Hippoglossus hippoglossus (Atlantic halibut): 117773272
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Entry
117773272 CDS
T07778
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04517
IgSF CAM signaling
hhip04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117773272
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
117773272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
hhip04812
]
117773272
Cytoskeleton proteins [BR:
hhip04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
117773272
Intermediate filaments
Intermediate filament-binding proteins
117773272
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
Helical_needle
PH_4
Motif
Other DBs
NCBI-GeneID:
117773272
NCBI-ProteinID:
XP_034460922
LinkDB
All DBs
Position
13:complement(1873394..2624210)
Genome browser
AA seq
2700 aa
AA seq
DB search
MANASPDLDNAEAQRQLNNNNRPISSGFWETECTSSKLFECSRIKALADERDAVQKKTFT
KWVNSHLARVSCRISDLYNDLRDGYMLTRLLEVLSGELLPRPTRGRMRIHCLENVDKALQ
FLKEQRVHLENVGSHDIVDGNHRLTLGLMWTIILRFQIQVIKIETEDNRETRSAKDALLL
WCQMKTAGYPEVNIQNFTTCWRDGLAFNALIHRHRPDLIEFHKLTRSNATHNLQQAFNIA
EQNLGLTKLLDPEDVNTENPDEKSIITYVVSYYHYFSKMKALIVEGKRVGKVLENCVEAE
KIINRYEALASDLLDWIEKTIAIISNQKFANSLTGVQQQLQAFTTYCTIEKPIKFQEKGN
LEVLLFTIQSKLRANNQKPYVPHDGKLISDINKAWERLEKAEHERGVALRKELIRQEKLE
LLAQRFDHKTTMRQAWLNENQRLVSQDNFGYDLPAVEAAMKKHEAIEADIASYEERIGVV
VELAAEMETEGYYDIRRILARKENILGQWALLKELVAGRRTRLEKNLAMQKTFQDMVYMI
DWMEDIQVQLLSKDFGKHLLEVDDLLQKHSLQEADIAVQAERVETLNTAALKFTTIEGYQ
PCDPQVICNRVNHVSSCLEELKQLAVKRHAELEESRQLWAFFQELEESEAWIREKSSILG
AQGYGKDLSSVLRLLQKHKTLAGELLAHRSLLQNTMKRGKQILSEKSFGTAGIQERIMEV
KGEWKQLEDQAAQRLEHLQEALHFFQFSTETDDLVVWLQDAYRLVSSEDFGHDEYSTQSL
LKKHRGVSEAVDKHRMHVVTLRKHMVALPLRYRDQEEVQVRMAEVEQLYTEVAEVAVLRQ
QWLHDALAVYHMFSEVNACELWIDEKEQWLDKMEIPERLEDVEVVAHRFESLDQEMNSLM
GRILDVNQIVQQLLDGCHPSSTEVRGCQDHLNSRWNSIVELVEQKKDQLDAMLRLQNYLL
ECAEIKSQIQDKRKAIDSTQYVGSDLGGVLALQRRLSTMEGALSVLEPKLMHLQEEAEHL
ASVHSGRTMDVLVPFDGISLEWEELKRTLQGCEDSLLVAGRLQSFIQDLDSFLTWLVQTQ
TAAASDQLPNDLEEAEKLINKHAALKEEIGRYEEDYERLQAMNELLESEEAPLPHAALQQ
WLQKLDVGWNKLLEMWESRREVLVQAHIFHLFLRDVKQAESFLNNQESALAHVELPATVE
TVEAAIKKHKDFTTTMELNLHRIKAVIEAGESLISQSNIYSDRIRERIDTLANRGNQNRE
LAQRWLEKLNDQWELQRFLQDCHELGDWVYEKMLMARDSSRDETQKLHKKWLKHQAFMAE
LAQNKEWLDKIEREGQQLIQEKPELSPVVRRKLEEIRECWQDLESTTQAKARQLFEANKA
DLLVQSYESLDQRLGQLEGQLAYVDQGQDLTTVNKQLKKLQTMETQMEAWYQEVGQLQVQ
AASIPQQTQIKGTVAERQAVVEARMVRLIEPLKERRRILLASKEVHQVGRDLEDEILWIQ
ERLPMAMSQEHGCSLQSVQQLMKKNQTLQRELQGHMSRIDDVLERAGIIASIRSPEADCV
RAGHDQLAYLWALLWAETERRQLVLDAMYQAQQYYFDTAEVEAWLSEQELHMMNEEKGKD
EPSTLQLLKKHLVLEQTIEDYAETIGLLSQQCRQLLEMGHPDCEQISKRQSQIDRLYVSL
KDLVEERKSRLEQQYWLYQLNREVDELEQWIAQREVVASSPELGQDYEHVTVLQEKFTEF
ASETGSVGQERVTAVNQMVDELIDYGHSDAATIAEWKDGVNEAWADLLELIETRAQMLAA
SHQLHKFFSDCREVLAQIEDKHRRLPEVRARQGSTANTSTLQRLLHSFEQDIQLLVTQVR
QLQESAAQLRTVYAGEKAEAIACREHEVMQFWKELLTSCEECRVQITTETDKLRFFSMVR
DQIMWMDSIICQIGAGEKPRDVSSVEVLMNYHQSLRGEIEARSRSVLKCIEMGKTLLAVR
NPAAEEIKEKLDKVVAKQQELSEKWDKHWEVLQQLLEVHQFAQEAVVAEAWLTAQEPFIT
SCELGASVDEVEQLIRRHEAFRKAAATWEERFSSLRRITTVEKLKAEQSKLPPTPLLGRK
VFLDPQDAAPSQLTLSRIPLSPVMRQTIYEQNEASSPPSPSPATPTPSPSSVVRRLGSTV
APYTPVMNGSTYRHTLEARHGGVVGVAAGLGQPAPSSIASIATAAMLVSANQAREGVSTA
REHATKAMTHLQPVQAAKELEVKSSPYLRQPKIKHMDDIVTPLIVASRLEKVRERGRERE
MMMGEICTEKVEMAVMAEVVLQEPGRERLHSEPTRGPRGSRSDPLGHAEPQVQTHREHKI
ERQLSSEQLIQARRDELPQEVWREHAERRDKRTLERQTSSEHEAPGGHEGRRRERDRNRL
ERQESSEHETAKEQSDRRSAGGAREEKRSTMAEIVEQLQEREAAQARGEVPRLPNGLPEK
SSRPDRPRARDRPKPRRRPRPKEAGEATTRRSRSAPAQSSPAVPQPPAHTAHQEGFLFRK
LDIESLKKSTNSRSWVNLYCVLNKGEMGFYKDAKNTATAYNNEPMLNLSHCHCDVTNGYK
KKKNVFTLKTKDGSEFLFHAKDEDDLKAWVTNITASITEHEEIAKWGQPQPTTSSTDEGT
RRDGSKADNRSERGGERSDRGDRIERADKEKERDRGDRSERSDRGGKSEAKRSEKSGKKK
NT seq
8103 nt
NT seq
+upstream
nt +downstream
nt
atggccaatgcctccccagacctggacaacgcggaagcccagcgccagctcaacaacaac
aaccgaccaatcagctccgggttctgggagacggagtgcacgagctccaagctgttcgag
tgctcccgcatcaaggccctggcagatgaacgagatgcggtgcagaagaagacttttacc
aagtgggtgaactcacatctggccagagtgtcctgtcgtatatctgacctctacaacgac
ctgagagatggatacatgctcacccgactgctggaggtgctcagtggagagctgctgccg
agaccgactcggggacgtatgcggatccactgcctggaaaatgttgacaaagcgctgcag
ttccttaaagagcagagggttcacctggaaaatgtcggttcccacgacatcgtggacgga
aaccaccgtctcaccctgggcctcatgtggacaattattctacgcttccagatccaggtg
atcaaaatagaaacggaggacaacagagaaactcgctctgccaaggacgctctgctgctc
tggtgccagatgaagaccgcagggtaccctgaggtcaacatccagaacttcaccacctgc
tggagagacggcctcgccttcaacgccctcattcacagacacagacccgacctgatagag
ttccacaagctgacgcgctccaatgcaactcataacctgcagcaagccttcaacatcgca
gagcagaacctgggcctcaccaagctgctggaccccgaggatgtaaacacagagaaccca
gatgaaaagtcgatcatcacctatgtggtctcctactaccactacttttccaagatgaag
gctcttattgtggagggcaagagggtcggcaaggtactcgagaactgtgtcgaagccgag
aaaatcatcaaccgctacgaagccctggcgtcagacctgctggactggatcgagaagacc
atcgccatcatcagcaaccagaagtttgccaactcgctgaccggagttcagcagcagctt
caggccttcacgacctactgcaccatcgagaagcccatcaagtttcaggagaagggaaat
ctcgaggttcttctcttcaccatccaaagcaaactcagagccaacaaccagaaaccctat
gtgcctcatgacgggaagctgatctcagacatcaacaaggcctgggagaggctagagaag
gcggagcatgagaggggtgtggccctgcgcaaggagctgattcgtcaggagaagttggaa
ttgctggctcagcgctttgaccacaaaaccaccatgagacaagcctggctcaacgaaaac
cagaggcttgtatcacaggacaatttcggctacgacctgccagcagtcgaggcggcaatg
aagaaacatgaggccatagaagcggacatcgcctcatatgaagagcgaatcggagtggtg
gtggaactcgcagcagagatggagacggaaggatactacgacatccgacgtatcttggct
cgtaaggagaacatcctggggcagtgggctctgctgaaggagctggtggccgggaggagg
acccggctggagaagaacctggccatgcagaagacctttcaggacatggtttacatgatc
gactggatggaggacatacaggtccagctgctgtcaaaggactttgggaaacatctcctg
gaggtggacgacctgctgcagaaacacagcctgcaggaggcagacatcgctgtgcaggct
gagagggtggagacgctcaacacagctgcgctcaaatttaccacgatagagggttaccag
ccgtgcgaccctcaggtgatctgtaaccgggtcaaccacgtgtcttcctgtctggaggag
ctcaaacaactggcagtgaaaagacacgctgagctcgaggagtccagacagctctgggcc
ttttttcaggagctggaggagtcggaggcttggatcagagagaaaagctccatcctggga
gctcagggctacgggaaggacctgagcagtgtgctgaggctactacaaaaacacaagact
ctggctggagaactgctggctcaccggtcgctgctgcagaacaccatgaagagagggaag
cagatcctgagcgagaagagcttcggcaccgcggggatccaggagcgcatcatggaggtg
aagggggagtggaagcagctggaggaccaggcagcgcagcgtcttgaacacctgcaggag
gcgctccactttttccagttctccacggagacagacgacctggtggtctggctgcaggac
gcttaccgcctggtctccagcgaagactttggacatgacgagtactcaactcagtccctg
ctgaagaagcacagaggggtcagcgaggctgtcgacaaacatcgaatgcatgtggtgacg
ctgcgcaaacacatggtggcgctgcctctgcgataccgtgaccaggaggaggtgcaggtt
cgtatggccgaggtggagcagctgtacaccgaggtggctgaggtggccgtgctccgacag
cagtggcttcacgacgccctcgccgtctaccacatgttcagtgaggtcaacgcctgcgag
ctgtggattgatgagaaggagcagtggctggacaagatggagatccctgagaggctggag
gacgtggaggtggtggcacacaggtttgagagtctggaccaggagatgaacagcctgatg
ggaaggatcctggatgtcaatcagatagttcagcagctcctggatggatgtcatccgtct
tctacagaggtcagaggttgtcaggaccatctcaactccaggtggaacagcatcgtggag
ctggtcgagcagaagaaggatcagctggacgccatgttgcgtctgcagaactacttgctg
gagtgtgcagagatcaagtctcagatccaggacaagagaaaagccatcgactccacccag
tacgtgggcagtgacctgggaggagtcctggctctgcagagacgcctctccaccatggag
ggagccctgtctgtgctggagcccaaactgatgcatctgcaggaggaggcggagcatctg
gcctcggttcattccggtcggaccatggatgttctcgtaccgttcgatggcatcagcctc
gagtgggaggagctgaaacgcaccctgcagggatgcgaggactcgctgctggtggccggc
cggctgcaaagcttcatacaggacctggactcgttcctcacctggttggtccagacccag
acggccgctgcctccgaccagctgcccaacgacctggaggaggccgagaaactcatcaac
aaacacgctgccctgaaggaggagataggacgatatgaagaggactacgagcgcctgcag
gccatgaacgagctgctggagtccgaggaggcccctctgcctcatgccgctctgcagcag
tggctccagaagctcgatgtcggctggaataaactgctggagatgtgggagagcaggaga
gaagttctggtccaggctcatatcttccatctgttcctgcgagacgttaaacaggctgag
tccttcctcaataaccaggaatcggccctcgcccacgtggagctgcccgccacagtggag
acggttgaagccgccataaagaaacacaaggacttcaccaccaccatggagctgaacctg
caccggatcaaagctgtgatcgaggccggcgagagtctgatcagccagagcaacatctac
tccgatcgcatcagggaacgcatcgacaccctcgccaacaggggaaaccagaacagagag
ctggctcagcggtggctggaaaaactgaatgaccagtgggaactgcagaggtttctccag
gactgtcacgagctgggggactgggtgtacgagaagatgctgatggcgagggacagcagc
cgagacgagacccagaagcttcacaagaaatggctgaagcaccaggccttcatggccgag
ttggcccagaataaagagtggctggacaaaatcgagagggagggccagcagctgatccag
gagaagccggagctcagtcccgtggtccggaggaagctggaggagatccgggagtgctgg
caggatctggagagcaccacccaggccaaggcccggcagctctttgaggccaacaaggcc
gacctgctggtgcagagctatgaaagcctggaccagaggctgggccagctggagggtcaa
ctggcctacgtggaccagggacaggacctcaccaccgtcaacaagcagctgaagaaactg
cagaccatggagacccagatggaggcgtggtaccaggaggtggggcagctccaggtgcag
gcagcctccataccacagcagacgcagatcaaggggacggtggcggagcgtcaggccgtc
gtggaagccaggatggtgcgtctcatcgagccgctgaaggagcggcggcgcatcctgctg
gcgtcgaaggaagtgcaccaagtcggacgagacctggaggacgagattttgtggatccag
gagcgcctcccgatggccatgtctcaggagcacggttgttcgttgcagtccgtccagcag
ctcatgaagaagaatcagactcttcagagggagctgcagggccacatgagcaggattgac
gacgtcctggagagggcgggaatcatcgcctccatacgcagccccgaggcagactgcgtc
agggcgggccacgaccagctggcctatctgtgggctctgctctgggccgagaccgagagg
aggcaactggtcctggacgccatgtaccaggcccagcagtactacttcgacacggccgag
gtggaggcctggctgagcgagcaagagctgcacatgatgaacgaggagaaggggaaggac
gagcccagcaccctgcagctgctgaagaaacacttggtcctggaacagaccatcgaggac
tatgctgagaccatcggccttctgtcgcagcagtgccggcagctgctggagatggggcat
ccggactgcgagcagatcagcaagcgccagtcgcagattgaccgtctgtacgtgtccctg
aaggacctggtggaggagaggaagagccgcctggagcagcagtactggctctaccagctc
aatagagaggtggacgagctggagcagtggatcgctcagagggaggtggtcgccagctcg
ccggaactgggtcaagactacgagcatgtgacagtcctgcaggagaagttcacagagttt
gcatcagagaccggcagcgtggggcaggagcgagtgacggccgtcaaccagatggtggac
gagctcatcgactacggccactcggacgccgccaccatcgcggagtggaaggacggcgtg
aacgaggcctgggccgacctgctggagctcatcgagacccgggcacagatgctcgccgcc
tcacatcagctgcacaagttcttctccgactgccgagaggttttggctcagattgaggac
aaacatcgaagactgccagaagttcgggctcggcagggcagcactgccaacaccagcacc
ctgcagagactcctgcacagcttcgaacaggacatacagctgctggtcacgcaggtgcgt
cagctgcaggagagtgcggcccagctgaggacggtgtacgccggcgagaaggccgaagcc
atcgcgtgccgtgagcacgaagtgatgcagttttggaaggagctgctgacgtcctgtgaa
gagtgtcgagtgcaaatcaccaccgagacagataaattgaggttcttcagcatggtccga
gaccagatcatgtggatggactcgatcatctgtcagataggggcgggagagaagcccaga
gatgtgtcctcagtggaggtgctgatgaattatcaccagagtctgagaggcgaaatcgag
gctcgcagtcggagcgttctcaagtgtattgaaatgggaaagaccctgctggctgttcga
aaccctgcagctgaagagattaaggagaagctggacaaggtggttgctaagcaacaagag
ctgtctgagaagtgggacaagcactgggaagtcctacagcaactgctcgaggtccatcag
ttcgcccaggaggcggtggtggccgaggcgtggctgacggctcaggagccgttcattacc
agctgcgagctgggcgccagtgtggatgaggtggagcaactgattcgtcgacatgaagcc
ttccgcaaagccgctgccacctgggaggagcggttcagctccctacgacgaatcaccacg
gtagagaagttgaaagcagagcaaagtaaactccccccaactcctctgctgggtcgtaaa
gtcttcctggacccccaagacgccgccccgagtcaactcaccctctcccgcatcccgctc
tcccccgtcatgagacagaccatctatgaacagaacgaagctagctcccctccctcgccc
tcccctgccactcctacaccctctccttcttctgtggttcgtcggctggggtcgacagtc
gccccctatacccctgtgatgaatggctccacctaccgtcacaccctggaggcacggcat
ggtggcgtggtgggtgtggcagcaggactaggccagcccgcaccttcctcaattgcatct
attgctacagccgccatgctagtctcagccaaccaggcgcgagaaggcgtcagtacggca
agagagcatgcgacgaaagccatgactcacctccagccagtgcaggcagcaaaggaactg
gaggtgaaatcgtctccgtatctgaggcagcccaaaatcaaacacatggatgacatagtg
acgcctctgatcgtggccagccggctggagaaggtgagggagagggggagggagagagag
atgatgatgggagagatatgtacagagaaagtggagatggcggtgatggccgaggtggtg
ctccaggagccgggtcgggagcgtctgcatagcgagcccaccagaggcccccgggggtcc
aggagtgacccgttgggccacgccgagccccaggtccagacacacagagaacacaagata
gaacggcagctgtccagcgagcagctgatccaagcgcgcagggacgagctgcctcaggag
gtgtggagggaacatgcagagaggcgggacaagcggacattagagagacaaacgtccagc
gagcacgaggcccccgggggccacgagggccggcggagagagagggaccgcaaccggctg
gagagacaggaatccagtgagcatgaaactgcgaaggagcaatcagacagacgctcagca
ggaggagcgagagaagagaagagatccaccatggcagaaattgtagagcagctgcaagaa
agagaagcagcacaggcccgtggcgaggttccccgcctccctaacgggttgccagagaag
tcttcccgtcccgaccgaccccgagctcgggacagacccaaaccacggcggcgaccacga
cccaaagaggcgggagaggcgacgacgcggcggtccaggtccgctccggctcagagcagc
ccggcagttccccagccgccagcgcacaccgcacaccaagagggcttcctgttccgcaag
ctggacatcgagagtctgaagaagagcaccaacagcaggtcatgggtcaacctgtactgc
gtgctgaacaaaggggagatgggtttctacaaggatgccaagaataccgccacggcctac
aacaacgagccgatgctcaacctctcccactgccactgcgacgtcaccaacggatacaag
aagaagaagaacgtcttcacactcaaaacgaaggatggcagcgagtttttgtttcatgct
aaagatgaggacgacctcaaagcgtgggtgaccaacatcaccgccagtattacagagcac
gaggagattgccaaatggggccagccccaaccaactacctcatccacagacgagggcacg
cgccgcgacggcagcaaggcagacaaccggtcagagcgaggcggcgagcgctcggaccga
ggcgaccggatcgagagggcagacaaggaaaaggagagggaccgaggcgataggtcggag
aggtcagatcgaggtgggaagtcggaagcgaagcgctcagagaagtctggtaagaaaaag
tga
DBGET
integrated database retrieval system
