Hippoglossus hippoglossus (Atlantic halibut): 117773373
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Entry
117773373 CDS
T07778
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
117773373 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hhip04121
]
117773373 (trip12)
Enzymes [BR:
hhip01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
117773373 (trip12)
Ubiquitin system [BR:
hhip04121
]
Ubiquitin ligases (E3)
HECT type E3
117773373 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
117773373
NCBI-ProteinID:
XP_034461119
LinkDB
All DBs
Position
13:complement(15739804..15765297)
Genome browser
AA seq
2069 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPQDHTVAGRLQSEQVKHKANSPPESRRPNSKASKAT
ASTATGQSRGHNSRRSGLTLSVASFVLQDDPEAAGTSEQERPGHQSKSEGTRGLKRSEAP
DQIITFGPTPAKKPKSLPPPRDNTSETKKGPAKSKKRSIASEPPASSGRGQSKKSGPTGA
SPIPKRKKVDSLPGLSSTAGSLPNRTEGRTAKPTKLASKSAASAKAGCSNVTDSSSSAST
SSSSSTTGTNSATTQGARVKQGKDQTKARRSRSASSPSPRRSTRDKEQAKSASSSKFEWA
ARFNPKVNLPKPKLSLPGSSKTETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSFRRS
TRQKTTGSCASTSRRGSGLGKRGAADARRQEKMADSDNNQDGANSSAARTDEASQGASAS
SSVAGAVGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASS
KAQQLLQGLQATGDESQQLQAAIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFD
IMNHASRALTYMMEALPRSSAVVVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKA
ILQAGGLADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDK
KSVESTCLCFARLVDNFQHEENLLQEVASRDLLTNIQQLLVVTPPVLSSGMFIMVVRMFS
LMCSNCPCLAVQLMKQNIAETLRFLLCGASNGSCQEQIELVPRSPQELYELTSLICELMP
CLPREGIFAVDVMLKKGSAQTTEGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISL
STLGRVYTIDFNSMQQINEDTGTARGIQRKPNPLANPNTGSHQEVRREDARAQLMKEDPE
LAKCFIKTLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLRNHSVSSHIAS
MLSSQDLKIVVGSLQMAEILMQKLPDVFSVYFRREGVMHQVKNLAESETFLVTSPPKACP
SGTASLCTTTISTASTTSANNATPDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRG
PRRPKYSPPRDDDKVDNQDNPPTLPGFFTAKSPTSTQSPKSSFLASLNPKTWGKLGAQTN
NANSEPSRTAGVSGLARAPPKDSISNNRDKIKAWIKEQASKFVERFFNSENVDGSNPALN
VLQRLCTATEQLNLQVDGGMECLSEISSIVSESDVSSFEIQHSGLVKQLLVYLTSNTDRE
LLTRDVRLKRFLHVFAGCPVPGMEPVGRLDPTGNGPYLGLVHKMNSCLSQMEQFPVKVHD
FPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCTNVKQWKGGPVKIDPLALVQAIERYLV
VRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNSGSVRHRLQFYIGDHLLPYNMTVYQAV
RQYSLQAEEERESTDDEANPLGRAGIWTKTHTIWYKPVREDEDGSKDAVGGKRGRAQTAP
TKTSPRNAKKQDELWHDGVCPSVVNPLETYLTPEPPETITFDDPSLEVNLLLRVLHSISR
YWFYLYDNAVCKEIIPTTEFINSKLTAKANRQLQDPLVIMTGNIPTWLIELGKTCPFFFP
FDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTINRDELLKQAE
SVMQDLGSSRAMLEIQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGS
QEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMKFRFLGKLMAKAIMDFRLLDLPLGLPFY
KWMLRHEMSVSSHDLVNIDPSVAKSIQHLEDIIRQKKRLEQDRSQTRETLQQALESLNMN
GCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIYNLEEYLRLVVYWTLNEGVSRQFESFRE
GFESVFPLHHLQYFYPEELDQLLCGSKSETWDVKTLMECCRPDHGYTHDSRAVRFLFEVL
SSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYL
KLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6210 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacact
gctgcggcccagccacaagaccacacagttgcgggaaggttgcagtcagagcaagtaaaa
cataaagcgaattccccacctgaaagtagaagacctaattctaaggcttccaaagccaca
gccagcacagccactggccagtccagagggcacaactcaagaagaagcggtcttactctg
tccgtggcttcatttgtgttgcaagacgacccagaggctgcagggacctccgaacaagaa
agaccaggccaccagtcaaagagtgaaggcacccgggggctaaagagaagcgaagctcct
gaccaaattattacctttggaccgaccccagccaagaaacccaaatcgctcccaccaccc
agagacaatacctcagagaccaagaaaggcccagcgaagtctaagaaaagatcaatagcc
tcagaaccacctgcatcatcaggtcgaggtcagagcaagaagagcgggcccactggggcc
tcaccaatcccgaaacggaagaaagtggactctctccccggtctaagtagcaccgctggg
tccctccccaatcgtacggagggcagaactgcaaaacccaccaagctggcgtctaaatca
gccgcctcagccaaagctgggtgtagcaacgtgacagactcctcctcctctgcctccacc
tcttcctcttcatcaaccacaggcaccaacagcgccaccactcagggcgccagagtcaaa
cagggaaaagatcagaccaaggcacgtcgctctcgctcggcctcaagcccctccccacgc
cgtagtacccgtgacaaggagcaggccaaatctgccagctcttctaaatttgagtgggca
gcacgcttcaaccccaaagtaaacctgccaaaacccaaactgtccttgcccggatcttcc
aaaactgagacctccaaacctgggccatcaggattacaagctaaactagcaagtttgagg
aaatccactaagaagcgcagcgagtctcctccagcagagctccccagctttcggcggagc
acacgccagaagaccacgggctcctgtgccagcaccagtcggcggggctcaggcctaggc
aagcgcggggcagccgacgctcgccggcaggagaaaatggccgactctgacaacaaccaa
gatggggccaactcctcagccgctcgcactgatgaggcatcacaaggggcttcagcttca
agctcagttgctggagcagtgggcatgaccacctctggagagagtgagtctgatgactct
gaaatgggaagacttcaagccctactggaagccaggggactccccccacatctttttggg
cccttgggaccccgcatgtcacagctgtttcacaggaccataggcagtggagccagctcc
aaggctcagcagttactgcagggcctgcaggccacaggtgatgagtctcagcagctccaa
gctgctattgagatgtgccagctgctggtgatgggtaatgaagagacacttggtggattc
cctgttaagagtgtggtgcccgccttgattacactgttacaaatggagcataactttgat
attatgaatcatgcctctcgtgcactcacatatatgatggaggcattgcctcgatcctct
gctgtggtggtcgatgctattcctgtcttcctggagaagcttcaggtgatccaattcatt
gacgtagcagagcaggcactgactgccttggaaatgttgtcaaggcgacacagcaaagcc
attttgcaggctggtgggctcgctgactgcctcctttacctagagttctttagcatcaat
gctcagaggaatgccctggccattgcagccaactgctgccagagcattactccagacgag
ttccactttgtagctgattctctgccactgttgacacagagactcacacaccaggataag
aaatccgtcgaaagcacttgtctctgtttcgccagactggtggacaactttcaacatgaa
gagaacctgctgcaggaggtggcgtcacgggacctgttgaccaacattcagcagctgctg
gttgtgacccctcctgtgctcagctcggggatgttcatcatggttgtgcgcatgttctct
cttatgtgctctaactgcccctgcctggcagtccagcttatgaaacagaacatagcagaa
actctacgtttcctcttgtgtggtgcgtcaaatggcagctgccaggaacagattgagctg
gtacctcggagcccacaggagctctacgaactgacctcactcatatgtgagctgatgccc
tgcctgccgagagaaggcatatttgccgttgacgtaatgctgaagaagggtagtgcccag
actaccgaaggcgcgatctggcagtggagggatgaccgaggactgtggcacccttacaac
cgcattgatagccgcattattgagacagcgcaccagaacggggaggatgagattagtttg
tcaactcttggccgtgtgtacacaattgacttcaactctatgcagcagataaatgaagac
acaggaacagcacgtggaatacagaggaaaccaaatcctctcgccaaccccaacacaggg
agtcaccaggaggttcgtcgagaagacgcacgagcccagttgatgaaggaggaccctgaa
ctggcaaagtgctttatcaaaactctgtttggggtcttgtatgaggtgtacagctcgtcg
gctggccctgctgtcagacacaagtgccttagagccatcctcaggatcatctactttgct
gatgcagagctgttgaaggatgtgctgaggaaccattctgtgtccagtcacattgcctcc
atgctgtccagccaggacctgaagattgtagtgggttctctgcagatggctgagatcctc
atgcagaagctacctgatgtcttcagtgtctatttcagaagggaaggtgtaatgcaccag
gttaagaacctggcagagtctgagacctttctagtaacaagtccccctaaggcttgccca
agtggtactgccagtctgtgcaccaccaccatcagcacggcatctaccacatctgctaat
aatgcaactccagaccttggctcgcccagcttccagcacagcatggacgactcactggac
ctcagcccacaggggcggttaagtgatgtcctaaagaggaaacgactacctaaaagaggg
ccgaggagacccaaatactctcccccaagagatgatgacaaagtagacaatcaggataac
cctcccactctgcctgggttctttacagctaagagcccaaccagtactcagtcacccaaa
tcatccttcttggccagtctcaatcccaagacctggggcaaactgggtgcccagaccaat
aatgccaactcagaaccctcacgcacggcgggggtgagtggcttggcaagggcccctcca
aaggactcaatatcaaataacagagacaaaataaaggcctggatcaaagaacaggcgagt
aagtttgtggagcgcttcttcaactctgaaaatgtggatggcagcaaccctgcactgaat
gtactccagagactttgcacagccactgagcagctcaacctgcaggtggacggtggtatg
gagtgcctgtcggagatctccagtattgtatcggaatctgatgtgtcatcatttgagatc
cagcacagtgggctggtgaagcagctcttggtttacttgacctccaacacggacagggaa
ttgctgactcgtgacgtgcggctcaagaggttcctccatgttttcgctggctgtccggtt
ccaggaatggagcctgtcggtcgtctagacccaacagggaatgggccttacctgggcctg
gtgcacaagatgaacagctgtctgagccaaatggagcagttccctgttaaagtgcatgac
ttccccagtggcaacggcaatggcagcaggggatctcaggcactgaagttcttcaataca
catcagctgaagtgtcagctgcagagacacccagactgcactaatgttaaacagtggaaa
ggaggcccagtgaagatagacccactggctctggtgcaagccatcgagagatatttagtt
gtcagagggtatggccgaatcagagaagaagacgaagacagtgatgatgatggttcagat
gatgaaatcgatgaatcactggcggcacagttcctgaattctggcagtgtgcgtcacaga
ctacagttctacatcggtgaccacctgctaccatacaacatgactgtataccaagctgta
cggcagtacagtcttcaggcagaagaagaaagggagtcgacggatgatgaggccaacccc
cttgggcgagctggcatctggaccaaaacgcacacaatatggtataagcctgtgagagag
gatgaagacggcagcaaagatgctgtgggtggaaagaggggccgagcccagactgctccc
accaaaacctcacctcgcaacgccaagaagcaggatgagctgtggcatgatggtgtgtgt
cccagcgtcgtcaatcccttagagacatacctcactccggagccaccagagaccataacc
tttgatgacccctctttagaggtcaacctgctgctgagggtcctgcactccatcagtaga
tactggttctacttgtatgataatgctgtgtgtaaggaaatcatcccgaccactgagttc
attaacagtaagctgacagccaaagccaaccgtcagctacaagacccactggtcatcatg
acggggaatatccctacatggctcatcgagcttggaaagacctgtcctttcttcttcccc
tttgacacccggcagatgttattctatgtaactgcctttgaccgcgacagagccatgcag
cgcctactggatacaaaccctgagatcaaccaatcagattctcaggacagcagagttgca
ccacgtctggacaggaaaaagaggacgataaaccgcgacgagctgctcaaacaggctgag
tctgtgatgcaggacctcggcagctccagggcaatgttggagattcagtatgagaacgag
gttggcacaggtcttggcccaactctggagttctacgctctggtgtctcaagagctgcag
cgggccgacctcggtctgtggaggggagaagaggtcactctggccaatcctaaaggaagc
caagagggaactaagtatatgttcagctccagaggactgtttgcggttccctttggcagg
acaaccaaaccagcacacatagccaaaatcaaaatgaagttccgtttcttaggaaagcta
atggccaaagccattatggacttcagactgctggacctgcccctgggtctgccgttttac
aagtggatgctacgacatgagatgtcggtaagctcccatgatctggtgaacattgacccc
agtgtggccaagtccattcagcacctggaagatattatccgccagaagaagaggctggag
caggaccgatcacagacgagggagaccctgcagcaggcattagaaagcctgaacatgaac
ggctgctcagtagaggacctgggtttggacttcaccctcccaggattcccaaacattgag
ctgaaaaagggcggcaaagacgtcccagtcacaatctacaacctggaggaatacctcagg
ttggtggtgtactggactctaaatgaaggagtgtccagacaatttgagtcgtttagggaa
gggtttgagtcagtcttccctttacatcacctgcagtatttctatccagaggagcttgac
cagttgctgtgtggcagtaaatcagagacgtgggacgtcaagacactgatggagtgctgt
cgaccagaccatggctacacacatgacagccgtgcagtccggtttctgtttgaggtgttg
agcagtttcgatgccgagcagcagagactcttcctgcagttcgttacaggaagccccaga
ctgcctgtcggaggtttccggagcctgaatccccctctgacgatcgtgaggaagaccttc
gagtcgacagagaacccagacgacttcctcccctcagtcatgacctgcgtcaactacctg
aagctgcctgactactccagcatagagatcatgcgagagaaactgttgattgcggcacgc
gagggccagcagtcgttccacctttcctga
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