Hippoglossus hippoglossus (Atlantic halibut): 117771931
Help
Entry
117771931 CDS
T07778
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
117771931 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117771931 (xrcc4)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
117771931 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4_CC
XRCC4
XRCC4_C
HAP1_N
PH_4
ZapB
XLF
bZIP_2
CC_CEP250
Hormone_1
Motif
Other DBs
NCBI-GeneID:
117771931
NCBI-ProteinID:
XP_034458738
LinkDB
All DBs
Position
12:1439186..1469886
Genome browser
AA seq
336 aa
AA seq
DB search
MHTSVREIDVSSQPDSTYFLRVDWRGQSLGSGFQLVLTDGQGAWRGEVRDAALCEEAKEL
EMQKERYIQDLQQALTGTESSITYSFTLTPSPPNHSSTVTLAYEKVQKDISFRLGSVLLK
SVAEPAEAVRELLIHSLQKGNTLDHQNQDLEEENRKLRQEQQRITADMKRYVGGKEALET
ELYSRFVLVLNEKKAKIRSLQETVSQLQESSSEGEKNKDSVKSHQTAAEEDEYGGSTDEE
PEDVKCTAASTLQSRDSSTPSPLDGSLKDITDVAPCRKRRFRHLKASDPALKRPNQQTSH
RKRSDSPAGSSKQQTPQRSSDAATASSAAEDLFEDF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgcacacctcagtgcgtgaaattgatgtctcctctcagcctgactccacctacttcctg
cgggtggactggagggggcagagcctaggttcaggcttccagttggtgctaactgatgga
cagggagcatggagaggagaagtgagggacgcagcgctgtgtgaggaggcgaaggagctg
gagatgcagaaggagaggtacatccaggacctccagcaagcactgactgggacagagagc
tccatcacctacagcttcaccctgacgccgtctccaccaaaccacagctccacggttaca
ctggcatatgagaaggtgcagaaagacatctcattcaggctgggttctgttttgttgaag
tctgtcgcagagccagcggaggctgtgagggagttactgattcacagtctgcagaaggga
aatacactggaccaccagaaccaggatctagaggaggagaaccggaaactaagacaagaa
cagcaacgcatcactgcagacatgaagcgatacgttggtggtaaagaagccctggagaca
gagctctactctcgatttgtcctcgtcttgaatgagaagaaggcaaagatccgcagtctg
caggaaactgtctcacaactgcaggaatccagttctgagggagagaaaaataaggattca
gtaaaatcccaccaaacagcagcagaggaggatgaatatggagggagcactgacgaggag
ccagaggacgtgaagtgcacggcagcctccactttacaatcccgggactcctctacacca
agcccactggatggcagcctaaaggacatcacagacgtggccccctgtcgcaaacggcgg
tttcgtcacctcaaggcctcggacccggcacttaaaagaccaaaccaacagacttcccat
cgaaagaggagtgactcccctgcaggatccagtaagcagcagactccccagcgctcttca
gatgctgcgacagcaagttcagcagcagaggacctgtttgaggatttttga
DBGET
integrated database retrieval system
