Hippoglossus hippoglossus (Atlantic halibut): 117772080
Help
Entry
117772080 CDS
T07778
Symbol
csgalnact1a
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
hhip01100
Metabolic pathways
Module
hhip_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
117772080 (csgalnact1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
hhip01003
]
117772080 (csgalnact1a)
Enzymes [BR:
hhip01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
117772080 (csgalnact1a)
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
117772080 (csgalnact1a)
Glycosyltransferases [BR:
hhip01003
]
Glycan extension
O-Glycan
117772080 (csgalnact1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
Sec8_N
ATG14
PEP-utilisers_N
DUF4140
Csm1_N
Motif
Other DBs
NCBI-GeneID:
117772080
NCBI-ProteinID:
XP_034458911
LinkDB
All DBs
Position
12:complement(8049914..8086412)
Genome browser
AA seq
592 aa
AA seq
DB search
MLHTAMLRRGLLTWVSRVGGALVLLCCSLSLLYVMTCSPPHSDDPPLSHALPRAGSNHPS
LGGTGPGVGAGAGGTGGAGVGPAQSGGSAGVQSYQVLLQEREEQHRHHISSLKKEIAQLK
EALQERSQQLKGVQESLKRGGPAEGPETGVGSQAGGLVETQGAKSQQADLQDFLRSQLSK
AEVTAGIRLPSEYAVVPFESFTLQRVYQLEMGLTRHPEEKPVRKDKREELGDVLETALHS
LNAPPSQDSRGAAEKTQSSKVYAPSDFIEGITRTERDKGTLYELTFRGESSNEFRRLVLF
RPFGPLMKVKNERVDTSNIPINIVVPLSRRTDKFKQFMQNFREVCVRQDGRVHLTVVYFG
KEQMSEVRSTLENTSREVNFKNFTLLQLDEEFSRGRGLDVGARAWKGGNVLLFFCDVDIY
FTADFLNSCRLNTQPGKKVFYPVLFSQYNPTLIYGSPEHIPTVEQQLVIKKDTGFWRDFG
FGMTCQYRSDFINIGGFDIDIKGWGGEDVHLYRKYLHSNLLVVRAPSRGLFHLWHEKQCA
DELPPDQYRMCMQSKAMNEASHGQLGMLFFRHEIEAHLRKQKQQQNSNPKKT
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgctacatacagctatgttgcggcgtggacttttaacctgggtctcccgtgttgggggc
gcgctggtgctcctctgctgctccctgtcactgctctacgtgatgacctgcagcccccca
cactccgatgacccgccgctgagtcatgcgttaccccgcgctggatcaaatcaccccagc
ctggggggcacaggaccgggagtgggagcgggggccggtgggacaggaggagccggagtt
gggcctgctcaaagcggaggatcagcgggtgtccagtcgtaccaggtgctcctccaagag
cgtgaggagcagcaccgacaccacatctcctccttgaagaaagagattgcacagctgaag
gaggctttgcaggagcgcagccagcagctgaaaggagtgcaggagagcctgaagagagga
ggccccgcagagggaccggaaactggggtcgggtcccaggcaggcggcctcgtagagact
caaggagccaagagccagcaggccgatctccaggacttcctgaggagccagctctcaaag
gctgaggtgactgccggcatcaggctgcccagcgagtatgcggtggtgccatttgagagt
ttcacgctgcagagggtgtaccagctggagatgggcctgacgcgtcaccctgaggagaag
ccggtgaggaaggacaagagggaggagctgggggacgtgctggagacggccctgcacagc
ctcaacgcacccccatcccaggacagcaggggcgcagcagagaagacgcaaagtagcaaa
gtttacgcaccatccgacttcatagaaggtatcactcgcacagagagggacaaagggacg
ctgtacgagctgaccttcagaggggagtcgagtaatgaattcagacgcttggtcctgttc
cgtccctttggaccgctgatgaaagtgaaaaacgagagggtggacacatcaaacatcccc
atcaacatcgtcgtcccgctgtcccggcgcacagacaagttcaaacagttcatgcagaac
ttcagggaggtgtgtgtgcggcaggacggccgagtccatctgacagtggtgtattttggg
aaggagcagatgagcgaagtccgcagcactctggagaacacgtccagggaggtgaacttt
aagaacttcactctgctgcagctggacgaggagttttctcggggtcgaggtctggacgtc
ggggcccgagcctggaagggaggcaacgtgctgctcttcttctgcgacgtggacatctac
ttcaccgccgacttcctcaacagctgccgactgaacacacaacccggtaaaaaggttttc
tacccagtgctattcagccagtacaaccccactctgatctatggaagccctgaacacatc
ccaactgtggagcagcaactggtgatcaagaaagacacggggttctggagggatttcggc
ttcggcatgacctgccagtaccgctccgacttcattaacataggaggttttgacatcgac
atcaaaggctggggaggtgaggacgtccacctctacaggaagtacctccacagcaacctc
ctcgtggtgcgggcgccgtcacgaggcctgttccacctgtggcacgagaagcagtgcgcc
gatgagctcccgccggaccagtaccgcatgtgcatgcagtccaaggccatgaacgaggcc
tcgcacggccagctggggatgctgttcttcaggcacgagatcgaggcgcacctccgcaaa
cagaagcagcagcagaactcaaaccccaagaagacatga
DBGET
integrated database retrieval system
