KEGG   Hippoglossus hippoglossus (Atlantic halibut): 117773916
Entry
117773916         CDS       T07778                                 
Symbol
larp1
Name
(RefSeq) la-related protein 1 isoform X1
  KO
K18757  la-related protein 1
Organism
hhip  Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:hhip00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hhip03019]
    117773916 (larp1)
Messenger RNA biogenesis [BR:hhip03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     117773916 (larp1)
SSDB
Motif
Pfam: LARP1_HEAT La SGP
Other DBs
NCBI-GeneID: 117773916
NCBI-ProteinID: XP_034461650
LinkDB
Position
14:complement(11071796..11119260)
AA seq 1106 aa
MATQVEALLPGNPLAQAEEHGKVARGEPEEEEGGRGDGAKRQTGVDDQGSSSGGGGPGQG
GSPGAEEQTSKQATEEDKGGCDSEDKQTEEGVTGSRKEFTEAPPPKVNPWTRKMNAVTVV
SVNGQAHHESTGPAKVVKAGNPPKARRGGKVGDFADANSWPTPGEIATKDMQIEAVTRTV
SCPPTVRQVRDSTRFSVPKRTMTKKESKDKSNEESKENLKAKSDDSGEEKNGDDDSQKNG
PKKKGNKQKWVPLMIEVKSEGPRERSASRNNSRQNENPRLPPNARNDLRDWHSQKYEREW
RDDHDEVSSVKSEGAPFRGGFRGRGRGRGRGRGRGRGSGRGHYDYHYSYKSYDMKDGPHG
QKFGNAMTYYYDNMSSNDMFSVDQDLLKDYIKKQIEYYFSLDNLERDFFLRRKMDDEGFL
PIPLVASFHRVKALTTDVNLIMESLKDSKEVEVIDMKIRRKVDPEKWPLPGLNMPNNTHT
DFSQLINCPEFVPRQMPEEPQGSPRASTPVHQLKTEPDISNLKTMPKGLSASLPDLDSES
WIEVKKRPRPSPARPKVSTEKAPSLQQQQQQREKDELIRSPLLQPGSTPMPATSGNKDGA
EPDEPEELDFMFDEEMAQIDGRRNTFTDWSDEDTDGEIDDHDVNKILIVTQTPPYLRKHP
GGDRTGHHTSRSKLTGELVKVINDGLFYYEQDLWDDTYEPEYATIKQEVENFKKVHLISR
EEFECLTPEPPVDPKQEVPPGPPRPQQIPTDALANKLFGAPEPSSIARSLPTTVPDSPNY
RSARTPRTPRTPHRKDSTMTPRFYPVVKESRPVDAKTPRKRKTRHSSNPPMECHVGWVMD
SREHRSRTASVSSNASPSEGTPALGNIGCTPQSLPKFQHPSHELLKENGFTQHVYHKYRR
RCLNERKRLGIGQSQEMNTLFRFWSFFLRDHFNRKMYEEFRQLVVEDGKEGYRYGLECLF
RYYSYGLEKKFRPDIFKDFQEETMKDYEAGQLYGLEKFWAFLKYSKAKTMAIDPKLQECL
SKFKRLEDFRIDPPMEEGGRRRHSSSGDGRRRHPSQPSSRPHSQASSGPSPAPTAQGPTA
RDDAKPTSQKTPATAADPAPDTKTLK
NT seq 3321 nt   +upstreamnt  +downstreamnt
atggccactcaggtggaggctctcctgcctggcaatccgctcgcccaagccgaggagcac
gggaaagtggcccgaggtgagcccgaggaagaggagggcggacggggcgacggggccaag
cggcagacgggtgtcgacgaccaggggagcagctccggcggcggcggccccggccaggga
gggtcccccggcgcggaggagcagacctccaaacaggcgacggaggaggacaaggggggc
tgtgacagcgaggacaagcagaccgaggagggggtaacaggcagcaggaaggagtttact
gaagctcccccgcccaaggtgaacccgtggactaggaaaatgaacgcggtgaccgtggtc
agcgtgaatggacaagcacaccacgagtcgactggccctgccaaggtggtgaaagcaggg
aacccgcccaaagccagacgtggaggaaaggttggagattttgctgatgcaaacagttgg
ccaactccaggggagatcgcaaccaaagacatgcagatcgaggcagtgacacggaccgtg
tcctgcccgccgactgtcaggcaggtcagagactcaacgagattcagtgtcccgaaaaga
acaatgaccaagaaggagtcaaaggacaagagcaacgaggagagcaaggagaacctgaag
gccaagtcagacgactctggagaggagaagaacggcgacgacgactcccagaagaacggc
ccgaagaaaaaaggaaacaagcagaagtgggttcccctgatgatcgaggtgaagtccgag
ggtcccagggagcgctcggcctccaggaacaacagcaggcagaacgaaaacccccgcctc
cctcccaacgccaggaacgacctcagagactggcacagtcaaaagtacgagcgtgagtgg
cgtgacgatcatgacgaggtgtcaagtgtgaagagcgaaggggcgccgttccgcggtggg
ttcagaggtcgtggacgtggaagaggaagaggccggggacgaggcagaggtagcggtaga
ggccactacgactaccactacagctacaagtcctacgacatgaaggatggaccccacggt
cagaagttcggcaacgctatgacctactactacgacaacatgagcagcaacgacatgttc
tccgtcgaccaggacctgctgaaggactacatcaagaagcagattgagtactacttcagc
ctggacaacctggagcgggacttcttcctgcggaggaagatggatgatgagggcttcctg
cccatcccactcgtcgccagcttccacagagtgaaggccctcaccaccgacgtcaacctc
attatggagtctttgaaggacagtaaggaagtggaggtgatcgacatgaagatccgtcgg
aaggtggaccccgagaagtggcctctcccgggcctgaacatgccaaacaacacccacacc
gacttctcccagctcataaactgccccgagtttgtcccgagacaaatgccagaggagccc
caaggttctccaagggcctctacaccagtgcaccaactgaagactgaaccggacatctcc
aacctcaagacgatgcctaagggcctctccgccagcctccctgacctggactccgagtcc
tggatcgaggttaagaagaggcccagaccctccccggccagacccaaggtcagcacagag
aaggccccctcgttgcagcagcagcagcagcagagggagaaggacgaattgattcgttcc
ccgttgctgcaacccggctccacaccaatgcctgctacctcaggaaataaggacggagcc
gagccggacgaaccggaagagctggacttcatgttcgatgaggagatggcgcagattgac
ggccggcgcaacaccttcaccgactggtcggacgaggacacggacggcgagatagacgac
cacgacgtcaacaagattctgattgtgacgcagacgccgccctacctgaggaagcaccca
gggggcgaccgcacaggacaccacacgtcgcgctccaagctgaccggcgagctggtcaag
gtgatcaacgacgggctcttctactacgagcaggacctgtgggacgacacgtacgagccc
gagtacgccaccatcaagcaagaggtggagaacttcaagaaggtccacctgatcagccgc
gaagagttcgagtgcctgacccccgaaccccctgtcgaccccaaacaggaagtcccgcca
ggcccaccccgacctcagcagatccccacagatgctttggcaaacaaactcttcggtgcc
cctgagccctcctccatagctcgctctctcccgactactgtgcctgactcacccaactac
cgcagtgcccggacgccacgcacgcctcgcacccctcaccggaaggactccaccatgacg
ccgcgcttctacccagtggtgaaggaaagtcggcctgttgatgccaagacgcccaggaag
aggaagacccgacacagctccaacccgcccatggagtgtcacgttggctgggtgatggac
tccagagagcatcgctcacgtacggcctctgtcagctctaacgccagcccatcagagggc
actcctgccctgggtaacatcggctgcaccccccagtccctccccaagttccagcacccg
tcacacgagctgctcaaggagaacggcttcacgcaacacgtttaccacaagtaccgccgg
cgctgcctaaatgagcgaaagcgactgggaatcggccaatcgcaggaaatgaacacactc
ttccgtttctggtcctttttcctgcgagatcatttcaacaggaagatgtacgaggagttc
agacagctggtggtcgaggatgggaaggaaggatacaggtacggtttggagtgcctcttc
aggtactacagttacggtctagagaagaaattcagaccagacatttttaaggatttccaa
gaggagaccatgaaagactacgaggctggtcagctttatggactggagaagttctgggcc
ttcctcaaatactccaaagctaaaaccatggcgatcgatcccaagctgcaggagtgtctg
agcaagtttaaacgtctggaggatttcaggatcgatccgcctatggaggaagggggtcgc
agaagacactcgtccagcggcgacggtcgccgcaggcacccatcccagccctccagtcgg
ccccacagccaggccagctcaggccccagccctgcccccaccgcccagggccccacagcc
agggatgatgccaaacccaccagtcagaaaacccccgccacggccgctgaccccgcaccg
gacaccaagacgctgaagtaa

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