Hippoglossus hippoglossus (Atlantic halibut): 117772837
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Entry
117772837 CDS
T07778
Symbol
smc4
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117772837 (smc4)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
117772837 (smc4)
Condensin II
117772837 (smc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
TPR_MLP1_2
AAA_15
AAA_29
Oxidored_nitro
ABC_tran
Motif
Other DBs
NCBI-GeneID:
117772837
NCBI-ProteinID:
XP_034460247
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Position
13:10353222..10370634
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AA seq
1298 aa
AA seq
DB search
MPSKTAKGSTASAKPRGKGSQPRDDSEDELDVPPQATRSNGKEEAPPTTGPSLGEAAEAA
DNRGLEEILGSIPPPPPPAMTNEPGAPRLMITHLVNRNFKSYAGEQILGPFHKRFSCIIG
PNGSGKSNVIDSMLFVFGYRAQKIRSKKLSVLIHSSDKHKDVQSCTVEVHFQKITDKEGD
DYEVIPNSKFYVSRTANKDNSSVYHINGKKATFKEVGALLRGHGIDLDHNRFLILQGEVE
QIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPIQTLARRIELLNEQRGEKLNRVKLVEK
EKNALEGERNKAVEFLTLENDIFKHKSQLCQYYVHDLHKRVVDKEQEKQKILEDTKELTE
KNTKISQEMEKMNQELKNVEKKQNKLNKYIETQKEKFTQLDLQDVEVREKIKHSKSKNKK
LQKQLEKDKEKLEEVRGVPASSEKAISEATVSKEEQEKQKVKEEEKLKEVMESLKEETSG
LQQDKETKEKELMGLSKAVNETRSRMDIAQSELDIYLSRHNTALTQLNTAKQTLQTTSDT
LRERRAAIKDLEVKIPQKEQELKKDEGELEQLMKMDNDTREVVREMRQKVDEAKSSLSSN
RSRGKVLDALMQQKKRGVIPGIFGRLGDLGAIEEKFDVAISSSCGALDNILVDTIDTAQK
CVTFLKEQNIGVATFIGLDKMKVWERNMAPIRTPEDCPRLFDMVQVKDQSVRPAFYFALR
DTLVAQDMDQATRMAFQKDKRWRVVTLRGQIIEMAGTMTGGGRAMKGRMGSSLGTEVSQE
ELDGMESKLSEKVSKLQGCQERKLQLEENIQRLRPQLRDMKNTLEKYAKSMTSLADQETH
LKRQMKELEANVIAAAPDKAKQKQMEKSLDAFKKDFEAASSKAGKVENEVKRLHNLIVDI
NSHKLKAQQDKLDKVNKELDDCSSTITKAQVAIKTAGRNLKKCEETVSRVQLELEENGKS
MAEFTEQLKKLEEEAGEVMMACQEAEAELPEVQEQYQGVLKEIKVLQQQEHALQEESLSV
RLRIEQIETTITEHNNKIKHWQKEASKLSLHTIEDKPAEELPVLTPADLEEISNPNVIIN
KMMKSETQCAQMKPNLGAIAEYKKKEELYLQRVAQLDEITTERDQFKRGYEELRKQRLNE
FMTGFNMITNKLKENYQMLTLGGDAELELVDSLDPFSEGIMFSVRPPKKSWKKIFNLSGG
EKTLSSLALVFALHHYKPTPLYFMDEIDAALDFKNVSIVACYIYEQTKNAQFIIISLRNN
MFEIADRLIGIYKTHNTTKSVGINPKTIVFKEHDAVTA
NT seq
3897 nt
NT seq
+upstream
nt +downstream
nt
atgccatctaaaactgcaaagggctccactgcctccgccaagcccagagggaaagggtcg
cagcctcgggatgactccgaggacgagctggatgtacccccacaagcaacccgctccaat
ggcaaagaggaggcaccgccgacaactggtccgtctctcggtgaggctgccgaggcggct
gataatcgaggtttggaggagattctcggtagcatccctccacccccgcccccagcaatg
accaatgaaccgggcgctcctcgcctgatgataacacatttagtcaatcgcaactttaaa
tcttacgcaggcgagcagattctggggccttttcacaagcgcttttcctgcatcattggt
ccgaatggaagtgggaagtccaatgtgatagattcaatgctctttgtgtttggatacaga
gctcaaaagatcagatcgaaaaagctctcggtgctgattcacagctctgataaacacaaa
gatgtccaaagctgtactgtggaggtgcattttcaaaagatcactgataaggaaggagat
gactacgaagttattcccaacagcaagttctatgtttccaggactgccaacaaagacaat
tcctcagtctaccatatcaatggcaagaaagccacatttaaagaagtgggggctttactc
cgaggccacggtattgacctagaccacaacagatttctgatcttacagggtgaggtggag
cagattgctatgatgaagcctaaaggtcagacagagcatgatgagggcatgctggagtac
ctggaggacattattggctcctgccgcctgaaggagcccatccaaaccctggcccgtcgc
attgagctgctcaatgagcagaggggagagaagctaaaccgagtgaagctcgtggaaaag
gagaagaatgcattggagggagaaagaaacaaagctgtggagttcctcactctggagaat
gacattttcaaacacaagagtcagctttgccaatattatgttcatgatctgcacaagcgt
gtagtggacaaagagcaggaaaagcagaagatcctggaggacacaaaggaactcactgag
aaaaatacaaagatttcacaggagatggagaaaatgaaccaagagctcaaaaatgtagag
aagaaacaaaataagctcaacaagtacattgagacccagaaggagaagttcacccagctg
gacctgcaggatgttgaagtgcgtgagaagattaaacactccaagagcaagaacaagaaa
ctgcagaagcagctggaaaaggacaaagaaaagctggaggaagtgcgcggtgtaccagcc
agcagtgaaaaggccatctctgaggcaactgttagcaaggaagagcaggagaagcagaag
gtgaaagaagaggaaaaacttaaggaggtcatggagagtctgaaagaagagaccagtggc
ttgcagcaggacaaagagaccaaagagaaagagctgatgggactcagtaaggctgtaaat
gagacacgttcccgtatggacattgctcaatcggaactcgacatctaccttagccgccac
aacacagctttgacacagctcaacacggccaagcaaactctccaaaccacctcggacact
ctgcgagagcgccgcgctgccatcaaagatttagaagtcaaaataccccagaaagagcag
gagctcaagaaggacgagggagagttggagcagctgatgaagatggataatgacaccaga
gaagtggtgagggaaatgaggcagaaggtggatgaggccaagagctctctgtcgtccaac
cgcagtcgaggaaaggtcctggatgcgctcatgcagcagaagaagaggggtgtaatccct
ggcatctttggaagattgggagacctcggagccatagaagagaagttcgatgtggccatc
tcctctagctgtggtgctctggacaacattctggtggataccattgacacagctcagaaa
tgtgtcacatttctcaaagaacagaacattggggtcgccaccttcattggtctcgacaag
atgaaggtgtgggagaggaacatggctcccattcgtactccagaggactgtcctcgtctc
tttgacatggtccaagtgaaagatcagagcgtgcgtccagctttctactttgccctcagg
gacacgctggtggcccaggacatggaccaagccacgagaatggccttccagaaggacaag
cgctggagagtggtcaccctgaggggacagatcattgagatggctggtaccatgactgga
ggaggaagagcgatgaagggcaggatgggctcttctcttggcactgaggtctcccaggag
gagctcgatggtatggagagtaagctgagcgagaaagtgtcaaagctgcagggctgccaa
gagagaaagctgcagctcgaggagaacatccagcgcctccggccgcagctccgggacatg
aagaacaccctggaaaaatacgccaaaagcatgactagtcttgctgaccaggagactcac
ctgaaacgtcagatgaaggagcttgaggctaacgtgatcgcagccgccccggacaaggcc
aagcagaagcagatggagaagagtctggatgctttcaagaaagacttcgaggcagcttct
agtaaagctggaaaagtggaaaatgaggtgaagaggctccacaacctgattgtagacatc
aacagccacaagctaaaggctcagcaggacaagcttgacaaggtcaacaaggagctggac
gactgctcctccaccatcaccaaggcccaagtagccattaagacagctggccgcaacctg
aagaagtgtgaggagactgtgagtcgtgtgcagcttgagctggaggagaacgggaagtca
atggccgagttcacagaacaactgaagaagctggaagaggaggctggggaggtcatgatg
gcctgtcaggaggcggaggcggagcttcccgaggtgcaggagcagtatcagggggtgctg
aaggagatcaaggttctgcagcagcaggagcacgctctgcaggaggagtccctcagcgtc
cggctccgcatcgagcagatcgagacgaccatcaccgaacacaacaacaagatcaaacac
tggcagaaagaggccagcaagttgtcccttcacacgattgaagacaaaccagcagaggaa
cttcctgttctcactcctgccgaccttgaagaaatctctaatcccaatgtcatcatcaac
aagatgatgaagtcagagacgcagtgcgctcagatgaagccaaacctcggcgccatcgct
gagtacaagaagaaggaggagctgtacctgcagcgagtggctcagctggacgagatcacg
accgagagggaccaattcaagcgcggctacgaggagctgcgcaaacagcgactcaacgag
ttcatgaccggattcaacatgatcacaaacaagctgaaggagaactaccagatgctaacg
ctgggcggggacgcagagctggagctggtcgacagcttagatcccttttctgagggcatc
atgttcagtgttcgtcctccaaagaagagctggaaaaagatctttaacctgtcgggagga
gagaagacgctgagctctttggctctggtgtttgctctgcaccactacaaacccacaccg
ctctacttcatggacgagatagatgctgctcttgatttcaagaacgtctccattgttgcc
tgttacatttatgaacaaacaaagaacgctcagttcatcatcatctctctgaggaacaac
atgttcgagatcgcagatcgcctcatcggcatctacaaaactcacaacaccaccaagagc
gtgggaatcaaccccaagaccatcgtgttcaaggagcatgatgccgtcactgcttaa
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