Hippoglossus hippoglossus (Atlantic halibut): 117773438
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Entry
117773438 CDS
T07778
Symbol
igsf5b
Name
(RefSeq) immunoglobulin superfamily member 5 isoform X1
KO
K06786
junctional adhesion molecule 4
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04517
IgSF CAM signaling
hhip04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
117773438 (igsf5b)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
117773438 (igsf5b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
hhip04515
]
117773438 (igsf5b)
Cell adhesion molecules [BR:
hhip04515
]
Immunoglobulin superfamily
CTX family
117773438 (igsf5b)
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Ortholog
Paralog
GFIT
Motif
Pfam:
C2-set_3
Ig_3
C2-set_2
I-set
ig
C1-set
Ig_2
DUF4131
ATP1G1_PLM_MAT8
RL10_C
TMEM154
Motif
Other DBs
NCBI-GeneID:
117773438
NCBI-ProteinID:
XP_034461249
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All DBs
Position
13:13531399..13550756
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AA seq
370 aa
AA seq
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MMVLHLLVLLLSCGIQAAGAQMKLYPETLTVLRGEEARFTCSASNTKWTVMLWLLNGTAA
VTISKLHGVLQSPITNVTAEPVSGSKRDSWVFVLNSTERYNQGQVTCDLQGIDRKTANLF
VQEKGIVKVSGDDKLAFKGKSVIFECRAAGWYPEPSLYWQVNDKKVSQAEYNISSEESGK
SLFTVSSNLSVMAAKSSEVDCLVSVSALTTPLKSGVRLTVVAEVVQEDDDCTVPLAVTAS
LSALLLLLLLGICIVLCYRQRRQANPSPKEPSWFDQSVVGRGVVAEVTRGTDNLGYSKEG
PTDHKLGKTSGPDADYNELIMEIRRQMDFASFHKVPDVVYFSSPSLHSESQGPASTSEEN
PVNVRRITTV
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcttcatctgttggtgctgctactttcctgcgggattcaagcagctggagct
cagatgaagctgtacccagaaacactgactgtcctgcgaggggaggaggctcggtttacc
tgcagcgcctccaacaccaagtggaccgtgatgttgtggctgctgaacggcacagcggcg
gtcaccatctcgaagttgcacggtgtcctgcagtcccccatcactaatgtgacagctgag
ccagtctccggctccaagagagacagctgggtgtttgtcctgaacagcacagagaggtac
aaccagggacaagtgacctgtgaccttcagggcatcgacaggaaaacagcaaacctgttc
gtacaagaaaagggcatcgtcaaagtctcgggggacgacaagttggctttcaaggggaag
tcagtgatatttgaatgccgagcagcaggatggtatcctgaacccagtctgtactggcag
gtgaatgacaagaaggtgagccaggctgaatacaacatcagcagtgaagaatcggggaag
agcctcttcactgtgagcagcaacctcagtgtgatggcggcaaagagctctgaagtggat
tgtctggtctccgtgtctgccctcaccacgccactgaagagcggcgtccgtctgacagtg
gttgcagaggtggtgcaggaagatgatgactgcacggtcccgctggcagtgactgcctcc
ctctctgctcttctgctgctcctcctgctcggcatctgcattgtcctctgctacagacag
aggagacaagcaaatccaagcccaaaggagccttcatggttcgaccaatcggtggttggg
agaggagtggttgctgaggtgacaagagggactgataacctgggatactctaaagagggt
cccacagatcacaaactaggtaaaaccagtgggccagacgcagattacaatgagctaatc
atggaaattcgtagacagatggactttgccagttttcacaaggtccctgatgtcgtgtac
tttagcagcccgtctctgcacagtgagagccaaggcccggcgagtacgtcagaggaaaac
cctgtgaacgtcaggaggattaccacagtttga
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