Hippoglossus hippoglossus (Atlantic halibut): 117772306
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Entry
117772306 CDS
T07778
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
117772306 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hhip03041
]
117772306 (snrpa)
Spliceosome [BR:
hhip03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
117772306 (snrpa)
Complex B
117772306 (snrpa)
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Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
xRRM
Motif
Other DBs
NCBI-GeneID:
117772306
NCBI-ProteinID:
XP_034459210
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All DBs
Position
13:complement(11024277..11027379)
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AA seq
282 aa
AA seq
DB search
MATTDVRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVAQNLKMKGQAFVIFK
EVNSASNALRSMQGFPFYDKPMRIQYAKMDSDIIAKMKGTFVERDRKKEKKKPKVPDAAG
AKKGVAGAAVPMVAGVPAAMPGMPPMNQAPRMMHMPGQPPYMPPPGMMPPPGMAPGQMPP
GAMPPGQMMPGQMPGQMPQQVAENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLV
PGRHDIAFVEFENEVQAGAARDALQGFKITQTNAMKISFAKK
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atggccacgacggacgtacggctcaaccatacaatctacatcaacaacttgaatgagaag
atcaagaaagatgagttgaaaaagtccctgtacgccatcttctcccagttcggccagatt
ttggacatcctggtcgcacagaacctgaagatgaagggtcaggcctttgtcatcttcaaa
gaagtaaacagcgcctcgaatgctctgagatccatgcaggggttccctttctatgacaag
cccatgcgtatccagtacgccaagatggactctgacatcattgctaagatgaaggggacg
ttcgtagagcgtgaccgcaagaaagagaagaagaagcccaaagtacctgatgcagcagga
gctaagaagggtgttgcaggagctgctgtgcccatggtcgctggagtgcctgctgccatg
cctggaatgcctcctatgaaccaggctccccgcatgatgcatatgccaggccagccgccc
tacatgccgcctccaggcatgatgcctcctccaggcatggcacctggtcagatgccccct
ggtgctatgcctcctggtcagatgatgcccggacagatgcctggacaaatgccccagcag
gtcgcggaaaatccaccaaatcacatcctcttcctcaccaacctgccagaggagaccaac
gagctcatgctctccatgctcttcaaccagttcccggggttcaaggaagtgcgtctggtt
cctggtcgccacgacatcgcctttgtggagtttgagaatgaagtgcaagccggcgctgca
cgagacgcactacagggctttaagatcacacaaacgaatgcaatgaagatctcgttcgca
aagaaataa
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