Hippoglossus hippoglossus (Atlantic halibut): 117773994
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Entry
117773994 CDS
T07778
Name
(RefSeq) collagen alpha-1(XXVIII) chain-like isoform X1
KO
K23619
collagen type XXVIII alpha
Organism
hhip
Hippoglossus hippoglossus (Atlantic halibut)
Brite
KEGG Orthology (KO) [BR:
hhip00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hhip01002
]
117773994
Peptidases and inhibitors [BR:
hhip01002
]
Peptidase inhibitors
Family I2: Kunitz - BPTI family
117773994
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VWA
Collagen
VWA_2
Kunitz_BPTI
VWA_CoxE
DUF5585
Motif
Other DBs
NCBI-GeneID:
117773994
NCBI-ProteinID:
XP_034461867
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Position
2:complement(8950729..8972555)
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AA seq
1228 aa
AA seq
DB search
MVPSLLWLLMLGGLQGLWAQDYDEDYEEEVVTIKKKNKLYPSNSIPEKSKTLNDENCGLE
LAFLIDSSESAKDNHAQEKDFALEVMNRLQGLRLQTGRSLTSRAALLQYSSHVIIEQTFK
QWRGIEDFKARLAPIVYIGHGTYTTYAITNLTRIYLEESDVSSIKVAILLFDGVSNPRNP
DIFSAVADAKNQGVRFFTIGITPEANEAANIAQLRLVASSPASRYLHNLQDSGIVEKVIK
EITALADEGCPLALSTCACDKGERGPGGPPGKKGRPGEDGSNGSKGQKGEGGLSGLPGRE
GTEGKSGYKGEQGERGECGTPGIKGDRGPEGNVGPRGNRGPQGLPGPHGDIGPEGVMGKK
GERGLLGPPGIQGETGIGLPGSKGDVGFQGPLGLPGPPGLGELGPPGPQGQQGVQGERGS
LGEGLPGPKGERGLDGPRGPRGQPGAGIKGDKGDFGSPGLPGPRGLPGLGIQGEKGVEGP
RGPLGGRGPQGEGMPGSKGDQGLPGEVGAPGERGSGDPGAKGEPGSTGTSGLPGLPGEDG
APGQKGEPGASGLRGLEGATGIGTQGEKGDQGQRGIRGLTGPPGIAGPSGPKGEPGTQGR
GGPPGPQGRFVVGPKGDLGPNGPPGPVGENGYGLPGPKGDRGDSGPAGPFGPKGDGYPGP
TGPPGLPGLTGEPGQEGVGVPGPKGDIGFRGLPGLPGPPGEGLQGPLGNPGRPGPSGPMG
PHGQGVQGPKGEHGPQGVTGPRGLPGEGFPGAKGDRGSAGERGLKGIGGDMGDPGTPGQT
GRSGIKGEAGLTREDIIRMIKEICGCGIKCKERPMELVFVIDSSESVGPENFEIIKNFVS
ALVDRVTVGRNATRIGLVLYSLEAKLMFNLARYVSKQDIKQAIGTIPYMGEGTNTGTAIR
KATQEAFYSSRAGVSKVAIVITDGQTDKREPVKLDIAVREAHAANIEMFALGIVNTTDPT
QAEFLRELNLIASDPDAEHMFPIDDFNTLPALESKLVSRFCEDENGALIYNRITNGYNGY
GNNGYNGNRNGINGKFANGGYGNRPVTEEGAASGRQTGTGSHSHGGGVDSTRHGIKGSST
THGGGGGGGGGGGGGRGQHVHTETTNRGTERGDTFNRETIDPSGGDSTRRRGSSSSSSSS
TNVTTSSSGGSVSAPRPALPRETVPLDPRCGLALDQGTCRDYNIRWYYDKQANACAQFWY
GGCNGNKNRFDTEEECKRTCVIPRSTGG
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atggtcccctcactgctctggctcctgatgctggggggacttcagggtctttgggcacag
gactatgatgaagactatgaagaagaggtggtgaccatcaagaaaaagaacaaactatat
ccatccaactccataccagaaaaatccaaaacgctcaatgatgagaactgcggattggag
ttagccttcctgattgacagctcagagagcgccaaggacaaccatgcccaggagaaggac
ttcgccttggaggtgatgaaccgactgcagggcctccggctgcagaccggccgcagcctc
acgtcccgtgcggcgctccttcagtacagcagccatgttatcatagagcagacctttaaa
cagtggagaggaatcgaggacttcaaggcccgactcgctccaatcgtgtacatcggtcat
ggcacctacacgacctacgctatcaccaacctcacccgcatctacctggaggagtcggac
gtcagcagcatcaaggtggccatcctgctcttcgacggcgtctcaaaccccaggaatcca
gacatattttcagctgtggctgatgccaagaaccagggcgtgcgtttcttcaccataggc
atcacacccgaagccaatgaggcagccaacatagctcagctgcggctggttgctagctcc
cccgcctcccgctaccttcacaacctgcaggacagcggcatcgtggagaaagtcattaag
gagatcacggcgctggcagatgaagggtgtcccctggccctgagcacgtgtgcgtgtgac
aagggagagaggggccccggcggccctcctgggaagaagggccgtcctggagaagacgga
agtaatggttcaaaaggacagaagggtgagggtggtctcagtggacttccaggtcgtgaa
ggaacagaggggaaatcaggatacaaaggagagcagggggagagaggggagtgtgggaca
cctggaattaaaggagacagaggtcctgaaggaaatgttggcccgagaggaaaccgtggt
cctcagggtttgcctggtccacatggtgatatcggccctgaaggagtgatgggtaaaaaa
ggggaaaggggacttcttgggccacctggaatccaaggggaaactgggatcggccttccg
ggatccaagggtgatgttggtttccaggggccactagggctccccggtcctccagggctc
ggcgagttgggaccaccgggacctcaagggcaacagggagtccaaggtgagagaggatca
ctgggagaaggtctccctggcccaaagggagagcgaggcctggacgggccacgagggccc
agaggacagccgggcgctggaattaaaggagacaagggggattttggatctccaggtctt
ccaggaccccgcggacttccgggcctgggcatacagggtgagaagggggtagaaggacca
agggggccactaggaggcaggggcccacaaggagagggcatgcctggttccaagggagac
caagggttgccaggcgaagttggcgctccaggggagagagggtctggagacccaggagct
aagggtgagccgggatcgacagggacgtcgggtctgcccgggctgccaggagaggacggg
gcccctggacagaaaggggagccaggagcttcaggtctcaggggcctagagggggcaact
gggatcggcactcagggggaaaagggtgaccaaggccaaagaggaataagaggtttgacg
ggtccacctggcatcgctggaccctcaggaccaaagggagaaccaggaacacaaggcagg
gggggtcctcctggtccacaaggacgtttcgttgttggacccaagggggatctcggcccc
aatggtcctcctggtccggttggggaaaatggctatggacttcctggtccgaagggggac
cgtggagattcaggccctgcaggtccatttggtcccaaaggagacggctaccccggcccc
acaggccctcctggtctgcctggactcacaggagaacctggccaagaaggagtgggcgtc
ccgggaccaaagggggatattggtttccgggggctgcctggtttaccaggacctccgggc
gaaggactccaaggacctctgggtaaccctgggcgacctgggccatcggggccaatgggg
ccacatggacaaggagttcaagggccaaagggggaacacgggccccagggcgtgaccggg
ccgagggggctgcctggagagggctttcctggagctaaaggggaccgtggctcggccggg
gagagagggttgaagggaatcggaggtgatatgggagatcctggaaccccggggcaaaca
ggccgatctggtatcaaaggtgaagctggactcaccagagaggacatcatccgaatgatc
aaagagatctgtggatgtgggatcaagtgtaaggagaggcccatggagctggtgttcgtc
atcgacagctcagagagcgtgggtccagagaactttgagatcatcaagaactttgtgagc
gcactagtcgaccgggtcacggtgggccgcaacgccaccaggatcggcctggtgctgtac
agcctggaggcgaagctgatgttcaacctggctcgctacgtctccaaacaggacatcaag
caggccatcggaaccatcccgtacatgggagagggcacaaacacgggcacggccattcgt
aaggccacacaggaagccttctacagttcgcgtgcgggagtcagcaaagtggccattgtg
attactgacggccagacggacaaacgggagccggtcaagctggatatcgcggttcgagaa
gcacacgccgccaatattgagatgtttgctctggggatagtgaacaccacagacccaaca
caggccgagttcctcagagagctgaacctgatcgcgtctgacccggacgccgagcacatg
ttccccatcgacgacttcaacactctgccagctctggaatccaagctggtcagccggttc
tgtgaggacgagaacggagccctgatatacaacagaataacgaacggctacaacggctat
ggaaacaacggctacaacggcaacaggaatggcattaatgggaagttcgccaacggcggc
tatggaaaccggcctgtgaccgaggagggagcagcgagcggccgacagactggcaccggc
agccacagccatggaggcggagtggacagcacacgacacggcattaaaggatccagcaca
acacatggcggaggaggaggaggaggaggaggaggaggaggaggaagagggcagcatgtg
cacactgaaacaacaaacaggggaacagagcgtggggacacatttaaccgtgaaacaata
gatccttccggaggggactccaccaggaggcgaggatcatcttcatcatcgtcgtcttct
acaaacgtaaccacatcatcctcaggtggatctgtatctgccccaaggccggcgctcccc
agagagaccgtccccttggacccccgctgtggcctggctctggaccagggcacgtgtcgg
gattataacatccgctggtactacgacaagcaagccaacgcctgcgcccagttctggtac
ggaggctgcaacggcaacaagaaccgcttcgacacggaggaggagtgcaagaggacgtgc
gtgatccccagatccaccggcggctga
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