Hippoglossus hippoglossus (Atlantic halibut): 117772216
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Entry
117772216 CDS
T07778
Symbol
dcc
Name
(RefSeq) netrin receptor DCC
KO
K06765
deleted in colorectal carcinoma
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117772216 (dcc)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117772216 (dcc)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
DCC/UNC5 family
117772216 (dcc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Neogenin_C
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_Rha78A_N
V-set
Fn3_VIN3
fn3_SORL1
Interfer-bind
C2-set_2
C2-set_3
Ig_5
Ig_4
Sp38
V-set_CD47
EphA2_TM
Ig_PDGFR_d4
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
117772216
NCBI-ProteinID:
XP_034459079
LinkDB
All DBs
Position
12:21024508..21164188
Genome browser
AA seq
1480 aa
AA seq
DB search
MELDVVGCTCDVWRRGLHLLLLWMLLTAHASDASTSSSSFSSLGGFVDFTFTQEPQDTVT
VRGGVLQLDCQAQSDAVTGPLTITWRKDSVLLSAVVDERRRQLANGSLLVQNVVHSRHHR
PDEGVYQCLATLDGLGSIVSRTAKVTVAGPLKVVVPTESVSSYLGDTALLRCEVSGDPTP
IIRWQKNREDLPGALDPDSRLAVLPSGSLQVSRVQPPDSATYRCLADNPGSTRTGSDAEL
RVLPEPGVSRNLQFLQRPSRVMSLLGTDTVLECSASGYPTPSIQWRRGEELIHSWNKKYS
LLAGSNLIIRSVTDDDSGSYSCSASNKNHNITAHTELSVLVPPQFLNYPTNTYAYESTDI
ELECAVTGTPQPTVRWLKNGEEVIPSDYFQIVDGSNLQILGLVKSDEGFYQCVAENSAGR
SQAMAQLLLRDPGATPTQYRPAHPPAPSGTPLTYSSSSDPPPVSPSPGVVLPSAPRDLVP
VLVSSRFVRLSWRPPEETGRAVQTYGVYYSQDGVERERSVNVSEPESLELTVSNLKPEES
YSFRVVAYNDVGPGESSAPLRITTKPDLQVPSRLESLRVEALSPASLQVSWEAPGQPNGP
VLGYRLMWSESPSDKEQSVEVNGLNYKMEGLHKFTDYTVRVLAINRYGPGPASEAVSVTT
QSDVPSAPPQNITLEVVLSRSIKVSWQPPLRSAQNGVITAYKIKYRKTGRRGDQEAIEPN
NFWYLFTGLEKGSQYSFQVAAMTANGTGPASDWFTAETPENDLDESQVPDQPSSLHVRPL
PNSIIMSWTPPLSPNILVRGYIIGYGVGSPYAETVRVDSKQRYYSIENLEPSSHYVISLK
AFNNAGEGVPLYESAVTRSLTDPIDPSEDDLFHLFDKYPTPMPDTSTPMIPPVGVQAVAL
SSDSVRVSWADNSMTKNQKSSEVRFYSVKWKTSYSTSGKYKSADTTALSHTVAGLKPNTM
YEFAVMVTKGRKSSTWSMTAHATTYEAAPSSAPKDLTVISREGRPRAILISWQPPMEANG
RITGYILYYTLDKNMPIDDWVMEAISGDRLTHQVVDLNLDTVYYFRIQAKNAKGVGPLSE
PVHFRTAKVEHPDKMANDQGRGGDHTYWPSDTNLIDKSSINESPIGQMRPPHGSATPQKN
GNLLVLIVVSVGAVTVVVVVIVALICTRRSSAKQRKKRASTSAGKRKGSQKDLRPPDLWI
HHEEMEMKNMEKAPSVAPSARDSPIQSCQDLPQVAHSQSESQIGSKSSHSGADGDDASSC
ISTLERSLAARRGTRGKMMIPMDSQPSNTPVVSAIPVPALDSSQYPGILPSPSCSFSHNK
FSLRPMPFPSLTVDRGYTPAMPSEISTNPLLQQQPPPQQAPPLLPGSSALPVEHTPVVGP
VPGAPTSAAASEEVQATNARTIPTACVRPTHPLRSFTNPLLPPPMGTIDPKVYTSMLPQS
SEYRCLLGVSQMSHNSTVTDQRLLDQHPADSQPEDPGSIT
NT seq
4443 nt
NT seq
+upstream
nt +downstream
nt
atggagctggatgtggttggatgtacgtgtgatgtttggaggagaggactccacctgctg
ctgctctggatgctgctgaccgcgcacgcctcagatgcttccacatcttcctcctctttt
tcgagtctcggaggttttgtggactttactttcacgcaggagcctcaggacactgtgacg
gtgcgagggggcgttctgcagctcgactgccaggcacagtctgacgcagtgacgggacct
ctcaccatcacgtggcgtaaagatagcgtgctgctgagtgctgtggtggacgagcggcgg
cggcagctggctaacggctcattgctggtgcagaatgtggtgcactcgcggcatcaccgg
cctgacgagggggtgtaccagtgcctcgccacgctggacggactggggagcattgtgagt
cggaccgccaaggtgactgtggccggacctctgaaggtggtcgtccccaccgagtcggtc
tcctcatacctcggtgacacagcccttctacgctgtgaggtctccggcgacccgacaccc
atcatccgctggcagaagaaccgggaggacctgccgggggccttggacccagactcccgt
ctggcggtgctgccgtccggctcgctgcaggtcagccgtgtccagccgccggattcagcc
acttaccgctgtctggccgacaacccaggcagcaccaggacgggatcggacgccgagctg
cgagtgctcccagaacctggggtgagcaggaacctccagttcctccagcgtccatccaga
gtcatgtctctgctgggaaccgacactgtgctggaatgttctgcctctggatacccgact
ccaagcatccagtggaggagaggagaggagctgatccacagctggaataagaagtactcc
ctgctggcgggcagtaatctgatcatcaggagcgtcactgacgatgactctggcagctac
agctgttctgcctccaacaagaaccacaacatcactgcacacacagagctcagcgtgctc
gtgcctccacagttcctgaactacccaaccaacacgtacgcttacgagtccaccgacatc
gagctggagtgtgccgtgacgggaacccctcagccgacagtccgctggctgaagaacgga
gaggaagtcatccccagcgactacttccagattgtggacggcagcaacctgcagattctg
ggtttggtaaaatccgatgaaggattttatcaatgtgtcgctgaaaactcggccggccgc
tcacaggccatggctcagctgctgctgcgagatccaggggccacgcccactcagtataga
cccgcccaccctcctgctccgtcaggcacccctttgacttactcctcctcctctgatccc
ccaccagtgtcccccagcccaggcgttgtcctcccctctgccccccgcgacctggtccct
gtcctagtgtccagccgatttgtccgactcagctggcgccccccagaggagacgggacga
gccgtgcagacctatggtgtttattactcccaggacggagtcgagagggagcggtcggtg
aacgtgtcggagcctgagtctttggaactgacggtttctaacctgaaaccagaagagagc
tacagcttccgagtcgtcgcttataacgacgtgggaccaggagagagctccgcccccctg
aggatcaccaccaaacccgacctccaggtccccagccggctggagtccctccgagtggaa
gctctgtcccccgcctccctccaggtgagctgggaagctcccggccaaccaaacggcccc
gtgctcggctacaggctgatgtggagcgagagtccgtccgacaaggagcagagtgtggag
gtgaacgggctcaactacaaaatggagggactccataagttcaccgattacaccgtccgt
gttctggccatcaaccgctacgggccaggccccgcctccgaggccgtgagcgtcaccacc
caatcagatgtgcccagcgctcctcctcagaacatcacattagaggtcgtcctgtccagg
agcatcaaggtgtcatggcagccgcctctgcgcagcgcccagaacggcgtcatcaccgcc
tacaagatcaaatacaggaagacgggtcggcgtggcgaccaagaggccattgaacccaac
aacttctggtacctgttcacaggtttggagaagggcagtcagtacagtttccaggtcgca
gccatgacggccaatggaacaggtccagcaagcgactggttcactgctgagacaccagaa
aacgacctggatgagagtcaggtacccgaccagccgagctctctgcacgtcaggccgctg
cccaacagcatcatcatgtcctggactccacccctcagccccaacatcctggtccgaggt
tacatcatcggctacggagtgggaagtccttatgcagagacggtccgggtggacagcaag
cagagatactactccatcgaaaacctggagcccagctcgcactatgtgatttccctgaag
gcattcaataacgctggagagggagttcccctgtatgagagcgccgtcactcgatctctg
acagaccccatagacccatccgaggatgaccttttccatctctttgataaataccccact
cccatgccagacaccagcactcccatgattcccccagtgggggtccaagctgtggctctg
tcctcagactccgtccgggtgtcctgggctgacaactccatgaccaagaaccagaagtcg
tctgaggtccggttctactccgtcaagtggaagaccagctactccaccagcggaaagtac
aagtctgcagacaccacggcgcttagccacactgttgccggcctcaaaccaaacaccatg
tacgagtttgctgtcatggtaaccaaaggccgcaagtcgagcacatggagtatgacggca
cacgccacgacgtacgaagcagctcctagctccgcccccaaagacttaacggtgatcagt
cgtgaaggacgaccccgcgccattttaatcagctggcaaccgccgatggaggctaacgga
cgaatcacaggttacatcctgtactacacgctggataagaacatgccgatagacgactgg
gtgatggaggcgatcagcggcgaccggctgactcaccaggtcgtcgatctgaacctcgac
acggtttattacttcaggattcaggccaagaacgccaaaggggtcggcccgctgtcggag
cccgtccacttcaggaccgccaaagtggaacatccagacaagatggccaatgatcaaggt
cgcggaggagaccacacctactggccgtctgacaccaacctcattgacaagagcagcatc
aacgagtctcccattggtcagatgcgtccacctcacggcagcgccacaccacaaaagaac
ggcaaccttctggtactcatcgtggtttccgtgggagccgtcacagtagttgtggtcgtc
atcgtcgcgctaatctgcaccaggcgctcctcggcgaaacagaggaagaagagagcgagt
accagtgccggtaagaggaagggcagccagaaggacctgcgacctcctgacctctggatc
caccatgaggagatggagatgaagaacatggagaaggcgccgagcgtcgccccatcggca
cgtgactcgcccatccagtcctgccaggacctcccccaggtcgcacacagccaatcagag
agccagattggcagcaagagcagccattcaggagcggacggagatgacgcctccagctgt
atctcgactctggagcgctccctggctgccaggaggggaacacgaggaaaaatgatgatt
cctatggactcacaaccaagtaacacaccggttgttagtgcgatcccggtgccagctctg
gactcgtctcagtatcctggtatcctgccttcaccttcctgcagcttctcacacaacaag
ttcagcctgagaccgatgcctttccccagcctgacggtggacagaggttacacaccagcg
atgccctcggagatctccaccaatcctctcctccagcagcagcctccaccacagcaggcc
cctcccctccttccgggctcctccgccctgcccgttgagcacactcctgtggtcggtcca
gttccgggcgctccaacttcagctgcagcctctgaggaggtccaggcaacgaatgctcgg
accatcccaacggcctgtgtgcggcccacgcacccgctacgaagtttcaccaacccactg
ctgccaccacccatggggaccatcgaccccaaggtgtacacatccatgcttccgcagtcc
agtgagtacagatgtttgttgggtgtttcacaaatgagtcacaacagcaccgttaccgat
cagcgtctgctggatcagcatccagccgacagtcagccagaggatcctggctccatcacc
tga
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