Hippoglossus hippoglossus (Atlantic halibut): 117772159
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Entry
117772159 CDS
T07778
Name
(RefSeq) synaptic vesicle glycoprotein 2C-like
KO
K06258
MFS transporter, VNT family, synaptic vesicle glycoprotein 2
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
117772159
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117772159
Transporters [BR:
hhip02000
]
Major facilitator superfamily (MFS)
Protein transporters
Vesicular neurotransmitter transporter (VNT) [TC:
2.A.1.22
]
117772159
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MFS_1
LD_SV2
Sugar_tr
Pentapeptide_4
MFS_2
Pentapeptide_3
Pentapeptide
CcdA
Motif
Other DBs
NCBI-GeneID:
117772159
NCBI-ProteinID:
XP_034458999
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All DBs
Position
12:3606815..3647196
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AA seq
736 aa
AA seq
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MDETHNNRTSLVKGAKDIAKETKRHAAKNLSKAVDRASDEYSAQRSYNRFQNEDEEENNY
NTYTQQDGQYADNAANDEDGASSDATEGHDDEDEIYEGEYQGVPAYNDGKLREGQVALGQ
PVSDSQKSTKELENERQADEEELAQQYELIMQECGHGRFQWQLFFVLGLALMSDGVEVFV
VGFVLPSAETDMCVPNSGAGWLGSIVYLGMMFGAFFWGGLSDKLGRKQCLLISLSVNGFF
AFLSSFVQGYSMFLLCRMVSGFGIGGAVPIVFSYFAEVLAREKRGEHLSWLCMFWMIGGI
YASAMAWAIIPHYGWSFSMGSAYQFHSWRVFVVVCALPCVSAVVALTFMPESPRFYLEMG
KHDEAWMVLKQIHDTNMRARGEPERVFTVNRIKIPKQLDELVEMQNESANPVLKVLFKIK
TELRGIWLTFMRCFNYPVRDNTIKLAAVWFTLSFGYYGLSVWFPDVIKHLQADEYASRVK
VHNNERIEDFTFNFTLENQIHRNSVFLNDRFIGMKFKAVTFIDSSFLNCYFEDVSSVGSF
FKNCTFIDSFFYNTDIDDAKLTNSQVINSSFHHNKTGCQMTFEDDYSAYWVYFVNFLGTL
AVLPGNIVSALLMDKIGRLSMLGGSMVLSGISCFFLWFGTSESMMIFMLCLYNGLSISAW
NSLDVVTAELYPTDRRGTGFGFCNAMCKLAAVLGNLIFGSLVGITKAIPILLASSVLVGG
GLVGLRLPDTRANVLM
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaacgcacaacaacaggacttccttggtcaaaggtgccaaggacatcgctaaa
gaaaccaagaggcatgctgccaaaaacctcagcaaagctgtcgatcgtgcctcagatgaa
tattcagctcaacgcagctacaatcgtttccagaacgaggatgaagaagagaacaactac
aatacttacactcagcaagatggtcaatatgctgacaatgcagccaatgatgaggacgga
gcctctagtgacgccacggagggccacgacgatgaagatgagatctatgagggggaatac
caaggtgtgcctgcctacaatgatggcaagctgcgggagggtcaggtggctctcggccag
ccagtttccgacagccaaaagagcactaaggagctggaaaacgagagacaggcagatgag
gaggagctggcccagcagtacgagctaatcatgcaggagtgtggccatgggagattccag
tggcagctgttcttcgtactcgggctggcgctcatgtcagacggcgtggaagtgttcgtt
gtgggcttcgtcctgcctagtgctgagacagacatgtgtgtccccaactctggtgccgga
tggcttggtagcattgtgtacctggggatgatgtttggagcctttttttggggcggcctg
tcggacaagttgggccgtaaacagtgcctgctgatatccctgtccgtcaatggcttcttc
gccttcctctcgtccttcgttcaaggctacagcatgttcctcctctgccgcatggtctct
ggctttgggatcgggggagctgttccaatagtattctcttactttgcggaggtgttggct
cgggagaagagaggagagcatctgagctggctctgcatgttctggatgatcggagggatt
tatgcctcagccatggcctgggccatcatcccacactatggctggagcttcagcatgggt
tcagcctaccagttccacagctggagagtgtttgtggtggtgtgtgcgctgccgtgtgtc
tctgcagtggtcgctctcacttttatgcctgagagcccccgcttctacctggagatgggt
aaacacgacgaggcctggatggtgctcaaacagatccatgacaccaacatgcgcgcccga
ggagaaccggagagagtcttcactgtgaacaggataaaaatccccaaacagttggacgag
ctggtggagatgcagaatgagtcagccaaccctgtgctcaaggtcctcttcaagatcaag
actgagctcagagggatctggttgacttttatgagatgcttcaactacccagtgagagac
aacaccatcaaactggctgcagtttggtttactctgtcttttgggtactacgggctgtct
gtgtggttcccggatgtcatcaagcaccttcaggctgatgagtacgcctccagagtgaag
gttcacaacaacgaacgcattgaagacttcaccttcaacttcaccctggaaaaccagatc
cacaggaactctgtctttctaaacgacaggtttatcggtatgaagttcaaggcggtcaca
ttcatcgactcctctttcctcaactgctattttgaagatgtctcctctgtcggatccttc
ttcaagaactgcacctttatcgactcgttcttttacaacacggatattgacgatgccaaa
ctaacaaactcgcaggtgatcaacagctccttccaccacaacaagacagggtgtcagatg
acatttgaggatgattacagcgcctactgggtctacttcgtcaacttcctgggaactctg
gctgtgctgcccggaaacatcgtctctgctctcctcatggataaaatagggcgcctcagc
atgttaggaggctccatggtgctgtcaggcatcagctgcttcttcctgtggttcggaacc
agtgagtcgatgatgatcttcatgctctgtctttacaacggcctcagcatctctgcctgg
aactccctggatgtggtcaccgccgagctgtacccaacagacaggaggggcacaggcttt
ggcttctgtaatgccatgtgcaagctggcagcggtgctgggcaacctgatctttggctca
ctggttggcatcaccaaggcgatccccatcctgctggcatcgtccgtgttggttggcggc
ggcctggtgggcctgcgactgccagacacacgcgccaatgtcctcatgtaa
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