Hippoglossus hippoglossus (Atlantic halibut): 117773212
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Entry
117773212 CDS
T07778
Symbol
lsamp
Name
(RefSeq) limbic system-associated membrane protein isoform X1
KO
K06772
limbic system-associated membrane protein
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117773212 (lsamp)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
IgLON family
117773212 (lsamp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
V-set
Ig_VEGFR-1-like_5th
Ig_5
VEGFR1-3_N_Ig-like
V-set_CD47
C2-set_2
Ig_PDGFR_d4
Izumo-Ig
ZK512_Ig
Ig_MYOM1
Ig_C17orf99
Sp38
Ig_IgSF3
DUF5503
Motif
Other DBs
NCBI-GeneID:
117773212
NCBI-ProteinID:
XP_034460821
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Position
13:23978622..24585969
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AA seq
337 aa
AA seq
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MQPGRKSCWRQLQASFFRLLCLIPTGFPVRSVDMQRATDNITIRQGDTAIIRCYVDDKVS
KVAWLNRSNIIFAGQDKWSLDPRVDLVTKGQLEYSLRIQKVDVYDEGSYTCSIQTKQQPK
TSQVYLIVQVPANIYKVSEDIIVNEGSNVTLSCLANGRPDPAITWRLLNPSAEPLDGEEY
LDIIGIMRNQAGRYECKASNDVATPDVKYVNMVVNYPPTIKKTQSSETQVGRMGTLQCDA
TAVPTPEFEWYRDEKRLSNAQGINIQILGTTTILMLANVTEEDYGNYTCVASNRLGVQNA
SLFLYRPGTGRDINGAACVSRSLWLLLASIACLFFKC
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgcaacccggacgcaaatcgtgttggaggcaattgcaggcgtcttttttcagactgcta
tgtcttatccccacaggattccccgtccggagtgtggatatgcagcgggccaccgacaac
atcaccatccgccagggcgacacggcgatcataaggtgttacgttgatgacaaagtgtcc
aaggtggcctggctcaatcgatccaacatcatctttgccggccaggacaaatggtccctg
gaccccagagtagatctggtcactaaaggacaactggagtacagcctgcgcatacagaag
gttgacgtctatgatgagggctcatacacctgctccatacagaccaagcagcagcccaag
acctcacaggtctacctcatcgtacaagttcctgccaacatctacaaagtgtcagaggac
atcattgtgaatgagggcagtaatgtgacactcagttgtttggccaatggcagaccagac
cctgcaatcacctggcggctgctcaacccttcagcagagccgctggacggagaagagtac
ctggacattataggtatcatgcgaaaccaggcgggtcgttacgaatgcaaggccagcaac
gacgtcgccacgccggatgtcaaatacgtcaatatggttgtgaactatcctccgacaata
aagaaaacccagagctcagagactcaggtgggccgcatggggacgctgcagtgtgacgcc
accgctgtgcccacaccagagttcgaatggtacagggacgaaaaaaggctgtccaatgcc
cagggcatcaatatccaaatccttggcaccaccacgattctcatgcttgccaatgtcacc
gaagaggattatgggaactatacctgtgtggcctcaaaccgactgggcgtccagaatgcc
agccttttcctctatagacctgggacaggtcgagatatcaacggcgccgcctgcgtttct
cgatcactgtggctcctgctggcctccatcgcctgcctttttttcaagtgttaa
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