Hippoglossus hippoglossus (Atlantic halibut): 117772701
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Entry
117772701 CDS
T07778
Symbol
brca2
Name
(RefSeq) breast cancer type 2 susceptibility protein
KO
K08775
breast cancer 2 susceptibility protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03440
Homologous recombination
hhip03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
117772701 (brca2)
03460 Fanconi anemia pathway
117772701 (brca2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117772701 (brca2)
03036 Chromosome and associated proteins [BR:
hhip03036
]
117772701 (brca2)
03400 DNA repair and recombination proteins [BR:
hhip03400
]
117772701 (brca2)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
117772701 (brca2)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
117772701 (brca2)
DNA repair and recombination proteins [BR:
hhip03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
117772701 (brca2)
FA (Fanconi anemia) pathway
Downstream FA components
117772701 (brca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA2
BRCA-2_OB3
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
117772701
NCBI-ProteinID:
XP_034459941
LinkDB
All DBs
Position
13:complement(6159675..6173142)
Genome browser
AA seq
2895 aa
AA seq
DB search
MESPSNMYDTFKDKIWKELGPLDPDWFHVLTAQTSTNEGNVSDQDDLCANQEGNFKAPCD
RTALESQLFSTPKVFRHRRVVSPETEGEQSFTAEQEKEARPWKETQSPCLFQMTKERVPG
AKCGRFDFLQTSPKSPVSYAKQISESLGAQIHPDISWTSSLNTPPAVPSTLILSKTDESP
CPMSVSSDSNVVFVRKLFPSLSNASVAAAVSPQNHDVPVHTGVVSPEAGQNPESHNSPQD
SLNPSPSGWRQKLPDAIEDGDVRSTVASVLDGAQNVLSMFFSNSSSALRKVKTDRIKRKQ
IISPKERGYSFTDVSTTNNAALLEQSTDDREPVKISSPPPQKTRDTGITQWSPLSLSEIP
PSTVDPSCRDNNHAATQVDDKTVPEQLRSNSDSGQLTRSHLTGSYYGFTKKKRQFVYTIE
TPKTQAQGNETPSVKNDTSPRLPGNKGSAKLLGEIQDEADCCRIREDEIQKQKNVTGENV
PVQPKAQDLDMSQLCRDFAQDFSQMLDPGKPSEVAEDTPQNGFSPSTCLNAMKQAKQRVR
RVNFPHDCDHTTERKPVSATAQNYSINEGTGVDSGFQSAVADISHLTSTSFILPTSENIA
QSQQWTGFKTETQRAASSLSTNIKHVKYHSDDILEGAETDAKMPSAVKASQTLGPCRESE
LHVESTSTELPSGATEGVNNINHFPVKCPSDGNFPERATVSLPSVHASGFKTASNKAIEV
SSAHLERAKHLFEENEAERPFSAEPTKRGHDAKEEIRISMDSVKNTISDSKQPLSTSERF
GDIGCQLTASQKADVTELCTLLEEADTQFDFTQFKTAKLQQHCQDNATSPQKADKELDPD
FLMGIDFDDSFSSDAEKHKMRSVSDGTTNCEASNLTNKSTLTKENSSTEDASPSSKSISD
GRRCIVSAEPQNPHRAGYTETSEQENKTPLMSGAGFKTARGSDLRISKERLSKARALFAD
LGENLTDQKSGDKLSSDAAAKTEQRQITSITDKNAALNNSKMDAASYQSGFQLASGKGVS
ISAKAMQEADSLFKDCDITDNKSGASVKHQKNTEPLPTFSHTKNLLKLKSIQGRGDNFSE
EAIGECSKASAGPAASHTKVVQHNSTVKAFSSPSCSTSKSSGSSGMNQTNNGGGFCTASG
KKVRVSADAVKKAERLLNEIHAPEDTKKQLQQEGDTLRTAHVADRIQVGPIQNGGFQTAS
GKGVVVSAAALKKAKSLLIQCEAVEDEIDVKPSHSKTPVRGLAPRTSGFLAASGKPVGLS
AEALQKAKALFSDITLGAELPAVSDTKKSQGNTENSDKTHGGFMTAGGATAGLSKKKKFK
ANNILKEFDNGSVSVKSLQEADAFFKDGDIMDRNNGTTVQYESGVAPVSGGGSEKKQDQR
LTNTSEERGSGRYVNQNGFLPPSHVKILEDLTNGNPSKQLSSPLCTTSEKTGSSAFNKFS
SSGGFCTASGKKVCVSDDAMTKAMSLLNESALLTDTNKNLKQKEDSGTPQSGGKGVALSF
AAQKKEKTTNTKLPVSCSPQRKGGFLAASGKPVAFSYEALQKAKALFSDMDFSAEIPTVS
GTRKSDKHDEAQSSAGKISCGFSTAGGAKVSVSQTNLLKAKNLLKEFADEETRPSDSYST
SPRATPKSDLSNIKNVERSTSCTLTTASEKDMSAEESAPEVVESFQSVVTDPENETLREN
AVKGASEVKEGKTSVSWEGKLHDTLGKETANLLGCEVKRTNCGEGPKSKRPEESSYQIFP
SLHFSGCSETQQRFLAQEALDCTKALLEDESLSVTSENEPLQDYPGSNATSAEEQKGRGK
RLGDDANMTVQPPLKRRLLDEFDRTVVGPRGSTLHPQKTCPNSVMKDRRAFKFQASPHPN
ITQPHRNGKNYVETKLQNTTPAQHFTSGGSRSAHSNMPAFVPPFLKNAKMETCKDAVLKV
NTRTPPAFVPPFKKQRTIVQESSCKPQQEEDKHQHLFVTPTNGSTILPPTKKTQSSTDVA
GNTSKVDIPPVALADTKHDYLTDNHNVPVGCGSGDSAAKATREDDTFSRGQDMFQNLENV
ELARDMQDMRIRKKKRQTIRPLPGSLFLTKTSGVSRIPLKAAANGKLPGRYTSKQLYGYG
VHQHVSDISSETAEAFRFNVHQFLKLEAFTDGGGVQLADGGWLIPSKDGTAGKEEFYKAL
CDTPGVDPKLMSEEWVFNHFRWIVWKQASMERSFPETMGGLCLTPQQVLLQLKYRYDVEI
DHSRRPALRKIMEKDDTSAKTQVLCICGVVSRGHSSIRPSRGDTKTPQGADAKVEPPSAV
VWLTDGWYAIKAQLDEPLTAMLHKGRLAVGGKLIVYGAQLVGSQEACSPLEAPESLMLKI
YANSTRPARWDTKLGFHRDPRPFLLPISSLYSNGGPVGCVDITILRSYPIQWMERKPDAG
VVFRSGRAEEKEERRYSSQNQKSMEILFTKIQTEFEKEQTGNNKPQRRRRTINRKDIANL
QDGEELYEAVEDDPAYLEAHLSEQQMETVQTYRRSLMEKKQAELQDRYRRALEAESGDGT
CPKRDVTPVWKLCVSDSMGSGSVYQLNFWRPSSDLQALLKEGRRYKVYNLSTSEGKKRSG
IETVQLTGTKKTQFQDLEAQEWLSEQFQPRVSTSFMNLQNPEFQPLCGEVDLTGFIISIM
DGQGSSPAVYLADGELNFVKVRCFSSFAQSGLEDVVKPRVLLALSNLQLRGQSLSPTPVL
YAGDLTVFSTNPKEVHLQESLSQLRNLLQGQQNFFLTAEETLLHLLKSDGLRSISSPAVH
PLTPACATDMRQDTKTSLIAQQPIRSFGSFTPVSRNPPAPTSLTEKDPKSLKRTRALDYL
CRIPSPPALSHLGSVATPCVKKTFNPPRRSETPSTLKTEQTPARKPVVSPKEGEWVNDEE
LAMIDTQNLGVGDSM
NT seq
8688 nt
NT seq
+upstream
nt +downstream
nt
atggagtctccctcgaacatgtacgacaccttcaaagataagatctggaaagagctggga
ccactggaccccgactggtttcacgtcctgacggctcaaacgtccaccaatgagggaaat
gtctctgaccaagatgacctctgcgccaaccaagagggaaacttcaaagccccctgtgac
agaaccgcactggagagtcagctgttttctacccctaaagttttcagacacagacgagtt
gtgtcccctgaaacggagggtgagcagtcgttcactgctgaacaagaaaaagaagcacgg
ccatggaaggaaacacaaagtccatgtttgtttcagatgacaaaagagagggtccctgga
gcaaaatgtggacgttttgattttcttcagacctctcccaaatccccagttagctatgcc
aagcaaatatctgaaagtctaggtgcacagattcatccggacatatcgtggacgagttct
ctgaacacccccccagctgtgccgtccactctgattttatctaaaaccgatgagagtccc
tgtccaatgagtgtttcttcagacagcaatgttgtttttgtacggaagctttttccttct
ctttcaaacgcatccgtagctgcagcagtatcaccccaaaaccacgatgtgccggttcac
acaggtgttgtttcccctgaggctggtcagaatccagagtcccataactccccccaggat
tcactgaatccaagtccgagtggttggcgacagaagcttccagacgctattgaagatgga
gatgtacgcagtaccgtggcgagtgttcttgatggagcgcaaaatgttctttccatgttt
ttctccaacagtagttcagccctgagaaaagtgaaaactgacagaatcaagagaaaacag
atcatctcgccaaaagaacgtggctacagctttacagacgtctcgactactaacaacgct
gcattactggaacagagtacagatgatcgggaacctgtcaaaatatcctcacccccacca
cagaagactagagatactggaatcacccagtggtctccattgagtttatctgaaattcct
ccctcgaccgtagatccctcttgcagggataataatcatgctgctacacaagtggacgac
aaaactgtaccagaacaactgcggagcaactctgattctggccaactcaccaggtcgcat
ttgacaggctcatactatggatttacaaagaaaaagagacaatttgtttacaccattgag
actccaaaaacacaagctcaagggaacgagacaccatctgtgaagaatgacacctccccc
aggcttccagggaacaaagggagtgccaagctgttgggggaaatccaagatgaagcagac
tgttgcagaatcagggaggatgagatacaaaaacagaaaaatgtcacgggagaaaacgtt
cctgttcaaccaaaagcccaggatcttgacatgtcgcagctctgcagagattttgcacaa
gacttcagtcaaatgttagaccccgggaaaccaagtgaggtagcagaggatactcctcaa
aatggcttctctccctcaacttgtctgaacgccatgaagcaagccaagcagagagtgaga
cgagtaaactttccccatgactgtgatcacaccactgagagaaaacctgtttctgccact
gctcagaattactccatcaatgagggaacaggagttgacagcggattccagtctgctgtt
gcagacatctctcatctgacttccacctcctttattcttcccacctccgagaacattgct
caaagtcaacaatggactggctttaaaactgaaacccaaagagctgcttcttctctatct
acaaatattaaacatgtaaaatatcattcagatgatattttagaaggagctgaaactgat
gccaagatgccgagtgcagtcaaggcaagccagacactgggcccttgcagagagagtgag
ttacacgtagagagcacatcaacagaactgcccagtggtgcaacagaaggtgttaataac
atcaatcactttccagtcaagtgtccaagtgatggcaactttccagagagagcgacagtg
tctcttccttccgtccatgcatcaggattcaaaaccgcttcaaataaggctatagaggtt
tcctcagcccacctggagagagccaagcatctgtttgaagaaaacgaagctgaaaggccc
tttagtgctgagccgaccaaaagaggccatgacgctaaagaagaaattcgcatcagtatg
gattcagtgaaaaatacaatctctgactcaaagcagccactgtctacgagtgaaagattt
ggggatataggttgtcagctaacagcgtcacaaaaagctgacgtgacagaactgtgcacc
ctcctggaagaagcagatactcagtttgactttacacagttcaaaactgcgaagctacag
cagcattgtcaagataacgccacctccccccaaaaagctgacaaagaacttgaccctgat
tttcttatgggtatcgattttgatgacagctttagttccgatgctgaaaagcataaaatg
aggtcagtttcagacggtacgacaaactgtgaggcatcaaatctgacaaataaatccacc
ctgacaaaagaaaattcctctactgaagatgcgtctccctcttcaaagagcatctctgac
ggcagacgctgtattgtgtcagctgaaccccaaaatcctcacagagctgggtacactgag
acaagcgagcaggagaacaaaacccctttgatgtctggtgcaggattcaaaactgcgaga
ggaagtgatttgagaatttcaaaagaacgtttgagcaaagccagagctttgtttgcagat
ttaggggaaaatctgactgaccagaagtcgggagacaagctaagcagtgatgctgctgct
aaaactgagcagcgacagatcaccagcattacagacaaaaatgctgcattgaataacagc
aaaatggacgcagcttcgtatcaaagtggattccaactggccagtgggaagggggtttcg
atttcagcgaaagctatgcaagaggccgattctctcttcaaagactgcgacattaccgac
aataagtctggtgcatctgtaaaacatcaaaagaacacagaaccgttgcctacattcagt
cacacgaaaaaccttttgaagcttaaaagtatccaaggacgtggagataacttttctgaa
gaagcaatcggtgaatgttcaaaagcaagtgctggaccagctgccagtcatacaaaggtt
gtacagcacaattccaccgtaaaagcgttttcttctccctcgtgctcaacatcaaagagt
tctggctcctctggaatgaatcagacgaacaatggcggtggattctgtacagccagcggg
aagaaggtccgcgtgtcggctgatgcggtgaaaaaagctgagcgtctgttaaatgaaatt
catgcacctgaggacacaaagaaacaactgcaacaggaaggagacactttaagaacagct
catgtggccgatcgaattcaagttggaccaattcaaaatggtggatttcaaacagccagc
ggcaaaggagtcgtcgtttcagctgcagctctcaagaaagcaaaatcgctgttgattcaa
tgtgaagcagtcgaggatgaaatcgatgtaaaaccatctcactccaagacgcctgttcga
ggtcttgcacccaggacaagtggatttcttgcagccagtgggaaacctgtgggactttca
gctgaggccctccagaaggcaaaagctcttttcagtgacatcactctcggtgcagagctc
ccggctgtttccgacacaaagaagagtcaaggcaacacggaaaattcagacaaaacacac
ggtggtttcatgactgcagggggcgcaacagcgggcttgtctaagaaaaaaaagttcaaa
gcaaacaacattttgaaagaatttgataatggttctgtttccgtaaaatcgctgcaagaa
gcagatgctttcttcaaagacggtgacatcatggacagaaacaacggaaccacggttcag
tatgagagcggtgtagcacctgtgagtggaggtggcagtgagaagaaacaagatcagagg
ctgacaaacacttctgaagagcgtggaagtggacgctatgtaaaccagaacggttttctg
cctcccagtcatgtgaagatacttgaagatttgaccaatggaaacccgtcaaagcaactt
tcttccccgttgtgcacaacatcagagaaaactggttcctctgccttcaataaatttagc
agcagtggtgggttctgtacagccagtgggaaaaaagtgtgtgtgtcagatgatgcaatg
actaaagcaatgtcactattgaatgaaagtgctttgcttacggataccaacaaaaatctg
aaacaaaaagaagacagtgggacgcctcagagtggtggaaaaggagtcgctctttcattt
gcagcccagaagaaagaaaaaacgacaaataccaagttgccagtttcttgttcaccacag
aggaaagggggattccttgcagccagtggtaaaccagtggcattttcatatgaagccctt
cagaaggcaaaagctctcttcagtgacatggatttcagtgcagagatcccgactgtttca
ggcacaagaaagagcgacaaacacgacgaggctcaaagtagtgcaggaaaaataagttgt
ggtttctcaactgcagggggagctaaagtcagcgtgtcacagacaaatcttctgaaagca
aagaaccttttgaaagaatttgcagatgaagaaactcgtccctcggactcgtactcaaca
agcccacgtgccacccccaagtcggatctatcaaatataaaaaatgtggaaagaagtaca
agttgtactctcaccacagcgagtgaaaaggacatgtctgctgaggaaagtgcccctgaa
gtcgttgaatcttttcagtctgtggtgactgaccctgaaaatgaaactctcagagaaaat
gctgttaaaggtgcatctgaggtaaaggaaggtaaaacgtccgtatcatgggagggcaag
ctccacgacactcttggaaaggaaacagcaaacctgttgggttgtgaagttaaacgtaca
aactgcggtgagggacccaagtccaaaaggccggaggagtcttcatatcaaatatttcca
tcacttcacttcagtggctgctctgagacccagcagaggtttctcgcccaggaagctctc
gactgcacgaaagctttgttagaggatgaaagtctctcagtgacatcagagaatgagcca
ctgcaagattacccaggatccaatgccacatctgcagaggaacagaaaggaagagggaaa
agattgggagacgatgcaaatatgactgttcagcctcccctgaaaagacgattactggac
gaattcgatcggactgttgttggtccgagaggttcaacactacatccacaaaaaacttgt
ccaaacagtgtaatgaaagacaggagagctttcaagtttcaagcctctccccatcctaac
atcacacagccacacaggaatggaaaaaactatgtggaaaccaaactgcaaaacacaaca
ccagcacaacattttacctcaggaggaagcagatcagcgcattcaaacatgccagcgttt
gttcctccattcctcaagaatgcaaagatggagacctgcaaggatgccgtgctcaaagtc
aacacaagaacacctcctgcatttgttcctcctttcaaaaaacaaagaactattgtccaa
gagagttcctgtaaaccacagcaggaggaggacaaacaccagcatctctttgtaacaccc
actaacggcagcactatcttaccgcccactaaaaaaacacaaagcagtacagatgtagct
ggtaatacaagcaaagtagatattccaccggtggccttggctgacacaaagcatgattat
ctgactgataatcacaatgttcctgttggctgtggttcaggggactctgctgcaaaggca
acacgtgaggacgacacgttttccagaggccaagacatgtttcagaatcttgaaaatgtg
gagttggcgcgggacatgcaagacatgagaatcaggaagaagaagcgccagacgatccga
ccgttgccgggtagtttgtttctaaccaaaacctcgggggtttcaaggatccctttaaaa
gctgctgcaaatggaaagctccctgggagatacacctcaaaacagctttatggatatgga
gtgcatcaacatgtgtccgacatcagcagcgagacagccgaggcttttcgcttcaatgtg
catcagttcctgaaactggaagcatttacagacggaggtggcgttcagctggccgatgga
ggatggctaatccccagcaaggatgggactgcaggaaaagaagagttttataaagcactg
tgtgacactccaggtgtggatcctaaactgatgagtgaggagtgggtgttcaatcacttc
agatggatcgtgtggaaacaagcctccatggaaagatcttttccagagacgatgggcggc
ctctgtctcacgccacagcaggttctccttcagctcaagtacagatatgatgtagagatc
gaccacagccgtagacccgctctgaggaagatcatggaaaaggacgacacatcagccaag
acccaggttctctgtatttgcggggtcgtctccaggggacactcctcaatcagaccgagt
cgcggcgacaccaagactccacaaggggccgatgccaaggtcgaacccccctctgcagta
gtttggctgacggatgggtggtacgccatcaaagctcagctggatgaacctttgactgcc
atgcttcacaaaggtcgactggctgtcggtgggaagctgatcgtctacggggctcaactg
gtgggatcgcaggaggcctgttcccctctggaggcaccggaatccctcatgttaaagatt
tacgccaacagcaccagacctgcacggtgggacaccaaactgggatttcacagagatcca
cggccgttcctgctgcctatctccagtttgtacagcaatggaggaccagtaggatgtgtg
gacattaccatactcagaagctaccccatacagtggatggagaggaaaccagatgcgggc
gttgtgtttcgttctggtcgtgcagaagagaaagaggagagacgatacagcagccaaaac
caaaagtccatggagattctttttaccaagattcaaactgaatttgaaaaagagcagacg
ggtaacaacaaacctcaacgcagaagacgcacaattaatcgtaaggatattgcaaatctg
caagatggggaggagctgtatgaagcagtggaggatgatccagcttacttggaggctcat
ttgagtgagcaacagatggagactgttcaaacctacagacgctccctgatggagaagaaa
caggctgagctacaggatcgataccgtcgggctctagaagcagagagcggtgacgggacc
tgtcccaaacgagacgtcacacctgtgtggaaactctgcgtttctgactctatgggcagt
ggcagtgtttaccagttgaatttttggcgaccctcctcagatcttcaggctctactgaag
gaaggccgtcgatacaaagtttataatctctccacttcagagggaaagaaacgcagcgga
atcgaaacggttcaactcactgggacaaagaaaacccagtttcaggacctggaggcccag
gaatggttatcagaacagtttcaaccgagggtttccaccagtttcatgaatcttcaaaac
ccagaattccagccgctgtgtggagaggttgatctcacaggatttatcatcagtatcatg
gatggacagggttcctctccggcagtttatttggctgatggagaactgaactttgttaaa
gtgcgctgtttcagcagctttgctcagtctggcctggaggatgttgtaaaaccacgtgtg
ctgttggctctgagcaacctgcagctgagaggtcagtccctgtctcccactcctgttctc
tacgctggagatctgaccgtcttctctacgaaccccaaggaggttcatctacaggaatcc
cttagccaactcagaaacctgctccagggtcagcagaacttcttcctcactgctgaggag
acacttttacatctactcaagtccgatggtctaagatccatctcttctccagctgtccac
cctctaaccccagcttgtgcaactgacatgagacaagacaccaagacaagcctgatcgct
cagcagccaatcagaagcttcggatccttcacccctgtcagcaggaatccacctgcgcca
acgtctttaacagagaaagaccccaaaagcctgaagaggacaagagctctggactatctg
tgtcgcatcccgtctccaccggctctctcccatctgggctcggtggcgactccgtgtgtg
aagaagacgttcaaccctcctcggaggtctgagacaccaagcactttaaagacagaacag
actccagctcgcaaacctgtcgtctcaccaaaggaaggtgaatgggtgaacgacgaggag
ctggcgatgattgatactcagaacttgggtgttggtgattcaatgtag
DBGET
integrated database retrieval system
