Hippoglossus hippoglossus (Atlantic halibut): 117772316
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Entry
117772316 CDS
T07778
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
117772316 (slc6a4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hhip02000
]
117772316 (slc6a4a)
Transporters [BR:
hhip02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
117772316 (slc6a4a)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
117772316
NCBI-ProteinID:
XP_034459233
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Position
13:23675174..23691277
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AA seq
675 aa
AA seq
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METKDMMMTSMFSMDKGENDGERDKGREEDVRGEEEGTQQENGRLMLADGLAEKGPKSLT
SCSGQQVSNGLNPSTAQSPREGPGTAACSGGTAPAPGGSTSSPVPLGGLRTLVVQQTSLE
RPRETWSKKMDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLLPYLLMAVFGGVPLFYME
LALGQFHRSGCISIWKHICPIFKGIGFAICIIALYIAFYYNTIMAWALYYLLSSFRPTLP
WTTCTNSWNTANCNSYMSTDHNVSWSNSSTSPAEEFYTRHVLQVHLSPGLHQLGSVSWQL
ALCLLFIFTIVYFSIWKGVKTSGKVVWVTATFPYLVLLILLVRGATLPGAWRGVVFYLKP
DWQKLLSTTVWIDAAAQIFFSLGPGFGVLLAFASYNPFHNNCYKDALITSSVNCLTSFLS
GFVIFTVLGYMAEMRQQDVDAVAKDAGPSLLFIIYAEAIANMPAATFFAIIFFLMIIMLG
LDSTFAGLEGVITAMLDEFPQLLAKRREWFVFGLVCVCYLGALSTLTYGGAFVVKLFEEY
ATGPAVITVVLLEVIAVSWFYGTNRFCNDIQLMLGFYPGCFWRVCWVAICPCFLLFIIIS
FLAFPPEVKLFHYHYPQWTTVLGYCIGVSSFICVPAYMVFHLLTAKGTFKQRLLKSITPE
PSCNDHRDFIVTNAV
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggagacgaaggatatgatgatgaccagcatgttctcaatggacaagggggagaatgat
ggagagagggataaagggagagaggaggatgtgaggggagaagaggaggggacgcagcag
gaaaatggcagactgatgctggctgatggtcttgcagagaaaggacccaagagcctgacc
tcgtgctctggccagcaggtgtccaatggcttaaatccatccaccgctcagagccccagg
gagggaccggggaccgcagcttgctctgggggtacagcacctgcgcctggcggcagcacc
agctcccccgtgccgctgggaggcctcaggactctagtggtccaacaaaccagcttggag
aggcccagagaaacctggagcaagaagatggacttcttgctgtccgtgatcggctatgct
gtggacctgggaaatgtctggcgcttcccctacatctgctaccagaacggaggaggtgcc
ttcctgctgccctacctgttgatggcggtgttcggaggcgttcctctcttctacatggag
ctggctctcggccagttccaccgcagcggctgcatctccatctggaaacacatctgtccc
atcttcaaagggattggttttgccatctgcatcatagccctctacatagccttctactac
aacaccatcatggcctgggccttgtactacctgctatcatcatttcggcccaccctgccc
tggaccacctgcaccaacagctggaacacagccaactgcaacagttacatgtccaccgac
cacaacgtgtcgtggtccaactcctccacctcccccgccgaggagttctatactcgccat
gtgctacaggtccacctctcccccgggctgcaccagctgggctctgtcagctggcaactg
gccctctgcctgctcttcatcttcaccatcgtctacttcagcatctggaaaggagtcaag
acgtctggaaaggtagtgtgggtgactgctaccttcccctacctggtccttctgatctta
ctcgtccgtggtgccactctgccaggggcttggagaggcgttgtcttctatctcaaacct
gattggcaaaaactccttagcactacagtgtggattgatgcagcagctcagatcttcttc
tctctgggtcccgggtttggtgtgctcctcgccttcgccagctacaacccatttcacaac
aactgctacaaagatgcgttgatcaccagctcagtgaactgtctgactagctttttgtct
ggcttcgtcatcttcacggtgctgggatacatggctgagatgaggcagcaggatgtggat
gctgtggccaaggatgctggtcccagtctgctgttcatcatttatgctgaggccatagca
aacatgcctgctgccactttcttcgccatcatctttttcctcatgatcatcatgttgggt
ctggacagcacgtttgcggggttggagggagtgatcacagccatgctagatgagttcccg
caactcctggccaagaggcgcgagtggtttgtcttcggcctggtgtgcgtctgctacctt
ggggctctctccacgctcacatacggaggagcgtttgtggtgaagctgtttgaggagtac
gctacaggccctgcagtcatcaccgtggtgctgctcgaggtcatcgccgtctcctggttc
tacggtaccaaccgtttctgcaatgacatccagctcatgctgggtttctaccctggttgt
ttctggagggtctgctgggtggcaatctgcccctgtttcctgctgttcatcatcatcagt
ttcctggccttccctccagaggtcaagttgttccactaccactacccacaatggaccacc
gtcctgggctactgcattggggtgtcctcgttcatctgtgtacctgcttatatggtcttc
cacctgctcactgccaagggcacattcaaacagcgtctgttaaaaagcatcactccagag
cccagctgtaacgaccacagagacttcattgtcaccaacgcagtctga
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