Hippoglossus hippoglossus (Atlantic halibut): 117772012
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Entry
117772012 CDS
T07778
Symbol
rad23b
Name
(RefSeq) UV excision repair protein RAD23 homolog B
KO
K10839
UV excision repair protein RAD23
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03420
Nucleotide excision repair
hhip04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
117772012 (rad23b)
09124 Replication and repair
03420 Nucleotide excision repair
117772012 (rad23b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
hhip03051
]
117772012 (rad23b)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117772012 (rad23b)
Proteasome [BR:
hhip03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
117772012 (rad23b)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
117772012 (rad23b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Crinkler
Rad60-SLD_2
UBA_3
Dsc3_N
Metal_resist
OTU1_UBXL
CUE
EAD1
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
117772012
NCBI-ProteinID:
XP_034458816
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All DBs
Position
12:complement(9296446..9303676)
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AA seq
386 aa
AA seq
DB search
MLITLKTLQQLTFKIDIDEEETVKTLKERIEQEKGKEIFSIAGQKLIYAGKILNDDTALK
EYKIDEKNFVVIMVTKPKTASATPQPSPSPSTSAPTSTAPAAPAASSSVSENTIERSSTD
EKPEERRSSTAEPASSPVGSSEASTNTNLLNEAVSNLVTGPSYDAMVNEMMLMGYEREKV
VAALRASFNNPDRAVEYLLTGIPGRDQGNVTGSDAVVPPVSGISAASTGGIIVPANTGSS
GAGANPLSFLRSQPQFHVMRQLIQQNAALLPALLQEIGRENPELLQEISSHQEQFIQMLN
EPNPEAVPVSGEGGSGGGSGGAGGMGVSSPGGSHTSYIQVTPQEKEAIERLKALGFPEGL
VIQAYFACEKNEDLAANFLLQQTFDD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgttgataactttgaaaaccctacaacagctgacgtttaaaatcgacatcgacgaggag
gagacggtgaagactttaaaagagaggatcgaacaggagaagggaaaggaaatattttcc
attgctggacagaagctgatctatgccggtaaaatcctcaacgatgacacggccctcaag
gagtataaaatcgatgagaagaactttgtggtcatcatggtgacaaagcctaaaacagcc
tcggccaccccacagccttcaccctcgccttccacttcagctcccacctccacagctccc
gcagcacctgctgcctcttcgtctgtctcggaaaacacgatcgagcgctcctctacagat
gagaaaccagaggagaggcggtcctccactgctgaaccggcttcctccccagtcggaagc
tctgaggcatcaacaaacacaaacctacttaatgaggccgtttcaaatctagtaactggc
ccgtcatatgatgccatggtgaacgagatgatgctcatgggctacgagagggagaaggtg
gtggcagctctgagagcgagcttcaacaacccagacagagctgtggagtacctgcttacc
gggatcccgggcagggatcagggcaatgtgaccggttctgatgcggtggtgcctccagtg
agcggaatttcagctgcatcgacaggcggtattatcgtcccagccaacactggctcttca
ggtgctggagccaatcccctgagtttcctgagaagtcagccccagtttcatgtgatgcga
cagctgatccaacagaacgccgccctgctcccggctctgctgcaggagatcggcagagaa
aaccccgagctgttgcaggagatcagcagccaccaagagcaattcatccagatgctgaat
gagcccaatccagaggctgtgccagtcagtggcgaaggtggatccggaggtggatctgga
ggagccggaggaatgggggttagctcacctggcggaagtcacaccagctacattcaggtc
acgccgcaggagaaggaggccatcgagaggctaaaagccttaggatttccagaaggactt
gttatacaagcgtactttgcttgtgagaagaacgaggacttggccgccaacttcctttta
caacagacctttgatgattga
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