Hippoglossus hippoglossus (Atlantic halibut): 117773278
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Entry
117773278 CDS
T07778
Symbol
rsf1a
Name
(RefSeq) remodeling and spacing factor 1 isoform X1
KO
K11657
remodeling and spacing factor 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
117773278 (rsf1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hhip03036
]
117773278 (rsf1a)
Chromosome and associated proteins [BR:
hhip03036
]
Eukaryotic type
Chromatin remodeling factors
RSF complex
117773278 (rsf1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHD
WHIM1
DDT
Motif
Other DBs
NCBI-GeneID:
117773278
NCBI-ProteinID:
XP_034460940
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All DBs
Position
13:complement(1961767..1974710)
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AA seq
1481 aa
AA seq
DB search
MAAPAVVRSSGPALCPSFAEVCSFLERYGATLDLPEMTFPQMERYLRDTTAVPKPLVELH
VKLLRKLGRSVTTDRWEKYLAKVCQELNSTWAWELEQKGYQDMSMECKSSILKYLCECQF
DDNLKFKMAINEEDPEKMRLQPIGRDQQGLMYWLQFDHEQNIRLYTEEQDDLDGSTWQCI
VRTRNDLAEALDLLKAQISPALNQEQDQNQAGSRSNSPTEKGAGDEVIGSTDPEPSKTTE
EPAESKTLDPIKEEKPLIPELKEEQMQSIEGENTDAEVKEKTTDHKPPVFDNRVSTITTI
VKSESRESDAPKNAVSVVMAPGTTVIKQEVNKEEEAGRAVVRSNQQAKIPLKKRELKLAE
SYQSSHLNNSSSSIIVCNPSVIQSKDRREGKLLNSVAPPCGPSMPQQQQLVVSAAKQELT
NGRASVLLPHKDGQNGVIGVIGQVGVIGHIGVIRSPSERHRAPGAEQQEPNGPSVDHWSS
RVVEEEREVSRQSVLVRKGPVEGDTSASAASTLPLLVAKEAQTPEKLLMTSSKSDQAPKA
VEREVDAVSISSLSQSTEEPKRQTTEDLCKKATEEPSEKGTESGPSSLHQKDDDVDEREG
RRGEVSGAEEGSKDYNEKSKSALGKMEAESGGAVPPLKVEQRDENDHLDPQGDGVNDELA
AQVRVKDTGLRSEGKQGPLEEASSELQKEGIRLKIKIPPHRRNKLRKGGKEGEKEREQEA
QDEGRQLRRSTRICRSSALPTCRPSSKVAESQRKKPQKKQALASRTREEEEEEEEEEEEE
EQSSATKKAIKAEVAGQIRKRRGKRRHRRPRWSNIRSKRRKLNEGTEVEDRGTKREDEES
EGGSDSEESCKSEEIPSEDACSHCGLPNHPELILLCDSCDSGYHTACLRPPLMLIPDGEW
FCPPCQHKLLCEKLEEHLLNLDSALKKKDRAERRRERLVYVGISVENIIPEGDGEEEEKS
TKKKDPKKSKNLGRRSTRTRKHISYRFDDFDDAIDEAIEEDITDLCAVGTERSKDITPIL
SEDRKESQRPIRSQAHSVRSRKKRRLNDLESDSTAAESEDEFMLSNSSEDEEFGASGADD
DEEEDEDAGSEVGSWDSATRPKRPLRGVPKQRPSKTQRRGRKRQRRRRRHSSEEEEEETE
EEMDSDQYSDMSDSDADKKRRGLRRGQRQQVNYRETSESSDNSKASASKNKVKPRGRPRK
EHLSSDFSDVSRSSRDSGDEEDYEDEDEDDQRRRVNRRRKEEKDQWRNRMKEKRRRHRDK
EDDRERGRRLKRKLLEKEEDKRRRLKRTDREEEDMEKMGRGKRREILSEQRRRRLAQMLK
KRRPSTDDDDEEESEESESSSEEDRPVRKRLNRIDSDDDDDKKEEEEEEEEEEEEEEGRQ
KVTTKKSSAVERRSDSEAQEKGRGRSLSPSNIHRTSRGPVKPGDGSPTVPRDSEASGQQG
KLNGPFLPDQEEEEEEEEEEKEEEEGGQTDSLNSVQNSPQS
NT seq
4446 nt
NT seq
+upstream
nt +downstream
nt
atggctgctccggcggtggtgaggagctccggcccggcgctgtgcccgagcttcgcggag
gtctgttcgttcctggagcggtacggagcgacgctggatctgcccgagatgactttcccg
cagatggagcggtatctgcgggacacgacggcagtccctaaacccctcgtggagcttcac
gtgaagctgctcagaaaacttgggaggtctgtaacgacagaccgctgggagaagtacctg
gctaaggtttgccaggagctgaacagtacttgggcgtgggagctggaacagaagggctac
caggatatgtccatggagtgcaagtcgagcatcctaaaatatctgtgcgagtgtcagttt
gatgacaacctgaagttcaagatggcgattaatgaggaggacccagagaagatgcgtctg
cagccgatcggtcgggaccaacagggcctgatgtactggcttcagttcgaccacgagcag
aacatccggctgtacacggaggagcaggacgatctggacggatccacctggcagtgcatt
gtcaggactcgtaacgatctggctgaagctctggacctgttgaaggctcagatcagtcca
gccctgaatcaggagcaggaccagaaccaggctggatccaggagcaacagccccacagag
aaaggtgcaggggatgaggtaataggaagcactgacccagaaccctccaagaccacagag
gaacccgctgagagcaagacgcttgaccccataaaggaagagaaacccctcataccagag
ctaaaggaggagcagatgcagtcaatagagggggagaacacagacgctgaggtaaaagaa
aagacgacggaccacaaaccccctgtgttcgataatcgggtcagcaccatcaccaccatt
gtcaaatctgaatccagggaatccgacgcccccaaaaacgctgtgtcggttgtaatggca
ccaggcacgactgtgataaaacaggaagttaacaaggaagaggaggctgggcgggctgtt
gtcaggagcaaccagcaggcaaagataccactgaagaagagggagctgaagctcgcagag
agctaccagagcagccaccttaacaacagcagcagcagtattattgtttgtaacccctca
gtgatccagagcaaggacagaagagaggggaagttacttaactcagtagcacccccttgt
ggtccctctatgccacaacagcagcagttagtggtcagtgcagcgaagcaagaactgacg
aatgggagagcgtctgtgctcctgcctcacaaagacggacagaatggagtcataggggtc
ataggtcaagtcggtgtaataggtcatataggggtcatccgcagtccgtccgagcgtcac
agagcccctggcgctgagcaacaggaaccaaacgggccaagtgtagaccactggagctcc
agagttgtggaggaagagcgggaggtgagccggcagtcagtgctggtgaggaagggacct
gttgaaggtgacacgtcggcctcagcagcctccactctccctcttcttgtggcaaaggag
gctcaaacacccgagaagctgctaatgacatcttcaaagtctgatcaagcccctaaagct
gtggagagagaagtggatgctgttagcatttcttcactgtctcagtccacagaggaaccc
aagagacagacgacagaagacctgtgcaaaaaagcaacagaggaaccatcggagaagggg
acagaaagtgggcccagcagtcttcaccagaaagatgatgacgtggacgagagggagggg
aggagaggagaagtgtctggggcagaggaaggaagtaaggattacaatgaaaagagtaag
agcgctttggggaagatggaggcagaatcagggggcgccgttcctcctctaaaagttgaa
cagagagatgaaaatgaccacctggacccccagggagatggggtcaatgatgagctggct
gcccaggtcagggttaaggacactgggctgcggtcagaggggaagcagggtcccctggag
gaggcatcctccgaactccagaaagaaggaatcaggctgaagattaagattcctcctcac
aggagaaacaagttaaggaaaggtggaaaagagggggagaaagagagggagcaggaggcc
caagacgaagggaggcagctgaggagatcaaccaggatttgcagatcatctgctttgcca
acctgcaggccgagctcgaaggtggcggagagccagaggaagaaaccacaaaaaaaacag
gcactggcctccagaacaagggaagaagaggaggaggaggaggaagaagaggaagaagag
gagcagagctcagctacaaagaaagccataaaagcagaagtggctgggcaaattagaaaa
cgaaggggcaaacggaggcatcgacgcccccgatggtccaacatccgttcgaagagacgt
aagctgaatgaggggacggaggtggaggacagagggacgaaacgagaagatgaggagagc
gagggagggagcgactcagaagaatcttgtaaatcagaggagattcccagtgaggatgcc
tgtagtcactgtggcctgcccaaccatcctgaactgatcctgttgtgtgactcttgtgac
agtggataccacaccgcctgtctgcgtccaccgctcatgttgattccagatggagagtgg
ttctgtccgccctgtcaacataaactgttgtgtgagaaactggaggagcatctgctgaat
ctggacagtgccctgaagaaaaaagacagagcagagaggaggagagagcgtctggtgtat
gtgggaatcagtgtggagaacatcattcctgagggagacggggaggaggaagagaagtcc
acaaagaagaaagaccccaaaaagagtaaaaatctgggccgaagatcgacaagaaccagg
aaacacatcagctacaggtttgacgactttgacgatgcgatcgatgaggctatcgaggaa
gacatcactgacctctgtgccgtaggaaccgagcgcagcaaagacatcactcccatccta
tcagaggacaggaaggagagccagcggccaatcagaagccaagctcattctgtcaggagc
aggaagaagaggaggctgaacgacctggagagcgacagcacggcagcagagagtgaggat
gagttcatgctcagcaacagctctgaggatgaagaattcggtgcatcgggggcagatgac
gatgaggaggaagatgaagatgccggcagcgaggtgggcagctgggacagtgcgacccgc
cccaagcggccgttgagaggggtgcccaaacaacgacccagcaagacccagcgcaggggg
aggaaacgacagaggcggcggcggagacactcctccgaggaagaggaggaagaaactgaa
gaagaaatggactccgatcagtacagtgacatgtccgacagtgatgctgataaaaagagg
cggggcctgaggcgcggccagcggcagcaggtcaactaccgcgagacgtccgagtcgtcg
gacaactccaaggcctccgccagcaagaacaaggtcaaaccccgcgggcggccgcgcaag
gagcatctctccagcgacttcagcgatgtgtcgcgttcttccagagactccggggacgag
gaggattatgaagacgaagacgaagatgaccagagacggagggtgaacaggaggagaaag
gaggagaaagaccagtggaggaacaggatgaaggaaaagcggaggagacaccgagacaag
gaagacgacagagagagagggaggcggctgaaaaggaaactgctggagaaggaggaggac
aagcggaggagattaaagaggacagacagagaagaggaggacatggagaagatgggcaga
ggaaagaggagagagattctgtcagagcagcggcgccggcgactcgctcagatgctgaag
aaacgacggccttcgacggacgatgacgacgaggaggagtctgaggagtctgagtcgtca
tcggaagaggatcgtcccgtccgcaaaagactcaaccgcatcgactcggatgatgatgat
gataagaaggaggaggaggaggaagaagaggaagaggaagaggaagaggaggggagacag
aaggtgacgaccaaaaagtcttcagcagtcgagaggaggtcggacagcgaagctcaggaa
aaggggaggggccgtagcttgtctccgtcaaacatacatcggacctccagaggcccagtg
aagcccggggatggaagtcccacagtacccagggacagtgaagcttcaggccagcagggc
aagctcaacggccccttccttccagaccaggaggaggaggaggaggaggaggaggaagaa
aaggaggaggaggaggggggccagacagactcattaaactctgtccagaacagtccgcag
tcatga
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