KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117772094
Entry
117772094         CDS       T07778                                 
Symbol
pus1
Name
(RefSeq) tRNA pseudouridine synthase A
  KO
K06173  tRNA pseudouridine38-40 synthase [EC:5.4.99.12]
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hhip03016]
    117772094 (pus1)
Enzymes [BR:hhip01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.12  tRNA pseudouridine38-40 synthase
     117772094 (pus1)
Transfer RNA biogenesis [BR:hhip03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    117772094 (pus1)
 Prokaryotic type
    117772094 (pus1)
SSDB
Motif
Pfam: PseudoU_synth_1
Other DBs
NCBI-GeneID: 117772094
NCBI-ProteinID: XP_034458929
LinkDB
Position
12:14139115..14141579
AA seq 421 aa
MFTVRPAFSALVKHSQTIQTRGGFYNLCCTMTESPKDENTAKLLKRANEENEDSSERLQA
AKRLKTEGEQAEDEKKYPKKKVVLLLAYSGKGYYGMQRNPGTAEFKTIEGDLVTALVKSG
CIPENHGDDMKKMSFQRCARTDKGVSAAGQVVSLKLRLMDDVIEKINENLAKQIRVLGLK
RVTQGFNSKNNCDGRTYFYMLPTVAFAPKDSDTGNTAAFRLEPGKIQTVNRLFALYKGTH
NFHNFTSQKAPSDPSARRYITEMTCGEPFIRSDSEFAVITVRGQSFMMHQIRKMIGLVIA
IIKGYVNEEVIERSWGQEKVDVPKAPGLGLVLEKVHFDRYNKRFGGDGLHECLEWDREEE
LIKAFKEAHIYPTIVETEGQEGSMVNWMATLPIHDFDGTASGAQDTKDQKQDNADEENDT
D
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtttacagtccgacccgcgttcagtgccttagttaaacactcacagacgatacagaca
agaggtggcttttataatctctgctgcacgatgactgaatcaccaaaagacgaaaacaca
gccaagctgctgaaaagagccaacgaggaaaatgaagactcgtctgagaggctacaggct
gcaaagagattgaaaacagagggggagcaggctgaagacgagaagaaatatcctaaaaag
aaagtggtgcttctcttggcctactctggaaagggctattatggcatgcagaggaatcct
ggaaccgctgagttcaagaccattgaaggggatctggtcaccgctcttgttaaatctggc
tgcattcctgaaaaccacggtgatgacatgaagaagatgtctttccaaagatgtgccaga
actgataagggtgtgtccgctgccggccaagttgtgtcgctaaagctgcggctgatggac
gacgtgattgaaaaaatcaacgagaatctggcaaagcagatcagagttctaggtcttaaa
cgggtgacccagggtttcaattccaaaaacaactgtgatggtcgtacttacttctacatg
cttccaactgtggcctttgccccgaaagactctgacacagggaacacagcagcctttcgc
ctagaaccagggaaaattcagacggtgaaccgtctgtttgctctgtacaaaggcacccac
aacttccacaacttcacctcccagaaggctcctagcgaccccagcgctcgccgctacatc
acagagatgacctgcggggagccgttcatccgcagcgactcagagttcgcagtgatcact
gtgcgaggccagagctttatgatgcaccaaatccgcaagatgatcggcctggtgattgcg
ataataaagggctacgtgaatgaggaggtgatagagcggagctggggacaggagaaggtg
gatgtgcccaaagctcccggactggggctggtgctagagaaggttcactttgaccgctac
aacaaacgcttcggaggggacgggctgcacgagtgcttagaatgggaccgcgaggaggag
ctaatcaaggcttttaaggaggctcacatctaccccaccattgttgagacggagggtcag
gagggctccatggtcaactggatggccacacttcctatccacgactttgacgggacggct
agtggagctcaagacactaaggaccagaaacaggacaatgcagatgaagaaaatgacaca
gattag

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