Hippoglossus hippoglossus (Atlantic halibut): 117773864
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Entry
117773864 CDS
T07778
Symbol
arhgef12b
Name
(RefSeq) rho guanine nucleotide exchange factor 12 isoform X1
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Pathway
hhip04270
Vascular smooth muscle contraction
hhip04625
C-type lectin receptor signaling pathway
hhip04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
117773864 (arhgef12b)
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
117773864 (arhgef12b)
09153 Circulatory system
04270 Vascular smooth muscle contraction
117773864 (arhgef12b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hhip04131
]
117773864 (arhgef12b)
Membrane trafficking [BR:
hhip04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
117773864 (arhgef12b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
Motif
Other DBs
NCBI-GeneID:
117773864
NCBI-ProteinID:
XP_034461521
LinkDB
All DBs
Position
14:complement(3170327..3196009)
Genome browser
AA seq
1449 aa
AA seq
DB search
MSVTQSTLTDRTPNILNKEPTDKKAKNDKSPVSLKHEFDPTGLVQRCVIIQRDENGFGLT
VSGDNPVFVQLVKEDGAAMRAGVQTGDRIIKVNGTLVTHSNHIEVVKLIKSGSYVALTVL
GRPPGLPQIPLEEDEGEGDEGAELGSPSSLSVPHSPLLSGAEPCSPQEHSASPLPDGDES
KTTHSHKMDSLQKMLTKQQLDLEVKEEECSRNPRPKLVKEMQEAKKQISLLQEQISRGLQ
AVSRSGEEAEEGDNSGPPLREPTSSSWGDGVNDRLQMNSHSLHSSPLLGNPGKRETPCQS
PNIGRRDGLNLYSSPDAEDNTDTDSVAQCIVGSPPYLLNPQIIGAEDDYFDSQQEQINGQ
CSCFQSIDLLKTRPAHLAVFLHHVVSQFDPSPLLCYLYADMHKQTSSKESRRFFMEFHSL
FMDRTANLKLPLPETIAAELEKRRLELIPEELCKQYTQLLQDSLLPDLHKNLDDFRQKRS
MGLTLAEDELSKLDVDGGKDQQGLEKECSCAEHIISKIEDILLTSQPSEEEKCQTMQYVI
LTYMKHLGVKVKEPRGLEHKRARINFLPKIKKSIKPEREGEEKVKKPRFPNILGPPRRLS
RVDSTSVGKAVELSKQRSPKPLSQPAVCIPEQPDPSASTSSSGRIRGSLLSEGSDAGLHV
SPSTTSQSHSSPSAQASDTSGQDSDSNLSPFPVQPRLGEGLQCGDQQESVLSPTQFDFSP
SNLEQLQEEEQETFSRMEVPSAAATSTDIQSEDDQGGEAECEEDPLNWQALVSRGVLESL
TPQEIKRQEVINELFYTERAHLRMLKVLDCVFYQRLNRDGVLPPDDIKHIFINLEEIIQL
HVSITEQMTATRKRSETSVIGQIGDDLLAWFSEDEEEKIKRAVGTFCSNQPSALELIKNK
KKKDQRFNLFMQEAESNRLCRRLQLKDIIPVEMQRLTKYPLLLDNIAKYTEDGEEREKVK
KAGECCKKILNHVNQAVKEAENKQRLEEYQRRLDLSSLKQSENPMILELKNLDLTKRKMV
HEGPLSWKVNKDKTIELYTILLEDILVLLQKQDERLILKFHGKNPASVTDTKNIFSPIIK
LSTVLVRPVATDNKSFFVLSMSDNGAQIYELMAQTVSDQRMWQCLITQCADAMKAKPRHS
DSAPAQTDAERDAIEIINSGMNRPSKESNGTTSSRKDAISSPDTQAPPASIGPFNGLKSE
DEEEELAAAGRQEEEEDEELDEAELEAFLDGQLADRLPFLQQEGSRQGIAIESHELDELG
VPPSKAEDALRTLAVLKQALFNHMLSREAEEEKGETEELKPSGAPGCQRGDSLSGSHEGP
SVTCDESQTSSGSPPDDSQLPSEHAGLSETTECNGGFMVLDFGAGSEESSTDDNVVLEGD
VGIDMRKLLSSSSQTGGGGPNLSRQLMTHLRLLQADLQHLKEVELKYNELRQTHSDTTTD
SDDNNDGTQ
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtcacacagtccacactcactgacaggaccccaaacattctcaacaaggagccc
acagacaagaaggctaagaatgacaaatcccccgtctccctcaaacatgaatttgacccg
acaggtctcgtccagcgttgcgtgataatccagagagatgaaaatggcttcgggctgacg
gtgagcggagacaaccctgtgtttgtgcagctggtcaaagaagatggagctgctatgcga
gctggtgttcagacaggagaccggatcattaaggtcaacgggaccttagtcacacattca
aaccacatagaggttgtaaagctgatcaaatcgggctcctatgtggccctcacggtgctg
ggaaggcccccgggtctccctcagatccccctggaggaggacgagggtgagggtgacgaa
ggggccgagctcggttcaccctcgtctctctcggtgccgcactcccctttgctgtcaggt
gcggagccgtgcagcccccaggagcacagcgcctcccctctgcctgatggggatgagagc
aaaaccacacacagccacaagatggacagtttgcagaagatgctcaccaaacagcagctg
gacttggaggtgaaggaggaggagtgcagcagaaaccctcgaccgaagctggtgaaggag
atgcaggaggcgaagaagcagatctcgctgctgcaggagcagatcagcagaggtttacag
gctgtgtccaggagtggtgaggaggctgaggagggggacaacagtgggcccccgctgagg
gaacccacctcgtcctcgtggggggacggcgtcaacgacaggctccagatgaacagtcac
tctttgcacagcagtcccctcctagggaatcctgggaaaagagagacgccctgtcagagc
ccgaacatcggccggcgagacggactgaacctctactcgtcgcctgacgctgaggataac
actgacactgactccgttgcccagtgcattgtgggtagccctccctacctcctcaacccc
cagatcatcggagcagaagacgactactttgactctcagcaagagcagattaatggtcag
tgcagctgtttccagagcatcgacctgctgaagactcggccggctcacctcgctgtgttc
ctccatcatgttgtctcccagtttgacccttcacctctgttgtgttatctctacgctgac
atgcacaaacaaaccagctccaaagaaagtcgacgcttcttcatggagttccactcgctc
ttcatggaccgaacagcgaatctgaaacttccactgccggagacgattgcagctgaactg
gagaagcggaggctggagttaatcccagaggagctgtgtaaacagtacacgcagctgtta
caggactcgctgctgccggacctgcacaagaacctggacgacttcagacagaagcgcagt
atgggtctgactctggctgaggacgaactgtccaagctggacgtcgacggaggaaaagat
caacagggtttagagaaggaatgttcctgtgccgaacacatcatctccaagatagaggac
atcctgttgacgtcacagccgtcagaggaggagaagtgtcagacgatgcagtacgtgatt
ctcacctacatgaagcacctcggggtcaaagtgaaggagccgcgcggactcgaacataaa
cgagcacgaatcaacttcctgcccaagattaagaagagcatcaaacctgagagagaaggt
gaggagaaggtgaaaaagccccgattccccaacatcctcggtccgcccagacgcctgagc
agagtggattcaacgtcagtgggtaaagccgtggagctgagcaagcagcggtcaccaaag
ccgctctcccagccggccgtctgcatcccggagcagcccgacccctccgcctccacttct
tcctccggacggatccgtgggagtctgctcagcgagggatcggacgctggtctccatgtt
tcaccttccactacatcccagagtcacagctcgccctccgctcaggcctcggacaccagc
ggacaggactccgactccaatctgtctcctttccccgtccagcccagactgggcgagggt
ctgcagtgtggggaccagcaggagagcgtcctcagtcccactcagttcgacttcagcccc
tccaacctggagcagctgcaggaggaagagcaggagacgttcagtaggatggaggtgccg
agtgcggcggccacttcaaccgacatccagagcgaggacgaccagggaggcgaggcggag
tgcgaggaggaccctctgaactggcaggctctggtcagccgcggcgtcctggagagtctg
acgccgcaggagatcaaacggcaggaggtcatcaacgagctgttctacaccgagcgcgcc
cacctgcggatgctgaaggtgctggactgtgttttctaccagaggttgaacagagacggc
gtcctcccccctgacgacatcaagcacatctttattaacctggaggagatcattcagctg
cacgtttccataacagaacaaatgacggccaccaggaagaggagcgagacgtcggtgatc
ggtcagatcggagacgatctgctggcctggttcagcgaggacgaagaggagaagatcaaa
cgagcggtgggaactttctgcagtaaccaaccttcggctctggagctcatcaagaacaaa
aagaagaaagaccagaggttcaacttgttcatgcaggaagccgagagcaaccgtctgtgt
cgcaggctgcagctcaaagacatcatccctgtagagatgcagcgactgaccaagtacccg
ctgctactggacaacatcgccaagtacacagaggacggtgaggagagggagaaggtgaag
aaagctggtgaatgttgtaaaaagatcctgaaccacgtcaaccaggctgtgaaggaggcc
gagaacaaacagaggctggaggagtatcagaggaggttggatctctcgtctctcaaacag
agtgaaaaccccatgatcctggagctgaagaacctggacctgaccaagaggaagatggtg
cacgagggacctctctcctggaaagtcaataaagacaagaccatcgagctctacactatt
ctgctggaggacattttggttttgctgcagaaacaggacgagcgtctgatcctcaagttc
cacgggaagaatccggcgagcgttaccgacaccaagaacatcttcagccccatcatcaaa
ctcagcactgtactggttcgtcctgtggcaactgacaacaagtcgttcttcgtgctctcc
atgtcggacaacggcgctcagatctacgagctgatggctcagaccgtgtccgatcagaga
atgtggcagtgtctgatcacgcagtgtgctgacgccatgaaggccaaacctcgccacagc
gactcagctccagctcagaccgatgccgagcgtgacgccattgagatcatcaacagtggg
atgaacaggccgagcaaagagtccaacgggacaacgagctcaagaaaagatgccatctct
tctccggacactcaagctccaccggcgagcatcggcccctttaatggcttgaaatcagag
gatgaggaggaggagctggctgcggccggccgacaggaggaagaggaggatgaagagctg
gacgaagcagaactagaggccttcctggacggacagctggccgacagactgcccttcctg
cagcaggagggctcacgtcagggaatcgccattgaaagccacgagctggacgagctcggc
gttcccccgtccaaagctgaagacgctctcaggacgttggcagtgctgaagcaggctctc
ttcaaccacatgctgagccgggaggcagaggaggagaaaggggagacggaggagttaaag
cccagtggggcccccgggtgtcagcggggtgactccctgtctgggagccacgaggggccg
tctgtcacgtgtgacgagagccagacatcttcaggttcacccccagacgactcccagctc
ccgtctgaacacgcaggcctgtctgagacgaccgaatgcaacggtggttttatggtcctg
gacttcggcgcaggatccgaggagagcagcaccgacgataacgtggtattagaaggcgac
gtggggatcgacatgaggaagctgctgtcctcctcctcgcagacagggggcggtggtcct
aacctcagccggcagcttatgacccacctgcgcctcctacaggccgacctgcagcatctg
aaggaggtggagctgaaatacaacgagctgcgacaaacacacagtgacacaactactgac
tcggacgacaacaacgacgggacccagtga
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integrated database retrieval system
