KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117771923
Entry
117771923         CDS       T07778                                 
Symbol
cdk9
Name
(RefSeq) cyclin-dependent kinase 9
  KO
K02211  cyclin-dependent kinase 9 [EC:2.7.11.22 2.7.11.23]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    117771923 (cdk9)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:hhip01001]
    117771923 (cdk9)
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hhip03021]
    117771923 (cdk9)
Enzymes [BR:hhip01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.11  Protein-serine/threonine kinases
    2.7.11.22  cyclin-dependent kinase
     117771923 (cdk9)
    2.7.11.23  [RNA-polymerase]-subunit kinase
     117771923 (cdk9)
Protein kinases [BR:hhip01001]
 Serine/threonine kinases: CMGC group
  CDK family
   117771923 (cdk9)
Transcription machinery [BR:hhip03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     117771923 (cdk9)
    Brd4/P-TEFb complex
     117771923 (cdk9)
    7SK RNP complex
     117771923 (cdk9)
SSDB
Motif
Pfam: Pkinase PK_Tyr_Ser-Thr Haspin_kinase ABC1 Kinase-like Pkinase_fungal RIO1
Other DBs
NCBI-GeneID: 117771923
NCBI-ProteinID: XP_034458728
LinkDB
Position
12:1215447..1221753
AA seq 392 aa
MQRERTTNATTAEKPDREAAIMSKYYDGVEFPFCDEFSKYEKMAKIGQGTFGEVFKAKHR
QTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATQFNRYKGSI
YLVFDFCEHDLAGLLSNANVKFTLAEIKKVMQMLLNGLYYIHRNKILHRDMKAANVLITR
DGVLKLADFGLARAFSLAKNSQGNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIM
AEMWTRSPIMQGNTEQHQLTLISQLCGSITAEVWPGVDKYELYQKMELPKGQKRKVKDRL
KAYVKDPYALDLIDKLLVLDPAQRTDSDDALNHDFFWSDPMPSDLKNMLSTHNTSMFEYL
APPRRRGHMPQQPPNQNRNPATTSQTEFDRVF
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgcagcgagagaggacgaccaacgccactacggctgaaaagcccgaccgggaggccgcc
atcatgtccaaatactacgatggagtggagtttcctttttgcgacgagttctccaaatat
gaaaaaatggccaaaataggacaggggacctttggggaggtgttcaaagcaaagcacaga
cagactgggaagaaggtcgcgctgaagaaggttttgatggaaaatgagaaagaaggattt
ccaatcacagcattgagagaaatcaagatccttcagctgctcaaacacgagaatgtggtc
aatctgatagagatctgcagaaccaaagctacacagttcaacagatacaaaggcagcatc
tacttggtgtttgacttctgtgagcatgacctggccgggctgctgagtaacgccaatgtt
aagttcaccctggcagagatcaaaaaggtcatgcagatgctgcttaacggactgtactac
atccacagaaataagatcctccacagagacatgaaggctgccaatgtgctcatcaccaga
gatggcgttctgaaactggccgactttggattggcccgagccttcagcctggctaaaaac
agccagggcaaccgctacaccaaccgtgtcgtgacactctggtaccgacctccagagctg
ctgttaggtgagcgggactacggacctcccattgacctatggggagcaggctgcatcatg
gcagagatgtggaccaggagtccgatcatgcagggcaacacagagcagcaccagctcact
ctgatcagccagctttgtggctccataactgctgaggtgtggcctggtgtggataagtac
gagctgtaccagaagatggagctgcctaaaggccagaagaggaaagtgaaggatcgcctc
aaagcctacgtcaaagacccttacgcactggacctgatagacaagctcctggtccttgac
ccggcacagcgcacagacagtgacgacgcgctcaaccacgacttcttctggtctgaccca
atgccgtcagacctgaagaacatgctctccacccacaacacctccatgtttgaatatctg
gccccaccccgacggagaggccacatgccccagcagccgcccaatcagaacagaaaccca
gcgaccaccagtcagaccgagtttgatcgagtgttttag

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