacaacagaggcagcccgcgcccctcaagcccaaacttcgagtcggagga
gggggcacccgagcggcggggacccacgccaactcctccgacctgggcgacaggctggtg
gcttctgttcgccgcctgtccgagaggagccaccgagggggctccgccgctgccgcctct
tccaccgccacgaccagaggccacatgaagccgctcggactcaaggagatcctgggctac
ctgagcagccaggagcagctgtcggaggagaagctgacccgaggcaaagtcaaggtggtc
atggagcgagaggtggcgagaggccggctgcgcaggacccgctgcgggaacatcactctt
cccctgagggggatggtgatggtggaggagccggcgtcgaagaagaatgcgtccgcggac
agacttgggaagagcgcactgcaggagaagcacacaccgacgaagaagccgccgccctcg
tctcctgtccaggagatgaggccaatggaaacaagcagcgaagaagtggaacggggagag
aacgaggaagaggaggaggaggaggacgctgatgatcccggagtttcggatgaagaggga
ggaccatcgcctgtagccatgacaaccgaaacagggctcacggagaagcccgcagaagat
gctgagatccaggcagtgtcaaaggaggggagcccccatcagcagcaacagcacagtggc
aaaggtgtgtgcacgtgcgtgtgcatgaatatgtgtgctgagtacaaacggctctctcag
gggtggattcccctcgccaggacaccgtccccacctgttcagggagttgtcgaggtgttg
cagtgtaacggtgcacgcttggaggagagagcttacctcccagatcagccgcatatggca
gcacaaacacagagccagccgcagcatgatgggatcaaccacacctcctcaggcttcaac
aacatggagtgtatgacagaggtcggtgtgtcgtcctgcctgctcacacccaccgcctcc
ccgagagactcaggcctgtctgaggagctagggataaatggaggtgttagcagtggaggg
ttcatgaagtgtgagggggccagtggaagcccggtggactggacggtgtctgatgtggtc
agctatttcacagcagcaggtttccctgagcaggctgctgccttcatgacccaggaaatc
gatggcaagtctctgctcctcatgcagcgcaatgatgttttgactggcctgtcaatcagg
ctcggccctgccctcaagatctatgagcggcatgtgaaggttctgcagaaaacacacttt
gaggacgacgactgctaa
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