Hippoglossus hippoglossus (Atlantic halibut): 117772949
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Entry
117772949 CDS
T07778
Symbol
ube4a
Name
(RefSeq) ubiquitin conjugation factor E4 A
KO
K10596
ubiquitin conjugation factor E4 A [EC:
2.3.2.27
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117772949 (ube4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117772949 (ube4a)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
117772949 (ube4a)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
U-box type E3
117772949 (ube4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
117772949
NCBI-ProteinID:
XP_034460452
LinkDB
All DBs
Position
13:complement(13073082..13083901)
Genome browser
AA seq
1077 aa
AA seq
DB search
MTDQGNNNQNISCNPFAALFSSLADAKQFASGQKPEQQSAEPPLEDSGESQSDSENSVSD
SVDENDDSVAEISRSFRSRQELCEQLNVNHMIQRIFLITLDNSDPSLRGGNGIPPRCVYL
EEMAADLDGQDWLDMDNIEQALFNRLLLLEPGNHLIYMTSCSAVNLSADRDAGEKCAIPY
LFACYQRAKEEVTKVPEKLLSFAVRCKNLTVSNTRTVLLTPEIYISQNIYEQLFDLLLEG
FNGAQSEEVVEFVEEVTAGLLSDQEVRTFEEVIVPVFDIFHGRIKDMDLCQPLLYSYLDV
LLYFSHHKDIAKVLMEYIQPKDPANGLQYQKSLLGTVLSISCLLRTPGVVEGHGYFLNPS
RSSAQETKVQEANIHQFMGQFQDKLHQILKNLLQRSGETRHLLLSWLGNCLQANAGRAKI
WANQMPEIFFQMYASDAFFLNLGAALLKLCQPFCRPRSPKLLTFNPTYCGLKELSEEERR
NRNVHAKGLDKETCLVPLPPQQPVESAQSYSLLTENLILTQLTQHLGFHRLHEQMVKMNQ
SLHRLQVTWQEAQRSGNPMSEQLLEQFERLMIVYLSTKAATTQPAMLQCCLNLQASTAAL
LVQLGMGNQGPEHVALSFPLPLLQNTVLCYVPEFFAENMGDFFIFLRRFADDVLETSAES
LEQILNFITVFMGNVERMKNPHLRAKLAEVLEAVMPHMEPVTTGAAQPILFQRERVFSSY
KYAPQLAEALISVFVDIEFTGDPHQFEQKFNYRRPMYPILKYMWSKDSYRESIKHLADYA
SVNLEAMNPPLFLRYLNLLMNDAIFLLDEAIQYLSKIKVLQLERDRGEWEGLAADARREK
ESSLQMFGQLGRFHNIMSNETIGTLAFLTSDIKGIFVHPFLAERIISMLNYFLQHLVGPK
MGALKVKDFSEFDFKPQQLVSDICTIYLNLGDEENFCVTVPKDGRSYSPILFSQTVRVLK
KINKPGDMIVGFGVLADKIKSHADRQQQEEETYADAPDEFLDPIMSTLMLDPVLLPSSNV
TVDRTTIARHLLSDQTDPFNRSPLTMDQIRPNEDLKQQILQWLDRHKQESLQLGPSG
NT seq
3234 nt
NT seq
+upstream
nt +downstream
nt
atgactgaccagggcaacaacaaccagaacatctcctgcaaccccttcgctgccctcttc
agctcactggctgatgctaaacagtttgcatcaggccagaaaccggaacagcagtcggct
gaaccaccactggaggactccggggagagccaatcggactcagaaaactctgtgtcagac
agcgttgatgaaaatgacgactctgtggcagagatcagtcgctcattccgctcccgacag
gagctgtgtgagcagctcaatgtcaatcacatgatccagcgcatatttctcatcactctg
gacaacagtgatcccagtctgagaggaggtaatgggatcccccctcgttgtgtgtacctg
gaggagatggctgcagatctggatggacaggactggctggacatggacaacatagagcag
gctctgtttaaccgcctgctgctgctagagccaggaaaccacctcatctacatgacatca
tgcagtgctgtgaatctatctgcggaccgcgacgctggagagaaatgtgccatcccttac
ctttttgcttgttaccagagagccaaagaagaggtgacgaaggtaccagagaagttactg
tcgtttgctgttcgttgtaagaatctgacggtttctaacacacggacagttctgctcacc
ccagagatctacatcagccagaatatctacgagcagctctttgacctgctgctggaaggt
ttcaacggagcccagtcagaagaggtggttgagtttgtggaggaggtaactgccggcctg
ctctctgaccaggaggtgcgtaccttcgaggaggtgatagtaccagtgtttgatatcttc
catggacgcatcaaagacatggacctctgtcagcctctcctctactcctacttggatgtt
ctcctgtacttcagccaccataaagatattgctaaggtactgatggaatacattcagccc
aaagacccagccaatggtttgcagtaccagaagagcctattggggacagtgctgagtatc
tcctgcttgttaagaaccccaggtgtggtggagggacatggctatttcctgaacccctcc
cgctccagtgcccaggagacaaaggtccaggaggccaacattcaccagtttatgggccag
tttcaagacaagctgcaccaaatcttgaaaaacttgctccagagatctggtgagacgcgt
caccttctgctctcgtggctgggcaactgtctgcaggctaacgctggacgggcaaagatc
tgggccaatcagatgccagagatcttcttccagatgtatgcttcagatgcattcttttta
aacctgggtgctgcccttctgaagctgtgccagcctttctgcaggcctcgttcgcccaaa
ctgctcaccttcaaccccacctactgcggcctcaaagagctgagcgaagaagagaggcgc
aatcgcaatgtgcacgcaaaaggtctcgacaaggaaacctgtctggtccctctgccccct
caacagccggtggagtctgcacagtcctacagcctgctgactgaaaacctcatcctcaca
caactcacacagcatctaggattccacagactccatgagcagatggtgaagatgaaccag
tctctccaccggctccaggtgacgtggcaggaggcccagcggagtggcaacccgatgtcg
gagcagctccttgagcagtttgagcgtctgatgattgtgtatctgtcaaccaaagctgcc
actacgcagcctgctatgctgcaatgctgccttaacctccaagcttccaccgctgctctg
ctggttcagcttggaatgggaaaccaggggcctgaacatgtagcactcagtttccccctg
cccctgctgcagaatactgtgctctgctacgtaccagagttttttgcagaaaacatggga
gattttttcatctttctgcggcggtttgcagacgatgttttggaaacttctgcagaaagt
ctggagcagattctcaacttcatcaccgtcttcatgggtaatgtggagaggatgaagaac
ccacacttaagagccaagcttgcggaggtcttagaggcggtgatgccacacatggagcct
gtgactactggtgctgctcagccaatcctgttccagcgagagagagtcttctcttcctac
aaatatgcacctcagctggccgaggccctcatcagtgtgtttgtagacattgaattcaca
ggggatcctcatcagtttgaacagaaattcaactacagaaggcccatgtatcccatcctc
aagtacatgtggagcaaagatagctacagagagagcatcaagcacttggccgactatgca
tctgtgaacctggaggccatgaacccccctctgttcctcaggtatctcaacttactgatg
aatgatgccatcttcctgctagatgaggctattcagtacctgagtaaaatcaaagttctg
cagctggagcgggatcgaggggagtgggaaggcctggcagccgatgcccgaagagagaaa
gagtcgagcctgcagatgtttggacagctgggacgcttccacaacatcatgtctaatgag
accatcggcacactggcctttctcacctcagatatcaaggggatctttgtgcaccccttc
ctggctgagaggatcatctcaatgctgaactacttcctgcagcacctggtgggtcctaag
atgggcgcccttaaagtcaaggacttcagtgagttcgacttcaagccccagcagcttgtt
tctgatatctgcaccatctacctgaacctgggggatgaggagaatttctgtgttacagtc
ccaaaggacggccggtcgtactctcctatcctcttttcacagactgttagggtactgaag
aagatcaacaaacctggtgacatgattgttggttttggagttcttgctgataaaataaag
tcccatgcagataggcagcagcaggaagaggagacatatgcagatgctccagatgagttc
ttggaccccatcatgtccactctgatgctggatcctgtgcttctcccctcatccaacgta
acagttgatcgcacaactatagcaaggcatctccttagtgaccagacggaccctttcaac
cgcagtcctctcaccatggaccagatcaggccaaacgaggacctcaaacagcagatttta
cagtggctggataggcataagcaggagagcttgcagctgggacccagtggctag
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