Hippoglossus hippoglossus (Atlantic halibut): 117772151
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Entry
117772151 CDS
T07778
Symbol
sbno1
Name
(RefSeq) LOW QUALITY PROTEIN: protein strawberry notch homolog 1
KO
K26273
protein strawberry notch
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117772151 (sbno1)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
117772151 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
BUD22
Helicase_C
PLAC9
Motif
Other DBs
NCBI-GeneID:
117772151
NCBI-ProteinID:
XP_034458990
LinkDB
All DBs
Position
12:2989735..3006423
Genome browser
AA seq
1404 aa
AA seq
DB search
MDPGQDLLLAALSESGICPNDIGLFDVDSQDVAQPSTTQQSISISALDVGVGTEAVEFVR
AEPQAPVPIVTIRHKPQPSTTTFVLNQLNQLPSLGATGTKQSVSNPIKHTITVTKVVHVA
NSALRGSSLPSLTTVNPSVSRVVPSNRDQQIQLKDLLRTGHVKSTGLKGNSLMELMRLKP
PPNIAPPVASATGPGEINNGIKKEVMGRDAARIWISDDTKVHNFSHSQKPPGMREEDEPE
EEEEDELGHAETYAEYMPMKLRIGLRHPDPVVETSSLSSVSPPEVWYRLSIPEETIDRGC
LSALQLEAITYAAQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENYLLGRKRSLWF
SVSNDLKYDAERDLKDIGAKSIQVHSLNKFKYGKISSKHNGSVKKGVIFATYSSLIGESQ
SGGKYKTRFQQLLHWCGEDFDGVIVYDECHKAKNVCPIGSSKPTKTGLAVLELQNKLPKA
RVVYASATGASEPRNMAYMNRLGIWGHKTPFREFGNFIQAVERRGVGAMEIVAMDMKLRG
MYIARQLSFTGVTFKIEEVPLTQKYINMYNKSVRLWVSAREKFQQAANLMDAEQRMRKSM
WGQFWSAHQRFFKYLCIASKVRRVVQLAREEVQNGKCVVIGLQSTGEARTLEALEEGGGE
LNDFVSTAKGVLQSLIEKHFPAPDRQKLYSLLGIDLPTKKTPIPAVTAAEPEQKGKKRKG
SEVKQQQKKRHRKHGGLSGTSSEESQSEDSDGESGKDSDDSFKSISSADEDDDFNPFRDE
SDDDDEDDPWLIRKEPKKGKEKKKKKRKKSIDPDSIQSALLASGLGSTRPAFTASVNIPK
APATVKAETHQDTCLTSQDAVEHAQKMKKDLLEKLEELAEFLPPNTLDELIDELGGPENV
AEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNISIISEAASSGIS
LQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISELAGEQRFAS
IVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNXDSPLVPPPSNF
KGDFFKEIQGGLIGVGLINIEDRSGTLSLDKDYNNIGKFLNRILGMEVQQQNALFQYFSD
TLAAVIQEAKKNGRYDMGILDLGSGDEKVKKVDCRKFLTPGYTTSGHVELFTVSVERGMA
WEEATHAWADQSGPDDGFYVQMRNNKKTAILVKEVNSKKRLFLVYRPNTGRQLKLETYTD
IKKKFKKVLSEDAKQHWADQYKSSALICSHAYWRGNCKKASVGLQCEVGLRCRTYFVLCG
SVLSVWNELEEVLTPVSGTNVKVQIVRLRTEDGQRIVGLIIPANCVSPLINKLSTSDQCQ
QLAVQELQKRQQLHPQSLSQAPNT
NT seq
4215 nt
NT seq
+upstream
nt +downstream
nt
atggatcctggacaggatttacttctcgctgctctaagtgagagtggcatttgcccaaat
gatattggcctatttgatgttgattctcaggatgttgcgcagccctctacaacccagcaa
tctatctccatcagtgccctggatgttggagtggggacagaggcagtggaatttgttcga
gcagagcctcaagctccagtccctatagttactatcaggcacaaacctcagccatcaacc
accacgtttgtcttaaatcagctgaatcagttgccatcgctaggagctactgggaccaag
caatcagtttcaaacccaatcaaacatacaataactgtcaccaaggtggtccatgttgct
aattcagccctgcgaggttcatccctcccttccctcacaactgttaatccttcagtgtcc
agagtagtgccttctaacagagatcagcaaattcagttgaaagacctgcttaggaccggt
catgtgaagagcactggcttgaagggcaacagtctgatggagctgatgagactaaagccc
ccacctaacattgctccaccagtagcatcagccaccggtccaggtgaaattaacaatggg
atcaaaaaggaagtgatgggtagagatgctgccaggatctggattagtgatgacaccaaa
gtgcacaacttttcacattctcagaaacccccagggatgagagaagaggatgagcctgag
gaggaagaggaagatgaattgggtcatgcagaaacatatgcagagtacatgccaatgaaa
ttaagaattggcttgcggcatcccgatcctgtggtggagaccagttccttgtcgagtgtc
agccccccagaggtgtggtacaggctgtccatcccagaagaaaccattgatcgcggctgc
ctgtctgctctgcagcttgaagccatcacatatgcagctcagcaacacgagacattcctc
cctaatggtgaccgagctgcctatttgattggtgatggagctggtgttgggaaaggccgc
accattgcagggatcatctatgagaattaccttcttggccggaaaagatcactttggttt
agtgtctcaaatgacctgaagtacgacgctgagcgggacttgaaggatattggagcaaaa
agcattcaggttcattcactgaacaagttcaaatacggcaaaatctcctcaaaacacaat
gggagtgtgaagaaaggtgtgatctttgccacctactcatccttgataggagagagtcaa
tcaggaggcaaatacaagaccagatttcaacagcttctccactggtgtggggaggacttt
gatggagttattgtctatgacgagtgtcacaaagccaaaaatgtgtgtccaattggatcg
tccaaacctacaaaaactgggcttgcagtgttggaactgcagaacaaactccccaaggct
cgggttgtgtatgcaagtgctacaggtgcctctgaaccccggaacatggcctacatgaac
cgactgggcatctgggggcacaaaacacccttcagagaatttggcaactttatccaagct
gttgagcgcagaggcgttggtgccatggagatagtagctatggacatgaaactgaggggc
atgtacattgcaaggcagttgagttttacaggtgtgactttcaagattgaggaagttccc
ttgactcagaaatacatcaacatgtacaacaaatctgtgaggctgtgggtgagtgcacgt
gagaagttccagcaggctgccaatctgatggatgcagaacaacgcatgaggaagtccatg
tggggccagttctggtctgctcaccagcgattcttcaagtatctctgcatcgcatccaaa
gtccgcagagtggtgcagcttgccagagaggaggtccaaaatggaaagtgtgtggtgatt
ggtcttcagtccactggtgaagcaagaacactggaggccctggaggaaggaggaggagaa
ctcaatgactttgtgtcgactgcaaaaggagtgttgcagtccttgattgagaagcacttc
ccagctccagacagacagaagctttacagcctgctaggcattgacctcccaactaagaag
acccccattcctgctgtcactgcagcagaacctgaacagaagggcaagaaaagaaaaggt
tcagaggtcaagcagcagcagaagaagcggcatcgcaagcacggtggactgtcgggtacg
agttcggaggagagccagtctgaggattcggacggagagtctggtaaagacagcgatgac
agcttcaaatctatcagctcagcagatgaagacgatgatttcaacccattcagagacgag
tctgatgatgatgatgaagacgatccatggcttatcagaaaagaaccaaagaagggtaaa
gaaaagaagaagaaaaagagaaagaagagtattgatccagactccattcaaagtgccttg
ttagcctcggggctaggctccaccaggcctgctttcactgcctccgttaacatccccaaa
gcccctgccacagtcaaggcagagactcatcaggatacctgcctaacaagtcaggacgca
gtggaacatgcccagaaaatgaagaaagatctgctggaaaaacttgaggagctggcagag
tttctacctcccaacactctagatgagctcatcgatgaacttggtggacccgaaaatgtt
gctgagatgactggccgtaaaggtcgagtggtcagtaatgatgacggcagcatcagctac
gagtctcgctctgagctggatgtcccagtggaaatcctcaacctcacagagaagcagaga
ttcatggatggagagaagaacatatccatcatctcggaagctgccagctcaggtatttcc
ttgcaggctgatcgtcgagtgaagaaccagcggcggagagtccacatgacactagagctt
ccatggagcgcagacagagctatacagcagttcgggagaactcacaggtcaaaccaggtt
acagctccagaatatgtcttcctcatatcggagcttgcaggggagcagagatttgcatcc
attgttgccaaaagacttgaaagcctgggtgctctgacccacggagacagaagagcgaca
gaaacccgagatctcagcaggttcaattttgacaacaaatatggcagaaatgctctggaa
attgtgatgaagtcaattgtgaacntggattctccattagtccctccgccctctaacttt
aaaggggatttcttcaaagaaattcaaggtggactaataggtgtcggactcataaatatc
gaggacagatctggcacgctgtcacttgacaaagactacaacaacatcggcaagttcctg
aatcgtattttgggcatggaagtccagcagcagaacgccttgttccagtacttttctgac
acacttgcagcagtcattcaggaagccaagaagaacggcagatatgacatgggcattctc
gatctgggctctggcgatgagaaggtgaaaaaggttgactgcaggaaattcctaacacca
ggctacaccacatcaggacatgtggaactcttcacagtgagtgtggagaggggaatggca
tgggaagaagccacacatgcctgggcagatcagagtggtccagatgatggtttctatgta
cagatgaggaacaacaagaaaacggccatactggttaaagaggtgaacagtaagaagagg
ctgttcctggtttacaggccaaacaccggaagacaactcaaactggagacgtacacagac
atcaagaagaagtttaaaaaggtgttgtcagaagatgccaagcagcactgggctgaccag
tacaagtcgtctgcactaatctgctctcatgcatattggcgggggaactgtaagaaagca
tcagtgggcctacagtgtgaagttggtcttcggtgtaggacgtactttgtcctgtgcggc
tctgtgctcagtgtgtggaacgagctggaggaagtactaacccccgtcagtggaaccaat
gtaaaggtgcagattgttcgcctcagaacagaagatggacagaggatagttggactgatc
attccagcaaactgtgtgtctccattaattaacaagctgtcgacatcggaccagtgccag
cagctcgctgtgcaggagctgcagaagaggcagcagctccatcctcagagtctgagtcaa
gcacccaacacatag
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