Hippoglossus hippoglossus (Atlantic halibut): 117773314
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Entry
117773314 CDS
T07778
Symbol
atg13
Name
(RefSeq) autophagy-related protein 13 isoform X1
KO
K08331
autophagy-related protein 13
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04136
Autophagy - other
hhip04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
117773314 (atg13)
04136 Autophagy - other
117773314 (atg13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117773314 (atg13)
03029 Mitochondrial biogenesis [BR:
hhip03029
]
117773314 (atg13)
Membrane trafficking [BR:
hhip04131
]
Autophagy
Autophagosome formation proteins
ULK complex
117773314 (atg13)
Atg1 complex
117773314 (atg13)
Mitochondrial biogenesis [BR:
hhip03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
117773314 (atg13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
117773314
NCBI-ProteinID:
XP_034461025
LinkDB
All DBs
Position
2:6279509..6286880
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AA seq
534 aa
AA seq
DB search
MDSDLSPQDKKDLDKFIKFFALKTVQVIVQARLGEKICTRSSSSPTGSDWFNLAIKDIPE
VTHEAKKALAGQLPGIGRSMCVEISLKTSEGDSMELETWCLEMNEKCDKDIKVSYTVYNR
LSVLLKSLLAITRVTPAYKLSRKQGHDYVILYRIYFGEVQLNGLGEGFQTVRVGVVGTPV
GTVTLSCAYRTNLAFMSSRQFERSAPIMGIIVDHFVDPPCGSQRPANMGHPCNYRAPDDE
DGGPYAGVQDSQEVCTTSFSTSPPSQCVCTLSPSPSKLPKPLPLDSLQLPLAPGLVTHTL
YASRLSYHPPTLAGAADLCHPAANPNQVLHAVREGGVMLVPAYPHGTDTHLTAEHAPHTP
GSSGDDDGLLHSDEGRSASPFDPVESLNAFTRKVGAFVSKPATQLTAASLDLPFAAFAPR
GLDSEENDPMVQPPDSPPCPSPLQASLHSQGSEGSGQQDDFVMVDFRPAFSKDDLLPMDL
GTFYREFQNPPQLASLSLHISSQSMADDLDSLPEKLAVYEKNIDEFDAFVDMLQ
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgacctaagtccccaggataaaaaggacttggacaagttcatcaagttcttt
gccttgaagactgttcaggtgatagtccaagcccgactcggtgagaaaatctgcactcgc
tcttcctcatcccctacaggctcagactggtttaatttggccatcaaagacataccagag
gtgactcatgaagccaagaaagcgctggcgggtcaactgccaggcatcggacgctccatg
tgtgtcgagatctccctgaagacatcagagggagactcaatggagttagagacttggtgc
ctggagatgaatgaaaagtgcgataaagacatcaaggtgtcatatactgtgtacaaccgt
ctgtctgtgcttctgaagtctctgctggccatcaccagagtaacacccgcctataaactg
tccagaaagcagggacatgactatgtcatattatacaggatttattttggagaagtccag
ctgaatggattaggggaaggttttcagacagtgcgtgttggtgtcgttggaacccctgtt
ggcacagtcacactttcatgtgcctaccgcaccaacctggcatttatgtctagcaggcag
tttgagcgctccgctccgatcatgggcattatcgtggatcactttgtggatcctccctgc
ggcagccagcgtcctgcaaatatgggtcacccctgcaactacagagctccagatgacgag
gacggaggaccgtatgcaggagttcaggattcacaggaggtctgcaccacctccttctcc
acctcccctccctctcagtgtgtgtgcacactgagtccgtctccctctaaactgcccaag
cccctccctctggacagtctgcagcttccattggctcccggacttgtcactcacactctt
tatgcttccagattatcctaccatcctccaactctagcaggagctgctgatctttgtcac
cccgctgccaatcctaaccaggtattgcatgctgtgagggagggcggggttatgctggtt
cctgcctatcctcatggaacagacacccacctgacagccgagcacgccccccacacccct
ggcagcagcggcgatgatgacggtctgttgcacagcgatgaagggaggagtgcttctccc
tttgacccggtggagtctctcaacgcgttcacgaggaaagtcggagcgtttgtcagtaaa
cccgccacacagctaacagcagccagtctggacctgccatttgctgcattcgctcctcga
ggcctggactcggaggagaatgatcccatggtgcagcccccagactcccctccctgcccg
tcccccctgcaggccagccttcactctcagggctcggagggatcggggcagcaggacgat
ttcgttatggtcgactttagacctgccttctctaaagacgacctgttgccgatggatttg
ggcaccttctacagagagtttcaaaatcctccacaactggccagtctctctctacacatc
agctcgcagtcgatggccgatgacctggactctctgccagagaaactggcagtctacgag
aaaaacatcgacgagttcgacgcatttgtggacatgctccagtag
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