KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117772775
Entry
117772775         CDS       T07778                                 
Name
(RefSeq) coatomer subunit beta'-like isoform X1
  KO
K17302  coatomer subunit beta'
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hhip04131]
    117772775
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hhip04147]
    117772775
Membrane trafficking [BR:hhip04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    117772775
Exosome [BR:hhip04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   117772775
SSDB
Motif
Pfam: B-prop_COPA_B_2nd TPR_COPA_B WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR75_1st Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_HPS5 ANAPC4_WD40 Beta-prop_IFT140_1st NBCH_WD40 Beta-prop_IFT122_1st PEP5_VPS11_N Beta-prop_LRRK2 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_SCAP Clathrin
Other DBs
NCBI-GeneID: 117772775
NCBI-ProteinID: XP_034460114
LinkDB
Position
13:complement(25550616..25567608)
AA seq 1230 aa
MPLRLDIKRRLTARSDRVKSVDLHPTEPWMVVSLYSGAVVVWNHDTQTMVKTFELCDLPV
RVARFVARKHWLIAGSDDMQIRVFNYNTLERVHMFEAHADYIRCIAVHPTQPYILTSSDD
MLIKLWDWDRKWACSQVFEGHTHYVMQIVFNPKDNNQFASASLDRTIKVWQLGSRTPNFT
LEGHEKGVNCIDYYSGGDKPYLISGADDCLVKIWDYQNKTCVQTLEGHAQNVTCVCFHPG
LPIILTGSEDGTVRVWHSNTYRLENTLNYGMERVWCISGQRGSNSVAIGYDEGSIIIKLG
REEPAMSMDSSGKIMWARHSEVQQANLKAMGEAEFKDGERLMLGVKDMGSCEIYPQTIQH
SPNGRFVVVCGDGEYIIYTAVALRNKSFGSAQEFVWAHDSSQYATREGNNMVKIFKNFKE
KKAFKPDFGSEGIFGGFLLGVRSNNGLAFYDWETADLVRRIEIQPKHIFWSDSGELVCIA
TNESFFVLRYLPEKVSAALESKEAMAEDGVEDAFEVLGEVSEVVKTGVWVGDCFMYTSSV
NRVNYYVGGEIITIAHMDRTMYLLGYIPKDDRLYLGDKELNVVSYSLLLSVLEYQTAVMR
RDFSTADKILPTIPREQRNRVANFLEKQGFRQQALAVSTDPEHKFELALQLGELDTAYQM
ALEAESEHKWKQLAELATTKCQFTLAQECLNHAQDYGGLLLLATASGNTDMVGKLAEGAE
KDGKTNVAFLTYFMQGRLDKCLDLLIKTNRLPEAAFLARTYLPSHVPRVVRLWKESLSKV
NQKAADALADPTQYANLFPGLQQTLLAEQYLKETHVRVRPAAEYPLIMPNEDRNVLEESA
GFVSKEEASEPEEEVQSVKESFIVAAAAPPQAAAPAVEEPIPQEVTDPVSTTEEESIPSA
APPLPVAMTQEDDDTQVAGGEVAAPEPEVAAIREDTITTLEEASDPVEEDILEESIIDTT
PKEPEMVQSTPAEKVASSVVEDVQEMSQVTDAANDASDSETCITETTVEAVMATKTLAAE
DVPVNTALTIDTDEQATESAAAEEIPVCDEQEKDVLSFDEPPVTDTEAVALEAETSVTKE
EVLETAPSVVAVEELISFENTGSSVLDVPVQVETSTGFDLDPLMDPLDDTMPVLKPDPAQ
EPREEGQSTEGTEDSQEPLVSLQAESLVLTALEAPTETNVASDGPGRDEPAEELEVDMHE
EDLDDLDLDNFDLEDIDTTDINLDDELMSE
NT seq 3693 nt   +upstreamnt  +downstreamnt
atgcctctgcgattggacatcaagcggaggctgacggcccgatcggaccgggtgaagagc
gtggacctgcaccccacagagccgtggatggtggtcagcctctacagcggcgccgtggtg
gtctggaaccatgacacacagacgatggtgaaaaccttcgagctgtgtgatctgccggtc
agagtggccaggtttgtagccaggaagcactggctcattgctggatcagatgacatgcag
atccgtgtgttcaattataacacactggagagagttcacatgttcgaggcccacgccgac
tacatccgctgcatcgctgtccaccctacccagccctacatcctcaccagcagtgatgac
atgttgatcaagctgtgggactgggacagaaagtgggcctgtagtcaggtgtttgagggc
cacactcactatgtcatgcagattgtcttcaatcccaaagacaacaaccagtttgccagt
gcctctctggaccgaaccatcaaggtgtggcagctgggctcccggactcctaacttcact
ctggagggccacgagaagggagtgaactgtattgactactacagtggaggagacaaaccc
tacctcatatctggggcggatgattgccttgtcaagatctgggattatcagaacaaaacc
tgtgttcagactctggagggtcacgcccagaatgtgacttgtgtctgcttccaccctggg
ctgccaatcatcctcacaggctctgaggatggtactgttcgagtgtggcactccaacacc
taccgactcgaaaacacactcaactatggcatggagagggtgtggtgtatctctggccag
cgtggctccaacagtgtggcaattggttatgatgaaggcagcatcatcatcaagctgggt
cgggaggagcctgccatgtcgatggactccagcgggaagatcatgtgggcgcgccattcc
gaagtgcagcaggccaacctgaaggccatgggagaggctgagttcaaggatggagagagg
ctgatgctgggtgtcaaagacatgggcagctgtgagatctacccccagactatccagcac
agccccaacgggaggtttgtagtggtgtgtggagatggagagtacatcatctacactgcc
gtggccctgaggaacaagagctttggctcagctcaagagtttgtctgggcgcacgactcc
tcacagtatgccacaagagaaggaaacaatatggtcaaaatctttaagaactttaaagag
aagaaggcttttaaacctgactttggatctgaaggaatatttggtggtttcttactcgga
gtgaggtcaaacaacggtctggccttctacgactgggagacggctgacctagtccgccga
atcgaaatccaacccaaacatattttctggtctgactctggagagctggtgtgtatcgcc
acaaatgagtctttctttgtgctccgctatctgccagagaaagtgtcagcagccctggag
tcaaaagaagctatggccgaagatggtgtagaggacgcctttgaggtgctgggggaggtc
tcagaggtggtgaagacaggagtgtgggtgggagactgcttcatgtacaccagctctgtt
aacagagtcaactattatgtcgggggagagatcatcaccattgctcacatggacaggacc
atgtatctgctcggctacatccccaaggacgaccgtctctaccttggagacaaggaactc
aacgtggtcagctactccctgctgctgtctgtgctggaataccaaactgctgtcatgagg
agggacttcagcacagccgacaagattctacccacaatacccagggagcagagaaaccgg
gttgccaactttttggagaaacaaggtttcaggcagcaggccctggctgtgtccacagac
ccagaacacaagtttgaactggctctgcagctgggagagctcgacactgcctaccaaatg
gctctggaagcagagtcagagcacaaatggaagcagctggcagaactggcgaccacaaag
tgccagtttaccctggcccaggagtgtctgaaccatgctcaagattacgggggattactg
ctgctggccacggcctcgggcaacaccgacatggtgggcaagctggctgagggggccgag
aaggatggcaaaacaaacgtggccttcctcacctacttcatgcaaggacgattggacaaa
tgtctggacctcctcatcaaaaccaatcgactgccagaagctgcattcctggcaagaact
taccttcccagccatgtgccgagggtggtgcgtctgtggaaggagagtctgtccaaggtc
aaccagaaggcggcagatgctctggccgaccccacccagtacgccaacctgttccctggc
ctccagcaaaccctgctggctgagcagtacctgaaggagactcatgtcagggtcagacct
gctgcagaataccctctcatcatgccaaatgaggatcgtaatgttctggaggaatctgca
ggttttgtgtccaaagaggaggccagtgagccagaggaagaggtgcaaagcgtgaaggaa
agcttcatagtagcagcagctgcacctccacaagcagcagcaccagcagtggaggaacca
attccacaggaggtgactgatcctgtttcaacaaccgaagaagaatccattccatcagca
gctccacctcttcctgtcgccatgactcaggaggatgatgacacccaggtggctgggggt
gaggtggctgcacctgaaccagaggtggcagcaataagggaagacaccatcactacatta
gaggaggcttcagaccctgtagaggaagacatcttggaggagtccatcatagacactacc
cccaaagagccagagatggtacagtccacacctgcagagaaagtcgcatcttcagttgtg
gaggatgttcaggaaatgtctcaagtgactgatgctgctaatgacgccagtgattctgaa
acatgcatcactgagacaacagtagaggccgtcatggcaacaaaaaccttagcagccgag
gatgttccagttaacacagcattaacaatcgacacagatgaacaagcaacagaatctgca
gcagctgaagaaattcctgtttgtgacgagcaggaaaaagatgtgctctctttcgatgaa
ccacccgtcacagatacagaagcagtagcattagaagcagaaacttctgttactaaggaa
gaggttttggaaacagcaccatcagtggtcgcagtggaggagctcatctcctttgaaaac
acaggcagctcagtgctggatgtgcctgtgcaagtcgagacttctacagggtttgacctt
gatccactgatggacccacttgatgatacaatgccagtattaaagccagacccagcgcaa
gaaccaagagaagagggacagtccacagaagggacagaggacagccaggagcctcttgtg
tcgctgcaggccgagtcactggttttaacagcactagaagctcctacagagacaaacgtg
gcgtcagacgggcccggacgtgacgaaccagcagaggaacttgaggtggatatgcatgag
gaggacctggatgatctggatctggacaattttgacttggaggatatcgacaccacagat
atcaacctggatgacgagttaatgagtgaataa

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