Hippoglossus hippoglossus (Atlantic halibut): 117772217
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Entry
117772217 CDS
T07778
Name
(RefSeq) LOW QUALITY PROTEIN: netrin receptor DCC-like
KO
K06765
deleted in colorectal carcinoma
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117772217
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117772217
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
DCC/UNC5 family
117772217
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Neogenin_C
fn3
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Ig_Rha78A_N
Fn3_VIN3
fn3_SORL1
Interfer-bind
EphA2_TM
Arylsulfotran_N
Motif
Other DBs
NCBI-GeneID:
117772217
NCBI-ProteinID:
XP_034459080
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Position
12:complement(21184120..>21247420)
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AA seq
1089 aa
AA seq
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ATPTQYRPAHPPAPSGTPLTYSSSSDPPPVSPSPGVVLPSAPRDLVPVLVSSRFVRLSWR
PPEETGRAVQTYGVYYSQDGVERERSVNVSEPESLELTVSNLKPEESYSFRVVAYNDVGP
GESSAPLRITTKPDLSVPGPQPAGSPSEWKLCPPASLQVSWEAPAXPNGPVLGYRLMWSE
SPSDKEQSVEVNGLNYKMEGLHKFTDYTVRVLAINRYGPGPASEAVSVTTQSDVPSAPPQ
NITLEVVLSRSIKVSWQPPLRSAQNGVITAYKIKYRKTGRRGDQEAIEPNNFWYLFTGLE
KGSQYSFQVAAMTXHGTGPASDWFTAETPENDLDESQVPDQPSSLHVRPLPNSIIMSWTP
PLSPNILVRGYIIGYGVGSPYAETVRVDSKQRYYSIENLEPSSHYVISLKAFNNAGEGVP
LYESAVTRSLTDPIDPSEDDLFHLFDKYPTPMPDTSTPMIPPVGVQAVALSSDSVRVSWA
DNSMTKNQKSSEVRFYSVKWKTSYSTSGKYKSADTTALSHTVAGLKPNTMYEFAVMVTKG
RKSSTWSMTAHATTYEAAPSSAPKDLTVISREGRPRAILISWQPPMEANGRITGYILYYT
LDKNMPIDDWVMEAISGDRLTHQVVDLNLDTVYYFRIQAKNAKGVGPLSEPVHFRTAKVE
HPDKMANDQGRGGDHTYWPSDTNLIDKSSINESPIGQMRPPHGSATPQKNGNLLVLIVVS
VGAVTVVVVVIVALICTRRSSAKQRKKRASTSAGKRKGSQKDLRPPDLWIHHEEMEMKNM
EKAPSVAPSARDSPIQSCQDLPQVAHSQSESQIGSKSSHSGADGDDASSCISTLERSLAA
RRGTRGKMMIPMDSQPSNTPVVSAIPVPALDSSQYPGILPSPSCSFSHNKFSLRPMPFPS
LTVDRGYTPAMPSEISTNPLLQQQPPPQQAPPLLPGSSALPVEHTPVVGPVPGAPTSAAA
SEEVQATNARTIPTACVRPTHPLRSFTNPLLPPPMGTIDPKVYTSMLPQSSASLPKPQVK
TASLGQAGKARSPLLPVSVPTAPDFLEEGETKPAEDSAANVYEQDDLSEQMASLEGLMKQ
LNAITGSAF
NT seq
3272 nt
NT seq
+upstream
nt +downstream
nt
gggccacgcccactcagtatagacccgcccaccctcctgctccgtcaggcacccctttga
cttactcctcctcctctgatcccccaccagtgtcccccagcccaggcgttgtcctcccct
ctgccccccgcgacctggtccctgtcctagtgtccagccgatttgtccgactcagctggc
gccccccagaggagacgggacgagccgtgcagacctatggtgtttattactcccaggacg
gagtcgagagggagcggtcggtgaacgtgtcggagcctgagtctttggaactgacggttt
ctaacctgaaaccagaagagagctacagcttccgagtcgtcgcttataacgacgtgggac
caggagagagctccgcccccctgaggatcaccaccaaacccgacctgtcagttccaggtc
cccagccggctggaagtccctccgagtggaagctctgtccccccgcctccctccaggtga
gctgggaagctcccgccnaaccaaacggccccgtgctcggctacaggctgatgtggagcg
agagtccgtccgacaaggagcagagtgtggaggtgaacgggctcaactacaaaatggagg
gactccataagttcaccgattacaccgtccgtgttctggccatcaaccgctacgggccag
gccccgcctccgaggccgtgagcgtcaccacccaatcagatgtgcccagcgctcctcctc
agaacatcacattagaggtcgtcctgtccaggagcatcaaggtgtcatggcagccgcctc
tgcgcagcgcccagaacggcgtcatcaccgcctacaagatcaaatacaggaagacgggtc
ggcgtggcgaccaagaggccattgaacccaacaacttctggtacctgttcacaggtttgg
agaagggcagtcagtacagtttccaggtcgcagccatgacgngccatggaacaggtccag
caagcgactggttcactgctgagacaccagaaaacgacctggatgagagtcaggtacccg
accagccgagctctctgcacgtcaggccgctgcccaacagcatcatcatgtcctggactc
cacccctcagccccaacatcctggtccgaggttacatcatcggctacggagtgggaagtc
cttatgcagagacggtccgggtggacagcaagcagagatactactccatcgaaaacctgg
agcccagctcgcactatgtgatttccctgaaggcattcaataacgctggagagggagttc
ccctgtatgagagcgccgtcactcgatctctgacagaccccatagacccatccgaggatg
accttttccatctctttgataaataccccactcccatgccagacaccagcactcccatga
ttcccccagtgggggtccaagctgtggctctgtcctcagactccgtccgggtgtcctggg
ctgacaactccatgaccaagaaccagaagtcgtctgaggtccggttctactccgtcaagt
ggaagaccagctactccaccagcggaaagtacaagtctgcagacaccacggcgcttagcc
acactgttgccggcctcaaaccaaacaccatgtacgagtttgctgtcatggtaaccaaag
gccgcaagtcgagcacatggagtatgacggcacacgccacgacgtacgaagcagctccta
gctccgcccccaaagacttaacggtgatcagtcgtgaaggacgaccccgcgccattttaa
tcagctggcaaccgccgatggaggctaacggacgaatcacaggttacatcctgtactaca
cgctggataagaacatgccgatagacgactgggtgatggaggcgatcagcggcgaccggc
tgactcaccaggtcgtcgatctgaacctcgacacggtttattacttcaggattcaggcca
agaacgccaaaggggtcggcccgctgtcggagcccgtccacttcaggaccgccaaagtgg
aacatccagacaagatggccaatgatcaaggtcgcggaggagaccacacctactggccgt
ctgacaccaacctcattgacaagagcagcatcaacgagtctcccattggtcagatgcgtc
cacctcacggcagcgccacaccacaaaagaacggcaaccttctggtactcatcgtggttt
ccgtgggagccgtcacagtagttgtggtcgtcatcgtcgcgctaatctgcaccaggcgct
cctcggcgaaacagaggaagaagagagcgagtaccagtgccggtaagaggaagggcagcc
agaaggacctgcgacctcctgacctctggatccaccatgaggagatggagatgaagaaca
tggagaaggcgccgagcgtcgccccatcggcacgtgactcgcccatccagtcctgccagg
acctcccccaggtcgcacacagccaatcagagagccagattggcagcaagagcagccatt
caggagcggacggagatgacgcctccagctgtatctcgactctggagcgctccctggctg
ccaggaggggaacacgaggaaaaatgatgattcctatggactcacaaccaagtaacacac
cggttgttagtgcgatcccggtgccagctctggactcgtctcagtatcctggtatcctgc
cttcaccttcctgcagcttctcacacaacaagttcagcctgagaccgatgcctttcccca
gcctgacggtggacagaggttacacaccagcgatgccctcggagatctccaccaatcctc
tcctccagcagcagcctccaccacagcaggcccctcccctccttccgggctcctccgccc
tgcccgttgagcacactcctgtggtcggtccagttccgggcgctccaacttcagctgcag
cctctgaggaggtccaggcaacgaatgctcggaccatcccaacggcctgtgtgcggccca
cgcacccgctacgaagtttcaccaacccactgctgccaccacccatggggaccatcgacc
ccaaggtgtacacatccatgcttccgcagtccagtgctagtctcccaaagccccaggtga
agacggcttctctgggtcaggcgggtaaggctcgatcgcctctgctgcctgtctcggtcc
caacggcgccagacttcctcgaagagggagaaacgaaacccgccgaggattcagctgcca
acgtttacgagcaggacgatctgtctgagcagatggccagtctagagggactgatgaagc
agctcaatgctattactggttcagccttctaa
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