Hippoglossus hippoglossus (Atlantic halibut): 117773450
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Entry
117773450 CDS
T07778
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
117773450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117773450
Membrane trafficking [BR:
hhip04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
117773450
Endosome - Golgi transport
Arf GTPase associated proteins
117773450
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
117773450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGAP
PH
ArfGap
SAM_1
RA
SAM_2
PH_11
PH_6
PH_8
PH_3
PH_9
Motif
Other DBs
NCBI-GeneID:
117773450
NCBI-ProteinID:
XP_034461298
LinkDB
All DBs
Position
13:complement(16285116..16332935)
Genome browser
AA seq
1603 aa
AA seq
DB search
MSQSECCADVWDWLCVLRLEQYSEAFRNAGLATLRQCRNLTPDQLERMGITLPGHQRRIL
ASLNKTHGNRDTQSDTHSQPLMSEREQRSEETGHAKVLHRERPVPLPVEEKPIFKQTERE
DGETSKPTPREREKPVPKERQVSRMKEENEGGGKKSVPEQRQTAPGQSKEEEGDGGVDGD
REKPVPKERTKFRSSAPVDCPPGPRVSPMSDPPLPPVPPRSTPNCPPQCFTSALSPSPPA
RTPISPKLDRRDVTAPAAPSVSRCLTPTRTPTHTSTQTRPQTLAIQPAAQHLVIDGGIKM
SPVSPIAPQSHDRNAPPLPPKAGGVPKGPPPIRQRVPAQSPRAHSASPTKTVTDEMQKDQ
TPQVPPRIRTPQTQENAQHSTQPDAQLRVSRPSCEFSQNSLDDSSDEYEDPDFINPIVHS
MKTPERDMSLQIPGGIKGRYNSFCSDDEQLDDEDSSQWHDSGLSTVQGSVYLPATGRRAS
ACQEDSSQHAAVIKMGWLDKNPPQGALYYQRRWVKLDVDYLRYFENDKDVYSKGIISTAY
ITNVTSVGELKFEVATNNRTFIFRAESEAERNDWVTVLQDCNRGRHRRNTMSPGLLLTPD
YQGYLELKGLRSKLYTVIASDKVYLYKHIDDFRIGVGITSIEMNVGNVKDSERRNFDLTT
PYRIFSFIAESDQLREQWVDAMRNAIGEALSNSEVADRIWVESSNSVCADCGTPKPEWAA
INLCVVICKRCAGEHRGLGPSISKVRSLKMDRKVWTEELIQVFLLLGNERVNSFWAANIP
PSEALMPSSCSEERRRFITNKYRQGKYRKYHPLYGNQRELNNALCINVQCTDVLETLSLI
FCGADVNCSTGVASWPSPLSLANAHSQLLQAELLSHNLNTELPQSHVDGAMEAVHYSAPP
CVSHNGFLFKTASMARAISERKGKEEFSRRWCVLNDGTFSYYESDKNSNPNGALKASEIV
CLAVDAPEKHGYENTFELYSESERLYLFGTDDPDGHKEWVKSIARNFIPASAEPLLRLGF
ERIGRLKCKDGLNLQTSKVGWFALVGSTLHAHLENGQGEEIHLRKLNELSIQQDNEVLVL
VEKGRTLYIEGERKLDFSGWCTAIQTAAGSGGDTLGQQQLTETDIPVIVHSCIGYITQCG
LTSEGIYRKSGVNSRVAALLERFRRDARSVHLREGEHQVDDVSNTLKRFFRELEEGLFTS
EDASTWLSTAAIQDESKKISQYQLLLDSLPRVNKATLQALINHLYCVQRFSELNQMNLHN
LAIVFGPTLFQTDGKDYTAGRAIEELIEHYTLIFEVDEQQLKKQLEEITVIIQVREKLST
KFPSTEPGGHFICTVYLEEKKNTAEQHVKIPGSMTAAELTCEVLDRRNIPVKDKEYWSCW
EVSNKEEMERPLHHLERVLPILHSFGTDSHLLIKKHLAMEAMILYLTSKVDASKHGMMKF
REERSILGLGLTSGSFHDRYFILNSNSLRMYKEVRSNRPERDWPVKNLKVYLGIKKKVRP
PTCWGLTVVCESVKQERPERQQWYLCCDTQTEMREWFATFLSIQYDGNVWPQDGLKLTRV
SRVLPDTRHGNVSLIPLRGSENEMRNSVAAFSQDALALFRDVR
NT seq
4812 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagtctgagtgctgtgcagatgtgtgggactggttatgtgtacttcgtctggag
caatactctgaggcatttcggaacgccgggctggcaacattgcggcagtgtcgcaacctc
acaccagatcagctggagcgaatgggcatcaccctgccgggtcaccagagacgcatcctg
gccagcttgaacaaaacacatggtaatcgtgacacacaatctgacacgcacagtcagcct
ctaatgtctgagagggagcagcgatctgaggaaacaggacatgctaaagtgttacacaga
gagagacctgtacctctccctgtggaggaaaaacctatctttaagcaaacggagagagaa
gatggagagacatcgaaacctactcccagagaaagagagaaaccagtccctaaggagaga
caagtgtccagaatgaaagaggaaaatgaaggaggagggaagaagtcggttcctgaacaa
agacaaacagcacctggacaaagcaaagaagaagagggggacggaggggtagatggagac
agggagaaacctgtgcctaaagagaggactaagtttcgctctagtgctccagtggactgc
ccccccggccctcgtgtctctccaatgtctgacccccctttaccccctgtccccccacgt
agcacccccaactgccctccacagtgctttacgtctgccctgagcccctcacctcctgct
cgtacccccatctcccctaaactagacagacgtgatgttacagctccagctgcaccgagc
gtgtcccgctgtttaacccccaccagaacccctacccatacttctacacaaacccggcca
cagacattagccattcagccggctgcccaacatctggtaatcgatggagggataaaaatg
tcacctgtttctcccattgctcctcaaagccacgacagaaatgctcctcctctccctcca
aaagcggggggagtacctaaaggccctccaccaatccggcagagggttcctgcacagtct
cccagagctcacagtgcctctcctaccaagacagtcacagatgagatgcagaaagaccaa
actccccaggtcccccctcgaataaggacaccccaaactcaagaaaacgcacaacattca
actcaacctgacgctcagctgagggtctccagaccttcctgtgaattcagtcagaactca
cttgatgatagctctgatgaatatgaggatccagacttcattaaccccattgttcatagc
atgaaaacaccagagagggatatgtccctgcaaatacctggtggaataaaggggcggtac
aattctttttgcagtgatgatgagcaattggatgatgaggattcttcccaatggcatgac
agtggcctcagtaccgtacaaggcagtgtttacctgcctgccactggcagacgggcttca
gcctgtcaagaagacagctctcagcacgctgccgtcatcaagatgggctggctggacaag
aatccacctcagggagccctttattaccagcgacgatgggtaaaactggatgttgactac
ctgagatactttgaaaatgacaaggacgtttattccaaggggatcatctcaacagcctac
attactaatgtgaccagtgtgggagagctcaagtttgaggtcgccacaaacaaccgaaca
tttatcttcagggctgaaagcgaagctgagagaaatgactgggtgactgtactacaggac
tgcaacagggggcgccatcgccgcaacaccatgagccctggcttgcttttgaccccagac
tatcagggctatttggagctcaaagggttgcgctccaaactttacactgtcatcgcctca
gataaggtctacctctacaaacacatagacgactttcgtattggagttggtatcacatcc
attgagatgaatgtaggaaatgttaaagactctgaacgtcgtaactttgatctcacaaca
ccctaccgcatattcagtttcatagcagagtccgatcagctgagggagcagtgggtggac
gccatgcggaatgccataggtgaggcgttgtccaatagcgaggtggcggaccggatctgg
gtggagtcaagcaacagtgtctgcgctgactgtgggactcccaagccggaatgggcggcc
atcaacttgtgcgtggtgatctgcaaacgatgcgcaggagagcacagaggactgggtcct
agcatctccaaggtccgtagtctaaagatggacaggaaagtctggacagaggagcttata
caggtgttccttttgcttggcaacgagcgggtaaacagtttctgggcagccaacatccca
ccaagcgaggccttgatgccctccagctgcagtgaagaaaggcgacgtttcatcaccaac
aaataccgccagggaaaatacagaaagtaccaccccctgtatggaaaccagagggagctc
aacaatgctctgtgtataaatgtgcagtgcaccgatgtgctcgagacattaagcctgatc
ttctgcggggccgatgtaaattgttcaactggtgtggcaagttggccctcccctctctcg
ctggccaacgcacactcccaactcttacaggctgagttactcagccacaatctcaacaca
gagctgccacaatcacatgtggacggggccatggaggcggtacattactcagcaccaccc
tgtgtgtctcacaatggcttcctattcaaaactgcatccatggctcgggctatctcggaa
cgaaagggcaaagaagagttcagtcgccgatggtgtgtgttgaatgatggcaccttcagc
tactatgagagtgacaagaactcgaaccccaacggagctctgaaagcttcagagattgtc
tgcttggctgtcgacgcacctgaaaaacatgggtatgaaaatacctttgaactctactct
gagtcagagcgtctctatctgtttggcactgatgatccagatggccacaaagaatgggtc
aagtctattgccaggaactttatcccagcctctgcagagcctttgctgaggcttggtttt
gagcggattgggcggctgaagtgtaaagacggcttgaacctgcaaacgtcaaaagttggt
tggtttgctctggtgggctccacactccacgcccatctggagaatggccagggggaggag
atccaccttcgtaaacttaatgaactctccatccaacaagacaacgaagtgctggtactg
gtggagaaaggcagaactctgtacatagagggagagaggaagttggattttagcggctgg
tgcacggccatccagacggcagcagggagcggaggagacacgctgggccagcagcagctc
acagagacggacataccggtcatcgttcacagctgcatcggctacatcactcagtgcggc
ttgacatctgagggaatctatcgtaagagcggtgtgaactcgcgggtggcagcgctgtta
gagagatttcgccgtgatgctcgcagtgttcatctcagggaaggagagcaccaggtggac
gacgtctccaacacgctcaagcgtttcttcagggagttagaagaaggactgttcacctca
gaggatgccagcacctggctcagtacagctgccattcaggatgaaagtaagaaaatctcc
cagtaccagctgttgttggacagtctgcctcgtgttaacaaggctacactacaagctctt
atcaaccacctctactgcgtgcaacgtttttctgagctgaaccaaatgaacctccacaac
ctggccatagtgtttggtcccacactgttccagacggatgggaaggactacactgctggc
cgcgccatagaggagcttatagagcactacacgctcatctttgaggtggatgagcagcag
ctaaagaagcagctggaggagatcactgttatcatccaagtgcgagagaaactaagcaca
aagtttcccagcactgagcctggaggacatttcatctgcacagtgtacctggaggaaaaa
aagaacacagcagagcaacatgttaagatccctggttctatgacggcagcagagttgaca
tgtgaggttctggaccggcgcaacatccccgttaaagacaaggagtattggagctgctgg
gaggtcagcaacaaggaggaaatggagcgtcctctgcaccacctggagcgagtcttaccc
atccttcactcctttggcaccgactcccatctgctcattaagaagcaccttgctatggaa
gccatgatcctctacctgacaagtaaagtggacgcatccaaacacgggatgatgaaattc
agagaggagcgaagcatcctgggattgggactgacctctggaagtttccatgaccgatat
ttcatcctcaactccaactcgctcaggatgtacaaggaagtccggagtaaccgcccagaa
cgtgactggcctgtgaagaatctcaaggtttacttaggcatcaagaagaaagtccgtcct
cccacttgttggggcctaacagtggtgtgtgagagtgtgaaacaagagaggccggagagg
cagcagtggtatctctgttgtgacacccagacagaaatgagggagtggttcgctactttt
ctcagtattcagtacgatggcaacgtgtggcctcaggacggactcaagctgacgcgggtg
agccgcgtgttgccggacacgcgtcatggtaacgtgtcactgataccgctgcgtggcagt
gagaatgagatgcggaacagcgtagcagctttcagccaagacgcgcttgctctctttaga
gatgttcgataa
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integrated database retrieval system
